Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                                              <------NtERF2                                                                           ----------->RAV1(1)                                                                          --------->PCF2                                                                    <------------ATHB5 ---------->DOF2           <-------TEIL                             -------->ATHB1                 <-   aaccaaagtgtttctaataaacttggccgtgcattgaaccacggagttccaaaatcaatgtctgtttaaatcattggccccagaatttgaactacacaca  19325200          <-------TEIL ----------HVH21     <-------GAMYB             ----------->GT1   gagtcacagacattcattacgatggttgaatgaaatggtcttgactaagaagtaagaacaactatgcacaattgagaaactattagctcgatttccagaa  19325300                              ------>ZmHOX2a(2)                           <------ZmHOX2a(1)                 ---------->DOF2        ----------->GT1 <-----------RAV1(2)    ---------->DOF2                           ----------->GT1   actatcactatcgtaatataaaagtcccaggatcgaccaaatcggacgagaaagactcaatgaagaaaccccataaaaacatggtcgaagtcagtataaa  19325400                                                                                                   <-                                                                                                  xxx                                                                                                 xxxx                                                                                      ----------->HVH21                                                                                    --------->ALFIN1                   <-------GAMYB       <------ZmHOX2a(1)                   <-----------RAV1(2)  <----                 <------NtERF2    <------ZmHOX2a(1)                        ---------->CDC5      xxxxx   caaaatcaagagtttggtcgtcgttgtggatttggaggagaggagagtgagcttacagagtatgagaagcgagaagctcaggggaagtgtgactcgtcgt  19325500                                            ----------->GT1                                 ------>ZmHOX2a(2) -----NtERF2                     ====================================HOX2a_HOX2a xxxxxxxxxxxxx>smallRNA(i)      <------ZmHOX2a(2)                      <----------DOF2 xxxxxxxxxxxx>smallRNA(i)       =====================================HOX2a_HOX2a --NtERF2                      --------->AGP1             ---------->DOF2 xxxxxxxxxxx>smallRNA(i)       <---------AGP1          *TSS   <------ZmHOX2a(1)                    --   cgtcgtcttcgaagtcactcacgaccatcgagagatctgatgattttggtaaaatatcaaaaaaggacttcaacttttcacttaagtcaaaacaagcccc  19325600                                            <-----------RAV1(1)         ----------->GT1                                          <----------DOF2   ----------->GT1 --------->TBP                       <-------TEIL        <------ZmHOX2a(1)      <-----------GT1   tataaataaattctgttatttaagccttgaggcttgagctgcgtctttgttgttcactaggagagttatttgagcggataatttactaaaactgaatgtc  19325700                                                                               ---------->DOF2                 <-----------GT1    ---------->DOF2                 ----------->GT1          <-------   catctcccaaacaaacattttacgttttcatgttatataaaagaatactatatcgttagctagaatattgtagttaaatattaaagtagtgtattttaca  19325800                  <----------DOF2                                            <------ZmHOX2a(2)             ---------->ID1                                           ---------->DOF2 ----GT1 <----------DOF2               ----------->GT1         ----------->GT1------>ZmHOX2a(2)   ttttgtctgaactttgtcatctttgtttcatgaatggtcaatggtgaataatggggagagaaggaacgtgaataaagggatccacaagtgtctccaccat  19325900                                                                  <----------ID1                                                          ----------->GT1                           <                                                    ---------->DOF2     ---------->DOF2             =                      <----------DOF2            ----------->GT1  ----------->GT1              ------                      ------>ZmHOX2a(1)        <------------CBF ---------->DOF2                ======   tttctgagtaaaaacaatcacatcctttcattttcaaacccctaaaccaaattgtaaagtcagaaaaaaagaaaaaaagaaacacacatacaaatcgaaa  19326000                        ---------->DOF2                     *TSS                    ------------>CBF                --------->TGA1a                ===================bZIP_DOF                --------->O2                <---------O2 ----------DOF2 <---------TGA1a =========================bZIP_DOF ---->DOF2    <---------ALFIN1                                                                  <---- =========================bZIP_DOF  <-----------------AGL1  ---------->DOF2   ----------->RAV1(1)   agcttttcttcatctcccacgttacaataagccctaagaacgaataaggcaactacagagagaaaagatgaattcaactacaacaaaaaacgtttgtgga  19326100  Previous    Next  AGI:  At3g52072.1    Description:  other RNA Range:  from: 19323662    to: 19325555    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52080.1    Description:  CHX28 (cation/hydrogen exchanger 28); monovalent cation:proton antiporter. similar to ATCHX15 (cation/hydrogen exchanger 15), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT2G13620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40816.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 19326021    to: 19328821    Orientation: Forward Links:  TAIR  MIPS