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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                                   ------------>MYB.PH3(1)
       -------->HAHB4              ------------>AtMYB77                                  -----------
-RAV1(2)                     ---------->DOF2                                           ---------->DOF2
 
taagttttaattatagttagaacttctgttagtaaagataacagttactaactcggaaatccaattttatcaaaaaaattaaatagcatctaaagttaaa  5913200
                                  ----------->GT1                                                 --
>GT1                 ---------->DOF2                    <--------HAHB4                   <-------TEIL
 
cgaggtatttttcaaatttaaaactaaagatattaaacggctaaataaaaattaggtaatcattttttgagattttttctaaaaaaaaaatatacatatt  5913300
                                    ---------->DOF2
                                 ----------->GT1
                                 ------>ZmHOX2a(2)   <----------DOF2
---->ZmHOX2a(1)                 <------ZmHOX2a(2) <-----------GT1 ------->GAMYB
 
cctataaatatgattcgtaacagtagattgcacagatcgtaaagaacttgatttatctttttaaaataacggtagttttgtttagccaaattttaagaaa  5913400
                   <-----------GT1
                   ---------->ID1
                  <-----------GT1
           <----------DOF2                    ----------->HVH21
       ---------->ID1           ----------->GT1
      <-----------GT1 <----------DOF2 <----------DOF2         ----------->GT1                -------
 
acttgattttttctctttttttttccttttttaaattgtgactttacacatgacacaaatacaactgataaaataatttatgatttataagataaatgat  5913500
                                                                                   ------------>CBF
    =====================HOX2a_HOX2a                                             ----------------->AGL1
    <------ZmHOX2a(1)                                                            <---------------AGL15
---------->DOF2   <------ZmHOX2a(2)                                              --------------->AGL15
->HAHB4         <------ZmHOX2a(1)                                      ----------->GT1  ----------->GT1
 
tgataaaggataagattaaggatcaaggatgtattgttttgaacaacctaaaaaatacaaaatcagcgtatttatcgttaatttcccacaatagaaaaaa  5913600
                                                     ------->GAMYB
                                                     ----------->HVH21
                                                   -------->P         ------>ZmHOX2a(2)
                               *TSS      ------->GAMYB----------->RAV1(1)
                              ---------->DOF2    <---------ALFIN1   <---------AGP1   ----------->HVH21
 
aaaatatttaggtttgttttagcaaaattttgagaaagagacaactgaagcaccaaccgacacaagttttggatctcaaattgtgtctgcgaccgcgttg  5913700
                 <--------P
      <----------DOF2      <----------DOF2
   <---------ALFIN1     ------>ZmHOX2a(1)                    <----------DOF2           ------->TEIL
 
tttccaacactttgagcaaggtaagtcctactttccggttttgatttgatttgattttagatgtctttggtttagttgtattgacaaatgtatcgatttc  5913800
                                                ------>ZmHOX2a(2)
                                              <---------AGP1                               ------>ZmHOX2a(2)
                   <--------P                 ------->TEIL             ---------->DOF2    <------ZmHOX2a(2)
 
gtttatgctaatttgtgttatggttggattgtttggcatcaaatttatggatctattgtactggatttggagaataaagatagaatctttgagatctctt  5913900
                                       ---------->DOF2             <------ZmHOX2a(1)        --------
 
gccaatttatggctatacgcttaagaaaaatcgaaactttgaaaaagtttggtagagtggaatggttttaggaacttgggagatgtttatgttttgtctt  5914000
---------->DOF2                                  ---------->DOF2                          <---------
-->ID1----------->HVH21                  ---------->ID1 -------->P           ---------->DOF2      <-
 
aatcaaagcttgacactggttatgtgtgatgaagtttatgttttgtcttaatcaaagcttacccttgtaattttgttagttaaagagagagagcttttat  5914100
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AGI:  At2g14045.1   
Description:  similar to putative c-myc binding protein [Brassica rapa] (GB:ABL97988.1); contains domain PTHR13168 (PTHR13168)
Range:  from: 5913632    to: 5915456    Orientation: Forward
Links:  TAIR  MIPS