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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
    <---------ALFIN1                                                                               <
    <-----------GT1                                                           ----------->GT1   <---
---------DOF2                                                         <-------TEIL             <----
 
tctttttccacccttcgatatatcttcatcggacgattcaaattctcaaatatatactcatgctctcgttggatacattaattgttataagttgggtttt  25500600
----------DOF2
--------GT1                                                                                <--------
-------GT1                                                    ------>ZmHOX2a(1)     ----------->GT1
 
aacttttaaaatgaacagtttttcatatttgggtgtgtatttttcagatatataaattccaactcctgttataaatttatgtaaacatcgttattaacac  25500700
                                 ---------->DOF2
---GT1                     <----------ID1      <-----------GT1      <---------ALFIN1    ----------->GT1
 
taagagacgcacaagctctgtctgagaaaaaaaacaaaaagctaaactattttcattataattccaatctcacacgcaaaaaccttagaaacagaaaata  25500800
                   ----------->GT1     <-----------GT1
               --------->ALFIN1 ---------->DOF2     <----------DOF2
           ---------->DOF2  ---------->DOF2<----------DOF2          ---------->DOF2      -----------
 
tatctgtctgaagaaaaagtgccggtaataagaaagaaagaatcacctttctctactttgtttttaatttcaaaagcattttctcatgaagacagtcaaa  25500900
                                                    *TSS
                                <----------DOF2   <----------DOF2                              <----
   <----------DOF2          <---------ALFIN1  ------>ZmHOX2a(1)                      <----------DOF2
>GT1     ---------->ID1<-----------GT1    <-----------GT1  ----------->GT1  ------->TEIL <----------DOF2
 
aaatctctttttgtcttctcaaatttaaacctcacctttaatatttctccttacttttgaagctgtaataatattcttgaatctattcctttctttctct  25501000
                                                                                 --------------->AGL15
                                                                                 <---------------AGL15
                                                                                ----------------->AGL1
                                                                             <----------DOF2
                    <----------DOF2                            <----------DOF2  ----------------->AGL3
------DOF2   ----------->HVH21   <----------DOF2    ---------->DOF2  <----------DOF2
 
ttctcatgtttaatcggtgaaggctttactctgtttctttcatcatgtttcaatcaaaagccttaactttttctttagctctttccattacaagagacct  25501100
                                                                            <-----------RAV1(1)
                                                                ------>ZmHOX2a(2)             <-----
                                                                ====================================
        <----------DOF2                                        <------ZmHOX2a(2)           <--------
  <-------TEIL             <----------DOF2           ----------->GT1        ========================
 
ctagcttcatactttttataaaaattctctctttttctcagtttaatctcaagaaatggtttcaagatcgtattcaaatctgttggagttagcttcagga  25501200
-ZmHOX2a(1)
=HOX2a_HOX2a                                                                                   =====
---RAV1(2)             <----------ID1          <-------GAMYB <-----------HVH21                 -----
===RAV               ------->TEIL            ----------------->AGL1                ---------->DOF2
 
gactcaccaacgtttggacgcatgaaccgacaaatcccacgaatcatggccgttgctggaatcatgtcaaacatcgataatgactctaaagacactgatc  25501300
          ------>ZmHOX2a(2)
         <------ZmHOX2a(2)
    ---------->DOF2
   =============HOX2a_HOX2a
   ==============HOX2a_HOX2a
   ------>ZmHOX2a(1)                                                                            ====
==========HOX2a_HOX2a                                                                           <---
->ZmHOX2a(2)                                               <--------P                           ----
 
tgtctcctaaagatcgtatcatcattgtagccaatgaattacctatacgagctcagagaagggttgatggtaatggtagtggtagtagtagtagtagtac  25501400
           <--------P
===================================MADS_MADS                       <------ZmHOX2a(1)
------------AGL15 <----------DOF2    <-----------GT1           <<<<<<<<<MYB98                    <--
----------->AGL15<-----------------AGL3               ---------->DOF2     ------->TEIL      <-------
 
ttgttgtagcaaaggttggaacttttcttgggatgagaattcacttcttctccaattgaaagatgggttaggagatgaagctattgaagttatctatgtt  25501500
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AGI:  At1g68020.1   
Description:  ATTPS6 (Arabidopsis thaliana trehalose phosphatase/synthase 6); transferase, transferring glycosyl groups / trehalose-phosphatase. similar to ATTPS7 (Arabidopsis thaliana trehalose-phosphatase/synthase 7), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] (TAIR:AT1G06410.1); similar to ATTPS9 (Arabidopsis thaliana trehalose-phosphatase/synthase 9), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] (TAIR:AT1G23870.1); similar to ATTPS5 (Arabidopsis thaliana trehalose phosphatase/synthase 5), transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidops
Range:  from: 25500953    to: 25504037    Orientation: Forward
Links:  TAIR  MIPS