Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                                                ----------->RAV1(1)           ---------                <----------DOF2               <----------DOF2<----------ID1               --------->ALFIN1   aaataatagtagaaccctcttttatttatacttatacttgatcatatactttacataatataaacaacaaataggtaatcaattttgttcgtgtgtggtg  24887200             <-----------GT1        <----------DOF2        ----------->HVH21        <------ZmHOX2a(1)    ---------->DOF2             <---------ALFIN1         <--------ATHB1   <-------GAMYB    <------ZmHOX2a(2)                 --------->PCF2      -------->P            <<<<< >ALFIN1===================HOX2a_HOX2a       ---------->DOF2      ------->GAMYB   -------->ATHB1<<<<<   tagacagttaggatttaacaagatcaaataaaaaagaccttttcaaatcaagccgagacccacgacaacgacacactaccccaataattgtttacacaat  24887300                                                                                             <-------                                                                                     <-----------TGA1                                                                                     <-----------HVH21                                                                                    --------->O2                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                  <---------ALFIN1                                                                             --------------->AtSPL8                                                                             --------------->AtSPL3                                                                       ----------------------->TaNAC69(2) <<<<ARR2  ------->GAMYB                      ================================================bZIP_DOF <<<<ARR1 ----------->HVH21                   <----------DOF2       ----------->GT1<-----------STF1   cataaatacccaacgaccggccaatgcgtatccactagtgaattgatacttttaaggttaagagaaaatgaggtttattttcgtacacgtcatttggtgt  24887400        <---------ALFIN1 --------AtSPL8                              <-----------GT1           ------->GAMYB <---------AtLEC2   actgtctcgaccacattcacatgttttctgaggtcgagaaactattttaactaacacggcacttaaaattcaactgcaagattttttgaatggaagactt  24887500                                            ----------->GT1                ---------->DOF2     ----------->GT1                           <-----------GT1      <-----------GT1            ---------->DOF2----------->TBP   <------NtERF2               *TSS   attagttattaccaaatcaaaagtcttctgatcatcaaaggaaaattagtataaataagcatagaggcgtccatggattatcacagttctcatcaaatat  24887600                           ----------->GT1                ---------->DOF2    ---------->DOF2      <------ZmHOX2a(2)                       <----   ttgaaagtatcaaacaaaaaaaggagagtgagaaaaataaagagagagatagagagagatcatgtccactactcaagagcataggtcttgattggtggaa  24887700    ------->TEIL                ----------->GT1   -------->P                            <------ZmHOX2a(1) ------ARF1                     <xxxxxxxxxxxxxxxxsmallRNA(s) ------->GAMYB <---------ALFIN1        --   gacaagtaccttagataaaccgaccaaaacccggtggataaaatcgagttccaacctcttcaacgacaacgatttcaacactctcttccaggaacaactt  24887800   --------->AtLEC2                                                                    <------------- <-----------RAV1(2)--------->ALFIN1                                                  ------->TEIL ---->ZmHOX2a(1)---------->DOF2        ------>ZmHOX2a(1)   ---------->DOF2       <-------GAMYB   cctccaggcagatgatactaaagtgctggagttcccggttcctgagagtgagtccatatcaaaatgcgcattcgttatcacttggttgaacccatttggg  24887900                                           --------->O2             ----------->HVH21             <---------O2            ----------------------->TaNAC69(2)                         <-----------HVH21 ----AGL1  ----------->GT1               ------>ZmHOX2a(1)   <------ZmHOX2a(1)   gatttaaatttggaggtgaaatggaacgcgtaattgatgactcctacgtggaacctcttcttaggaagagcacggtcgaagaagtaactgcgcagtgctt  24888000                                              xxxxxxxxxxxxxxxx>smallRNA(s)                                              xxxxxxxxxxxxxxxx>smallRNA(i)                            <xxxxxxxxxxxxxxxxsmallRNA(i)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxsmallRNA(i)                          <------ZmHOX2a(1)  <-----------GT1                         <xxxxxxxxxxxxxxxxsmallRNA(i)                        xxxxxxxxxxxxxxxx>smallRNA(i)                       xxxxxxxxxxxxxxxx>smallRNA(i)                      xxxxxxxxxxxxxxxx>smallRNA(i)                      xxxxxxxxxxxxxxxx>smallRNA(s)           ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(s)   aaatcgtagatgctaaagtcgttgaagaggacttggaacttcgatattatcccccgtgttttgtccagtttctctataggttgtgcctgaaaatatgggt  24888100  Previous    Next  AGI:  At1g66725.1    Description:  MIR163; miRNA Range:  from: 24887594    to: 24888222    Orientation: Forward Links:  TAIR  MIPS