Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                                                     <-----------GT1 >ZmHOX2a(2)     <-----------GT1                       -------->P       ----------->RAV1(1)     -----   tattcaatcttaagatatttcacgaatcaatcagataacattcgaaaaccactcagctaccataagtaataaaacaacagtgattaaaccgattctctta  3607900                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                    ------->GAMYB                  -------->P             ===================HOX2a_HOX2a             ------>ZmHOX2a(1)                                                -------->P<-------GAMYB --->P       ====================HOX2a_HOX2a   ------>NtERF2 ------>NtERF2  <---------ALFIN1  -------   ccagaaactgagctcctagtaaccccgatccgttggtcggaagctgctccggctattacttgccgcgcgagcttccctccaacctacggcggttgagaaa  3608000                                                          <---------------AGL15                                   <------ZmHOX2a(1)      --------------->AGL15                          <----------DOF2      <------NtERF2                        ----------->GT1     <------NtERF2----------------->AGL1 --->DOF2     ----------->GT1<------------CBF ------>NtERF2        <------ZmHOX2a(1)   gatgatgaagaagagaaggtttaatctggtttattgaggaaatagcggcggcaacgatttccagatggaggaaagtatctgagaagaagaaatggtctat  3608100       <-----------GT1      <-----------GT1              <----------DOF2   cacagattaatacccgtttggttttacgtataactctattcccccaaattttcggattactttgggctacaggcccatactatttgggccttattctcat  3608200                                                                                              ------>NtERF2                                                                                         <------NtERF2                                                                                        <-----------HVH21                                                                                        ------>NtERF2                                                                                       <---------O2                                                                                       --------->O2 <                                                                       <---------------AtSPL3 <------                                                                      <----------DOF2------>NtERF2 --                   <-----------GT1                       ------>ZmHOX2a(2)     <-----------ARR10   --   aaaaattagaactatgcgttttaacccaaacaagtcataatcagcgcgggagaccatgatcgtcgttacaagctttgtacggaactccgccgtcgctgcg  3608300        ------>NtERF2 ------NtERF2       <-------TEIL ---ABI4(1)         ------->TEIL                                             <-----------HVH21 ------->ABI4(2)<---------------AtSPL3                                <----------DOF2 ---->NtERF2--------->AtLEC2                               ------->TEIL <-----------GT1   gtggcttcgacgccatggaacgtacgtttgagagagctcgcatatcagtcattgttttctgaatctatatctctttaccggtcaatgctccgttctggtt  3608400                                                                                               ------                                                                                       ----------->HVH21                                                                                     --------->O2                                                                                     <---------O2  <-                                                                                     <---------TGA1a                                                                                     --------->TGA1a                                                                                     ================                                                                                     ================                                                                                     ================                                                                     ----------->RAV1(1)     --------                <----------DOF2                                   ------>NtERF2      ================        ------>NtERF2                                      <-----------HVH21<-------TEIL    ---------     ------>NtERF2                              <----------DOF2  ------>NtERF2     <------------OsbHLH66    ----------->HVH21 <----------DOF2           ===============================================bZIP_DOF   cttctcccgacgcgttctctttccctttcattctcaagtcttgtgcttccctttcgctccctgtctccggccaacagctacattgccacgtgaccaaagg  3608500 ------>AtMYB77 ------GAMYB =======MYC_MYB ======MYC_MYB ==bZIP_DOF                                                                 ========================= -->DOF2                                                                ------->TEIL ==bZIP_DOF                                   ----------->GT1         <-------TEIL                 <- ->DOF2                             ------>ZmHOX2a(2)        <-------GAMYB  ---------->DOF2     -----   cggttgcgagactgagccgtttgtactaacggctctgatctcaatgtattgtaaatgcggtttggttgcagatgcacgtaaagtgttcgaagaaaatcct  3608600   =====================================bZIP_DOF   --------->TGA1a ============bZIP_DOF ----------HVH21             <----------DOF2 ->ZmHOX2a(1)        <-----------GT1       <-------TEIL     <-----------HVH21   cagtcaagtcagcttagtgtttgttacaatgctttgatatctgggtacacagcaaactcgaaggtcactgatgctgcgtatatgtttcgtagaatgaagg  3608700                   ----------->GT1               >>>>>>>>>GATA-1               >>>>>>>>>GATA-4                            ------>ZmHOX2a(1)               >>>>>>>>>GATA-3                    ------->TEIL                            <--------ZAP1               >>>>>>>>>GATA-2        ----------------------->TaNAC69(2)                  <----------   aaactggtgtgtctgtggattcagttacaatgcttgggcttgtcccgctatgcacggttcctgaatacctctggcttgggaggtctcttcacggtcaatg  3608800  Previous    Next  AGI:  At3g11460.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G30700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15895.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 3608256    to: 3610127    Orientation: Forward Links:  TAIR  MIPS