Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100       ------->TEIL                                         <------ZmHOX2a(1)                   <------   gtccatgtacctgcattacatgaaacaaacgaagaacaaaatcagaaacacgaagaagtaggagctctatgaaaccaaaaacttcaactaaatggataca  3622400                                                            ----------->HVH21                         --------->ALFIN1           ------>ZmHOX2a(2)                     ---------->DOF2               <------ZmHOX2a(2)                <----------ID1                    <---------AGP1                ----------->GT1                   --------->AGP1     ------>ZmHOX2a(2)           ---- -TEIL       ---------->DOF2                    ----------->ARR10----------->HVH21               <---   gagaaattagaaatcaaaaggaaaaaagtggcgaagagaacttacttcttgagatctggaggctgacctgatcgactcatacttgcagaatcggagaaga  3622500                                                                                        <---------TGA1a                                                                                        --------->TGA1a                                                                                        <---------O2                                                                                       ----------->STF1                                                                           ----------->GT1                                                                         ---------->DOF2--------->O2                                                                         =========================bZIP_DOF ------->GT1                                                       ---------->DOF2   ----------->TGA1 -------ID1                          <----------DOF2               ===============================bZIP_DOF   cgaaaaacgagagcttagggtttttctcagctacgaacactttactcgattgattccagtctccagagcgaaagagaaagaaaaaaaatgacgtcggtct  3622600                      <-----------HVH21                             <-----------HVH21             ---            *TSS <---------ABI4(2)                ----------->HVH21<----------DOF2          ---------         --------->ALFIN1           <------------CBF         ---------->DOF2            ---------->DOF2   gcaaaactagagtggtcgaagcaccgtcgtttcaagcccattgttaatgggtttgaccgcaaaaaaagcctttcacatgtttcaaaacataaaagtaggg  3622700                                                                          --------------->AGL15                                                                          <---------------AGL15                                                                       <-----------GT1                                          <-----------ARR10  <---------ALFIN1                                      <xxxxxxxxxxxxxxxxsmallRNA(s)   *TSS----------------->AGL3                            <---------ALFIN1         <xxxxxxxxxxxxxxxxsmallRNA(i)                   <---------PCF5  <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->ALFIN1 ------>ALFIN1    <xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxsmallRNA(i) >ALFIN1         <xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxsmallRNA(s)               <------   gtgttccgagaatcgaactcgggacctctcgcacccgaagcgagaatcataccactagaccaaacacccggtgttactaattagagatatttagtcattt  3622800                                        <-----------GT1 <-----------GT1 ------------>CBF----------->GT1                          ---------->DOF2    -------- -----TBP       <-----------GT1<------------CBF                      ----------->GT1     ---------->DOF2   atattactaaattatttataacaatttatcttgaattgtgattacccatccaaaattatctgaattacatgtagtcaaaagccataaaactaaaagaaag  3622900                                         <------ZmHOX2a(1)                                  ------>ZmHOX2a(1)  <---------ALFIN1              <-----------------AG              ------>ZmHOX2a(1)    ---------->DOF2 -->DOF2          <-----------GT1<---------------AGL15----------->HVH21      ---------->DOF2      <--   atacccactgcatcaattaattaccaaacctttctccttactaggaaatattgcctgtgatatggctcctcatagagactaaagaacataaaagagcatt  3623000                                                                                                    -       <-------TEIL                ------->GAMYB                                                <---- --------DOF2                   ------->GAMYB          <------ZmHOX2a(1)                     --------   ctttaaacatccatgttgtttatgtcttcgataacaaccaagagcatcaagaaatgaggatatgatgagttttaagtcattgcaagaggctataagtggg  3623100 ---------->HVH21                                                      --------------->AGL15 -----PCF2                                                             <----------DOF2 ->ALFIN1                ---------->CDC5                               <---------------AGL15---------   gtctgatgcttataatgcactaacagctcagggctaataagaaatatatgatcataatctgctaatctgttttctttttcttgcaagagatgccattcaa  3623200 >AtLEC2                          ---------->DOF2            <----------DOF2          ----------->GT1   cacaatctaagcgataacattctaatcaagaattccaaaagccggacttgggatatttgatgtctttatcatacaatctctcgtatagttgttaattgca  3623300  Previous    Next  AGI:  At3g11500.1    Description:  small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative. Identical to Probable small nuclear ribonucleoprotein G [Arabidopsis Thaliana] (GB:O82221); similar to SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G) [Arabidopsis thaliana] (TAIR:AT2G23930.1); similar to unknown [Populus trichocarpa] (GB:ABK93558.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920) Range:  from: 3621415    to: 3622612    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11505.1    Description:  pre-tRNA. tRNA-Pro (anticodon: CGG) Range:  from: 3622698    to: 3622769    Orientation: Reverse Links:  TAIR  MIPS