Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ALFIN1                <--                      ----------->RAV1(1)                  ------>NtERF2        --------------->AtSPL8   cagaacaatggattggtgtattagcaacaagaaaatgcaaatgctcaattcaacatatcgaggcctaaacacctctaacctctaggtacccaatcccata  29868800       ---------->DOF2                                             <---------ALFIN1  <----------DOF2                  ---------->DOF2        ---------->DOF2                      <----- ----ZmHOX2a(1)  ---------->DOF2--------->AtLEC2   ------>ZmHOX2a(1)    ---------->DOF2   <------ZmHOX2a(1)   ggagctttgcaaagtagcagaaagaatcatcatcaagcaaagttctactcatcctccaagaaaagttccacacatcaagcaagacaactataggaactat  29868900               ------->GAMYB                                                                      ---            <-----------GT1                                                                       <-- ----------AtSPL3          <---------ALFIN1         >>>>>>>>>MYB2      <-----------ARR10       <-----   gtacgaacaaattgtaaccatcaagttcaacaccgattagcatcaatagaagaaaaccaactacatacgagagtatctgggcgagcagatttacggaggc  29869000                                                                          ---------->DOF2                                                                     ----------->RAV1(1)                                                                     --------------->AGL15                           ----------->HVH21                   ----------->HVH21                  ===================================================================MADS_MADS                  <---------------AGL15                     <------ZmHOX2a(1) --->NtERF2      <-----------------AGL2                  <-----------RAV1(2)                        < ----NtERF2      <-----------------AGL1                  ========================RAV------->TEIL   <- -NtERF2 <-----------RAV1(2)                        ---------->DOF2 ----------------->AGL3        <--   gggcttcgagctcagggttactggaattggtgacctgcataactccatagccaataacgccaggaatgacaccacataaagcagcgaacgtgaagaagaa  29869100                                                                                                    <                                                                                            <--------      ------->TEIL                                                                          --------- ------>ZmHOX2a(2)                                                                          <-------- ------ZmHOX2a(2)                                                                           --------- --------AGP1                                                                               ========= ----ZmHOX2a(1)                                                                             ---------   ggatctcgaatctcgcgtcttcatcactagccatctccatgtattgctcttctcatacatgaacgacatctctctctctctctccgttcttctcacctgg  29869200 ----------DOF2 -O2 -->RAV1(2) -TGA1a >O2          *TSS                      ----------->GT1     ------>ZmHOX2a(1) ==========bZIP_DOF                <----------DOF2---------->DOF2              <----------DOF2 >TGA1a  <-------TEIL        <-------TEIL    <------------CBF               <-----------GT1   ggtttttagggttcatgatttgacttacaggttcgcactttagcgttaattgcaaagaactcctatttgattatttatttactttttggaccccatatta  29869300                                                                                                   <-                                                                                              -------                   ------>ZmHOX2a(1)                                     --------->AtLEC2 <----------DOF2   ttctcatgtttcgtttgtatcctgaacagtatgtgtattatagttcagcccctatagtttgttttttattatgccatgaacactctagttttcttttggt  29869400     ------->GAMYB    <---------ALFIN1                                                                              --- ----------GT1                                                                                    === ---->GT1             ----------->GT1        <-----------GT1       <-----------GT1          <--------   taaacaacaccctgtaaggctaagaggtaatttgcaaattgtcatttttactagcatctgtattatgttttacttgtttacaaaacacaaaaattaactt  29869500                                                                                          <----------DOF2                                                                                -------->HAHB4  -----                                                                            =========================                                                                            --------------->AGL15 -------------->AGL3                     ----------->GT1                <-----------GT1 <------------ ===========================================================================================MADS_MADS ---GT1    ---------->DOF2       ------->TEIL                <-----------GT1<---------------AGL15   cccatatatatacaaaagataagaaatatgttatggacttatggtgttaaatctgttgattattgaccatataataacctaattatagtaaactttttgg  29869600                                                                                <------------CBF                                                                               -------->HAHB4 ------>GT1                                                              <-------TEIL =====MADS_MADS                                              <------------CBF  <--------ATHB1 -----AG                                              <------NtERF2 <------ZmHOX2a(1)   gtaaaatttctgattacagtcaacttaatccgttttccaagggttgaaatagaggcgtagagtaattgaaggacgttcaaataattgtaaacacatctat  29869700  Previous    Next  AGI:  At1g79390.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95389.1) Range:  from: 29868118    to: 29869214    Orientation: Reverse Links:  TAIR  MIPS