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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
    ------->GAMYB
   <---------ALFIN1                                                                              ---
----------GT1                                                                                    ===
---->GT1             ----------->GT1        <-----------GT1       <-----------GT1          <--------
 
taaacaacaccctgtaaggctaagaggtaatttgcaaattgtcatttttactagcatctgtattatgttttacttgtttacaaaacacaaaaattaactt  29869500
                                                                                         <----------DOF2
                                                                               -------->HAHB4  -----
                                                                           =========================
                                                                           --------------->AGL15
-------------->AGL3                     ----------->GT1                <-----------GT1 <------------
===========================================================================================MADS_MADS
---GT1    ---------->DOF2       ------->TEIL                <-----------GT1<---------------AGL15
 
cccatatatatacaaaagataagaaatatgttatggacttatggtgttaaatctgttgattattgaccatataataacctaattatagtaaactttttgg  29869600
                                                                               <------------CBF
                                                                              -------->HAHB4
------>GT1                                                              <-------TEIL
=====MADS_MADS                                              <------------CBF  <--------ATHB1
-----AG                                              <------NtERF2 <------ZmHOX2a(1)
 
gtaaaatttctgattacagtcaacttaatccgttttccaagggttgaaatagaggcgtagagtaattgaaggacgttcaaataattgtaaacacatctat  29869700
                                                                           ---------->DOF2
      ------->GAMYB                                               <---------------AGL15            >
    -------->P                                                    --------------->AGL15           <-
 
caactccaaccaaatgtaaactaatttttttttttttaatttctaaattacttgtgaaaattataaattcttgttttagaaagcattttcagtttttttt  29869800
                                                                                        ---------->DOF2
     ----------->GT1                                                                  ------>ZmHOX2a(2)
>>>>>>>>MYB98                     <-----------HVH21                                  <------ZmHOX2a(2)
----------GT1            <-----------ARR10                                          ------->TEIL   <
 
ttaacataaggtttaattttcataagcgtatcatcaccatcacgcttgaagaatgctcatgatcatcgaatcaagaagaagaagatggatccaaagttgt  29869900
      -------->P                                                                               -----
----------DOF2         ----------->GT1 <-----------GT1                                   <----------
 
tgctttgcttacctcaaggagatgaactgtttaatccccttaataccatgtttattcaaatggcttgcattctcgtcttctctcaattgttttatctcct  29870000
          ------>NtERF2
         ------>NtERF2         ----------->ARR10    <----------DOF2
->ZmHOX2a(1)        --------->PCF5          <------ZmHOX2a(1)
-GT1----------->RAV1(2) <-------GAMYB      ----------->GT1                    <----------DOF2
 
tcttaaaccctgcggccaagctggtcccgttgcccagattcttgtaaggaaatttctttcttgcgttacaagaatcacccggttttttgtagtggaaaat  29870100
                                                                                            <------ZmHOX2a(1)
                    <-----------------AGL1                   ------>ZmHOX2a(1)     ---------->DOF2
 
gtctaacaagtttttgttttgttatccatattggatattttttaggctgggattgtgttgagtcctgttttgctctcaagaatacctaaagttaaggaat  29870200
                                                                                        ------>ZmHOX2a(2)
                               ------>ZmHOX2a(1)                                      <---------AGP1
               ----------->RAV1(1)           <----------DOF2                       --------->ALFIN1
  ------>ZmHOX2a(1)      <-----------GT1------>ZmHOX2a(1)<----------DOF2------>ZmHOX2a(2)
 
tcttcctccagaaaaatgcagcagattattactccttcttctccttcgctttacggacatctttcatgttcttgatcggtcttgaagtggatctacattt  29870300
                                                             ------>ZmHOX2a(1)           <<<<<<<<<NAM
                       ----------->GT1                 ------>NtERF2       =========================
               ---------->DOF2                        ------>NtERF2        ------>ZmHOX2a(1)<-------
 
catgagaagaaatttcaagaaagctgcggtgataaccttgagctcattcgtggtttccggcctcctcagtttcgcttccttaatgttattcatccctttg  29870400
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AGI:  At1g79400.1   
Description:  ATCHX2 (CATION/H+ EXCHANGER 2); monovalent cation:proton antiporter. similar to ATCHX1 (CATION/H+ EXCHANGER 1), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT1G16380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67417.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153)
Range:  from: 29869885    to: 29872733    Orientation: Forward
Links:  TAIR  MIPS