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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                          --------->ARR14(2)
                          <---------ARR14(2)
                         <---------GLK1(1)
                         <----------TaMYB80
                         --------->GLK1(1)
                        ---------->TaMYB80
              --------->ARR14(2)               <---------AHL20(2)
              <---------ARR14(2)              <---------YAB1
        <---------YAB1  <---------ARR14(2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
  <---------AHL20(2)    <-----------ARR10  --------->AHL20(1)                                <------
 <---------AHL20(1)     --------->ARR14(2) --------->AHL20(2)                     <----------DOF2
 --------->AHL20(1)  <---------ANAC46--------->AHL20(2)                <---------TOE2(3)     -------
<---------AHL20(2)  --------->At4g35610    <---------AHL20(2)         <-----------GT1       --------
------->AHL20(2)------>ZmHOX2a(2)    <---------AHL20(2)--------->MYB52(2)      <-----------GT1
>YAB1 --------->YAB1<---------At4g35610   --------->AHL20(2)      <----------DOF2 <---------DAG2  <-
 
tatatatatttataatggatcggagcggatatccacctatttaaattttattatttgttatttgctctgcttttaacgaatattacttttcaatatttaa  13326500
                        <---------ARR11(3)
                        <---------GLK1(2)                                                   --------
                        <---------ARR14(2)                                                  <-------
                        --------->ARR14(2)                                                  --------
                  <---------ARR14(2)                                                        <-------
                 --------->GLK1(1)                                                          ------->TEIL
                 <---------GLK1(1)                                                         <--------
                <---------ARR14(2)                                                       --------->ANAC58
                --------->ARR14(2)                                                   --------->ANAC58
    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             --------->AtLEC2
 --------->TOE2(3)--------->ARR14(2)                                        <---------AHL20(1)
---AHL20(2)  <---------ANAC55(2)                                            --------->ARR11(3)
-->AHL20(2) <---------LBD16 <-----------GT1                        <---------MYB52(2)--------->ANAC58
->AHL20(2) --------->MYB52(1)                           <------ZmHOX2a(2)   --------->AHL20(1) <----
----------GT1<---------ANAC46                     --------->MYB52(1) --------->MYB52(1)  --------->ANAC58
 
tttacctcatacacttacggatatccagatttttcgaatcaaatcgaaccgaataacggatcaaatcgaaactaacaaatattttgccaagcacgaatct  13326600
                                                                                                  <-
                                                                                                  --
                                                                                           ------>NtERF2
                                                                                          <---------ETT(2)
                                                                                         <------NtERF2
                                                                                        <---------ATERF1(1)
                                                                                        ------>NtERF2
                                                         ------>ZmHOX2a(1)             --------->DEAR3(1)
                                                  <---------YAB1                       --------->At1g77200
       <-----------ARR10                        --------->YAB1                         ----------->HVH21
   <---------HSFB2a(2)                          -------->HAHB4                        --------->ATERF1(1)
   --------->HSFB2a(2)                          <---------ICU4                        <------NtERF2
->ARR14(2)                                     --------->ICU4                         --------->RAP2.3(1)
--ARR11(1)               <----------DOF2     --------->YAB1                           --------->DEAR3(2)
->GLK1(2)         ------>ZmHOX2a(1)          <--------HAHB4                          <---------ATERF1(1)
--ARR14(2)        --------->LBD16           <---------AHL20(2)                      <---------DEAR3(1)
-CCA1(2)        ----------->RAV1(2)         <---------YAB1                 ------>ZmHOX2a(1)    ----
------DOF2   <---------At4g35610          --------------->AGL15           --------->TOE2(3)---------
 
ttagttcgcgaatttaagctcctggttactttcttctagggttttctataattatgattcctctcgtctattctagtccttaattagtcgccgacgacaa  13326700
                                                        <---------ATHB12
                                            --------->ARR11(3)
                                            <---------ARR14(2)
                                            --------->ARR14(2)
                                            <---------ARR11(3)
                                           --------->GLK1(1)
                                <---------MYB52(2)    --------->WOX13(1)
                               --------->ANAC58     <---------ATHB12                              <-
---------ID1               --------->ANAC58<---------CCA1(2)                                  <-----
--------->GT1              --------->ANAC58<---------GLK1(1)                             <----------
------>DOF2     ---------->DOF2--------->ANAC58     ------------>CBF                  <----------DOF2
-->RAV1(1)  --------->TOE1(2)  --------->ANAC46    --------->ANAC46   <------------------------ANAC81
 
aaagaaaaaaaaaaacctagaaagcttgacaaacaaggaacgacgcatatctccaaacaatcagtgtaatttctgtgattctctgtttccttttgttgtg  13326800
         --------->GLK1(1)                                                         <------ZmHOX2a(2)
         <---------GLK1(1)                                                        <-----------HVH21
         <---------RVE1(1)              <------MYB46(1)                         --------->LBD16
        <---------ARR14(2)           <---------MYB52(1)                       <---------LBD16
---------DOF2         ------>ZmHOX2a(1) <------MYB83 ----------->HVH21  <---------WRKY38(1)        <
----ANAC46           --------->TOE2(3) <---------AtMYB61               --------->WRKY18(1)         -
-RAV1(1)--------->ARR14(2)      --------->YAB1    <---------ZAT6     --------->WOX13(1)         <---
 
tctttgattcggatatttgtttatcctcaagtctttcatcgtttggttttgtagtgttgacatggacatcatcagtcaatgtccggatcacttgctcttg  13326900
                                    <---------TGA1a                         <---------ANAC58
                                    <---------O2               ------>ZmHOX2a(2)
                                    =================bZIP_DOF <------ZmHOX2a(2)
                                    =========================================bZIP_DOF
                                    ==========================bZIP_DOF      <---------ANAC58
                                    --------->O2              --------->GLK1(1)
                        --------->ARR11(3)                    <---------GLK1(1)
                    ---------->DOF2 --------->TGA1a          <---------ARR11(3)
               <----------ID1   <-----------TGA1             --------->ARR11(3)
    <-----------HVH21   <---------ARR11(3)<----------DOF2    --------->ARR14(2) ----------------->AGL1
---------ARR14(2)   ==========================bZIP_DOF       <---------ARR14(2) <------NtERF2
-------->ARR14(2)  <XXXXXXXXXXXXXXXXXXXXXMIR447C        --------->ALFIN1   <---------MYB46(3)
------ANAC46   <---------ETT(1) <-----------HVH21  ---------->DOF2<----------DOF2             <-----
 
cgaatactgtcatttattccgacaaaagatgtcatcgtcacgagtcttttgtccaaaagatggggatctctttggagatgggtgccaaaacttgaatatg  13327000
                                                                                 <---------At4g35610
                                                                                 --------->At4g35610
                     <---------ANAC58                                           ------->TEIL
                   --------->GLK1(2)                                       <---------ANAC58       <-
    --------->ANAC46 <---------ANAC58                  --------->MYB52(1)  <---------ANAC58       --
    --------->ANAC58 <---------ANAC46                  <-----------GT1   <---------ARR11(3)      ---
    --------->ANAC58<-------TEIL          <----------DOF2           <---------HSFB2a(2)        <----
<-----------GT1   <---------GLK1(2)    <---------ARR11(3)           --------->HSFB2a(2) --------->YAB1
----YAB1     --------->TOE1(2)         --------->ARR11(3) ------->GAMYB  --------->ARR11(3)   <-----
 
attttacaagacaaaacatgagattcgtgaagtttgtttacaggtctttgctacagaataacgctccagttctcgagagcttgcatctcaagaatattat  13327100
                                                                    --------->At4g35610
                                                                    <---------ZAT2
                                                                    --------->ZAT2
                      <---------ARR11(3)                       <---------ANAC46
                  --------->LBD16                              <---------ANAC58    <---------AHL20(2)
            <---------ANAC58                                   <---------ANAC58    --------->AHL20(2)
     <---------YAB1 ----------->ARR10                    <---------ANAC46       <---------------AGL15
   --------->At4g35610<---------ARR14(2)                 <---------ANAC58       --------------->AGL15
   <---------At4g35610--------->ARR11(3)                 <---------ANAC58  <---------HSFB2a(1)
---------DOF2<---------SPL7                           <---------DEAR3(1)   --------->HSFB2a(1)
---->ZmHOX2a(1)  <---------ANAC46                     <---------RAP2.3(3)  <---------HSFC1(2)
------>TOE2(3) --------->SPL7           --------->ARR11(3) --------->ALFIN1--------->HSFC1(2)
-----YAB1   <---------ANAC58   <------ZmHOX2a(1) <---------MYB52(1) <---------At4g35610
------GT1  <---------------AtSPL3    <---------WOX13(1) <------NtERF2  ----------->GT1
 
cctttatgctgaatgtcgtaccgtagatattggaggatggattgatattgcagttagtcggcgtgtgcgtgagctggaaatttctattaattgttcggat  13327200
                                    --------->ANAC58
                              <-------MYC3                                                  <-------
                              ------->MYC3      <-------TEIL --------->AHL20(2)         <----------DOF2
        <---------WOX13(1)<-------TEIL       --------->At4g35610 <---------ICU4       --------------
     <---------YAB1<---------ANAC46 --------->ANAC58   --------->ANAC46            --------->KAN4(2)
 
gaaaaattcagattgcctagtagcctatatacatgtggaacgcttgagagcttcatactcaccattaaacattgccatcttgtggatgttcctttagcgg  13327300
                                                    ------->GAMYB
                                                    <XXXXXXXXXXXXXXXXXXXXMIR399B/C
                                          <---------ANAC46
                                         <------MYB83
                                         <------MYB46(1)                        --------->ZAT18
                                      ----------------------->TaNAC69(2)      <--------P
                                      <---------ANAC58                       <-------GAMYB
                                     --------->ATHB12                        <---------MYB52(1)
                                     --------->MYB55(2)                     --------->LBD16
                                     <---------MYB46(3)                   <---------LBD16
                                    <---------AtMYB61                   --------->ARR14(2)
                             <---------ANAC46      --------->ANAC58     <---------ARR14(2)
                      --------->REM1(1)<--------P  --------->ANAC46     <-----------GT1
--At4g35610           <---------ALFIN1<---------ANAC58                 <---------CCA1(2)
--->AGL1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->ANAC58   ----------->ARR10
 
tctgtctcccttccctcaaaaaactacaccttaggtgtattggttgggcatacaacgcaactcttcttaggcttatatccggttgcactaatcttgaaga  13327400
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AGI:  At4g26350.1   
Description:  F-box family protein. Identical to Putative F-box/FBD/LRR-repeat protein At4g26350 [Arabidopsis Thaliana] (GB:Q9STQ0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G26340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566)
Range:  from: 13326862    to: 13328324    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.