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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
1 10 20 30 40 50 60 70 80 90 100
-------->
P
<---------
ALFIN1
----------
GT1
<-------
TEIL
--------
HVH21
<-----------
GT1
<------
NtERF2
----------->
GT1
gtcaccacttaccacttattacctaaattaaattcattataatgcatattggtggcagaaaaattgtatatgtaatgctgaaaaacaaaatggtatatgt
10188900
<-----------
GT1
<------
NtERF2
<-----------
TGA1
<---
aatatcattcgatagaaacaattcgaacaattggccgcattagaactacaatgacataaaaatgtcttcgtcattttaatttttttcttatcatttttga
10189000
----------->
GT1
--------
RAV1(1)
<----------
DOF2
----------->
GT1
----------->
GT1
tgttgtggtgaaattttagtgtaacttttaaaatttatcgattggtgaaatcaaaaatatttgatcaattggttagacgctaaatatttgatcaattggt
10189100
----------
-----------
----------->
RAV1(1)
<-----------
GT1
---------->
DOF2
tagaccacaacaaaaatatttaattaattggttagacgattgtaagatattacatcagattaatagcgtctagagaatacacttcgacgaaaaaggaaaa
10189200
<------------
CBF
---
->
GT1
<----------
DOF2
<----
>
GT1
------------>
CBF
--------->
ALFIN1
<-----------
tcacttaaaaaaaaaaaaaaaaatacacttcgacgaaacatgtcaatagtcatatgagttgggccttatagtttattgggcctgagtagattattgggct
10189300
------->
DOF2
------
DOF2
-
CBF
----------->
GT1
*
TSS
<----------
DOF2
---------->
DOF2
taaaggagtagtaaaaaacaagaagacgct
aacactagacttccaaaaatcaaaactttagggtttcagagcaaactctgtcttcttcaagccgagagcg
10189400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<-----------
ARR10
<-----------
HVH21
<-----------
GT1
<-----------
HVH21
<---------
AGP1
---------->
ID1
<----------
DOF2
aaaaccctaagctcaattccgattttgcaact
atgagtcgttcaggtcagcctccggatcttaagaa
gtaagcccttgttcttatttctctctttctgtt
10189500
<-----------
RAV1(1)
<----------
DOF2
<-------
TEIL
---------->
DOF2
tctatatcttcgtgtttctgatttaatttttgtgcttaatctgttgtttgtttttgtttcgttcgatgcag
gtacatggataagaagctccaaa
gtaagt
10189600
<----------
DOF2
<----------
DOF2
tcaatatcttcatcttcttttatcgatagttagggaacttcagttttgtataacacattagctgagatgtgattgcaactttattctgtgaatcgaactg
10189700
<---------------
AGL15
--------------->
AGL15
<-----
<-----------
GT1
---------->
DOF2
---------->
DOF2
gatttggtattactgattttagttatagtgtctagaatcgaactcaaagtagtttttttttggtgattgtgttttgattttagcaaagagtggatttttt
10189800
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AGI:
At2g23930.1
Description:
SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G). Identical to Probable small nuclear ribonucleoprotein G [Arabidopsis Thaliana] (GB:O82221); similar to small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative [Arabidopsis thaliana] (TAIR:AT3G11500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15893.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920)
Range:
from: 10189331
to: 10190320
Orientation: Forward
Links:
TAIR
MIPS