Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
      -------->P
 <---------ALFIN1
----------GT1                <-------TEIL
--------HVH21  <-----------GT1                    <------NtERF2           ----------->GT1
 
gtcaccacttaccacttattacctaaattaaattcattataatgcatattggtggcagaaaaattgtatatgtaatgctgaaaaacaaaatggtatatgt  10188900
                                                                                <-----------GT1
                                <------NtERF2                    <-----------TGA1               <---
 
aatatcattcgatagaaacaattcgaacaattggccgcattagaactacaatgacataaaaatgtcttcgtcattttaatttttttcttatcatttttga  10189000
  ----------->GT1
--------RAV1(1)      <----------DOF2   ----------->GT1                    ----------->GT1
 
tgttgtggtgaaattttagtgtaacttttaaaatttatcgattggtgaaatcaaaaatatttgatcaattggttagacgctaaatatttgatcaattggt  10189100
                                                                                          ----------
                                                                                         -----------
    ----------->RAV1(1)                       <-----------GT1                          ---------->DOF2
 
tagaccacaacaaaaatatttaattaattggttagacgattgtaagatattacatcagattaatagcgtctagagaatacacttcgacgaaaaaggaaaa  10189200
                                                                      <------------CBF           ---
->GT1                                                       <----------DOF2                    <----
>GT1                                  ------------>CBF --------->ALFIN1                 <-----------
 
tcacttaaaaaaaaaaaaaaaaatacacttcgacgaaacatgtcaatagtcatatgagttgggccttatagtttattgggcctgagtagattattgggct  10189300
------->DOF2
------DOF2
-CBF ----------->GT1          *TSS                  <----------DOF2                ---------->DOF2
 
taaaggagtagtaaaaaacaagaagacgctaacactagacttccaaaaatcaaaactttagggtttcagagcaaactctgtcttcttcaagccgagagcg  10189400
                                                       ------>ZmHOX2a(2)
                                                      <------ZmHOX2a(2)
                                                     <-----------ARR10
                                         <-----------HVH21                       <-----------GT1
                                    <-----------HVH21<---------AGP1       ---------->ID1<----------DOF2
 
aaaaccctaagctcaattccgattttgcaactatgagtcgttcaggtcagcctccggatcttaagaagtaagcccttgttcttatttctctctttctgtt  10189500
                                     <-----------RAV1(1)
                               <----------DOF2                       <-------TEIL      ---------->DOF2
 
tctatatcttcgtgtttctgatttaatttttgtgcttaatctgttgtttgtttttgtttcgttcgatgcaggtacatggataagaagctccaaagtaagt  10189600
             <----------DOF2                                               <----------DOF2
 
tcaatatcttcatcttcttttatcgatagttagggaacttcagttttgtataacacattagctgagatgtgattgcaactttattctgtgaatcgaactg  10189700
         <---------------AGL15
         --------------->AGL15                                                                <-----
      <-----------GT1                    ---------->DOF2                        ---------->DOF2
 
gatttggtattactgattttagttatagtgtctagaatcgaactcaaagtagtttttttttggtgattgtgttttgattttagcaaagagtggatttttt  10189800
<- Previous    Next ->

AGI:  At2g23930.1   
Description:  SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G). Identical to Probable small nuclear ribonucleoprotein G [Arabidopsis Thaliana] (GB:O82221); similar to small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative [Arabidopsis thaliana] (TAIR:AT3G11500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15893.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920)
Range:  from: 10189331    to: 10190320    Orientation: Forward
Links:  TAIR  MIPS