Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                -----                                      ------->TEIL                                              <----                ---------->DOF2    --------->AtLEC2 <-------TEIL                                -----   ttctaggtttaattgatgaaaagagataacgtaagtcatgcacatgtaattaaattcatgcccctaactattaattcttgcaagtaattaaaaaataaaa  24888200 -------TEIL                      <-----------GT1 ---------->AtSPL3           <----------DOF2              ------>ZmHOX2a(2) -----------AtSPL8           ====================================HOX2a_HOX2a                      --- ---------->AtSPL8           ------>ZmHOX2a(1) <-----------GT1                                <------   cgtacacaaaatatatttatgatcactaatcctttttaactactaacattaacgatttgatctatcaatgtctaatgatttcagggaaattttttgtttc  24888300          -------->ABF1         --------->O2         --------->TGA1a         <---------O2                                                                         <------ --->ZmHOX2a(1)       ------>ZmHOX2a(1)                                                 --------->ALFIN1 -----GT1<---------TGA1a                     ----------->GT1  ---------->DOF2         <-----------RAV1(1)   ctcatgtttacacgtgtcaacatcctccgaaggaatgcaaatggttgtggaaaaaaaaaaaaaaaaaagaatgcaaatggttgagctcgtgttgggcttt  24888400                                                                                      ----------->GT1                                                                                   ------------>MYB.PH3(1)                                                                           ----------->GT1 ----DOF2              <----------DOF2                                   ---------->DOF2       ------   gttttcttattttgttttttaagggctttagtggcccatgtaagttatgtttcatcaataaaactccacttataagaaagaaaaaaaatggttacaaccg  24888500                              <-----------RAV1(1)                     ----------->GT1                    ----------->STF1 ->GAMYB          ----------->TGA1      ------------>CBF               *TSS   aagtccaaaaaaccaaaatagtgacgtaaaaactgttgcttaaacaatctgaagtctggacgcttgatttgattccttccgttttctccaaaaccagacg  24888600                             <------NtERF2                            ------>NtERF2                                ----------->RAV1(1)                           <----------ID1                              ------>NtERF2                          ---------->ID1                              --------->PCF2                 <-----------------AGL3                              <------NtERF2              <-----------HVH21              ------>ZmHOX2a(1)   ------>NtERF2     ------>NtERF2   aaggcaatccctaaaccgtcacatttttggcgccaaatttcatcttcctcatcatggcctctgattccgccggagccacaatctccggcaacttctcaaa  24888700                                                                                <---------ALFIN1                                                                               ----------->HVH21 ------>NtERF2                                            ------>ZmHOX2a(1)   <---------ALFIN1   ctccgacaactcagaaaccctaaatctcaacactacgaaactctactcatcagcaatttcctctatctctccacaattcccctcaccgaaaccaacatct  24888800                                                                     <---------ALFIN1                                                                   <---------ALFIN1              ====                                                                   ----------->RAV1(1)           ----                                                                ------>NtERF2            <----------DOF2                                                             ------>NtERF2          <-----------HVH21                                                      ------>ZmHOX2a(2)          ------>ZmHOX2a(1)     ------>ZmHOX2a(1)     ------->TEIL               ==================================HOX2a_HOX2a   tcatgtccttcaatccctaattcaaaacgaatccctaatactaacttcatcgtcgatctcttccgcctcccacaccaatcatcctccgtcgctttcttcc  24888900                <------ZmHOX2a(2)        ------>ZmHOX2a(1)                ==========================HOX2a_HOX2a        <---------ALFIN1               ----------->RAV1(2) ======================HOX2a_HOX2a ------>ZmHOX2a(1) -->ZmHOX2a(1)  ================================HOX2a_HOX2a                                        --   tctcacatttccactccgatcactactccggtctctcctcttcctggtccaaaggaataatctactgctcacacaaaaccgctcgtctcgttgcagaaat  24889000                                                                                                  <--                                      ------->TEIL   <------ZmHOX2a(2)                         <----- ---->ZmHOX2a(1)           <----------DOF2   ----------->GT1                            -------->ATHB1   ccttcaagttccttcacaattcgttttcgctttacctatgaaccaaatggttaagatcgatggctctgaagttgtgttgattgaagctaatcattgtcca  24889100  Previous    Next  AGI:  At1g66725.1    Description:  MIR163; miRNA Range:  from: 24887594    to: 24888222    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g66730.1    Description:  ATP dependent DNA ligase family protein. similar to ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1), ATP binding / DNA ligase (ATP) [Arabidopsis thaliana] (TAIR:AT1G08130.1); similar to hypothetical protein OsJ_002946 [Oryza sativa (japonica cultivar-group)] (GB:EAZ13121.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68778.1); contains InterPro domain ATP dependent DNA ligase, C-terminal; (InterPro:IPR012309); contains InterPro domain DNA ligase, N-terminal; (InterPro:IPR012308); contains InterPro domain ATP-dependent DNA ligase; (InterPro:IPR000977); contains InterPro domain DNA repair metallo-beta-lactamase (InterPro:IPR011084); Range:  from: 24888571    to: 24895486    Orientation: Forward Links:  TAIR  MIPS