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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved binding sites (0-100)
 
1        10        20        30        40        50        60        70        80        90        100 
                                                                                    <---------------AGL15
                                                                         <-----------GT1
     ------>NtERF2       ---------->DOF2 <----------DOF2       ----------->GT1      --------------->AGL15
 
agagttgcctccatggtgagacaaatataaaagatatttcgaagctttatgaaattaagtatatatttgttaaaatttactaacttccaattttgagaaa  24884400
                                                                     <----------DOF2           <----
                                                                  ---------->ID1               <----
                                                                 <-----------GT1               -----
                   <----------DOF2   <----------DOF2            <-----------GT1               <-----
         <-------TEIL     <-----------GT1                <-------TEIL------>ZmHOX2a(1)      <-------
 
tgttagattacatacatctgtgcttttttttatctttcatctttaaaacaaaattgaacattcatttttatccttttcatcagaaaaacaagaaataact  24884500
        ----------->GT1
    ---------->DOF2
-----------AGL15
------DOF2
---------->AGL15               ---------->DOF2
------------AGL3         ----------->GT1             >>>>>>>>>WRKY18
----GT1 <----------ID1  ----------->GT1             ----------->HVH21
 
tttttaagaaagagaaaaacatgaagagtgtttaaaaagactcgttttcaatcttttgacagatttgttttgtttttcaaataatattaaaacataaaac  24884600
                                                                                                  --
                 ---------->DOF2                                                                  <-
     <----------ID1                  <-------TEIL                                        -----------
     ----------->GT1      ----------->RAV1(1)                                          <----------DOF2
 
tatagaagacgaaaaacaagaaaagagtccaccatagacatccatgatattcaaacatcaaactatattctcccttgtgtgcaccatcgactttgtaaat  24884700
---->ZmHOX2a(1)                                        ----------->GT1
---------DOF2           <-----------GT1            <-------TEIL
>GT1                   <-----------GT1         <---------------AtSPL8                    -----------
 
cctttaatcgtttcatatcttacattttaacttcttggcaaaactagtttaaggtacagtgtaattaagagaagagatttcaaatgaaaaattagtataa  24884800
                                           ---------->DOF2            ----------->GT1
                   <------ZmHOX2a(2)  ---------->DOF2           ---------->DOF2---------->DOF2    <-
>GT1       <------NtERF2------------>CBF  *TSS             ---------->DOF2 ---------->DOF2      <---
 
acaagcatagaggcgtccatagatcatcacaattctcataacaaagtaaagtatcaaacaagaaaagaaaagtgagaaaaaagaaagcgagcgaaataat  24884900
      ----------------->AGL1
   -------->P               <------ZmHOX2a(1)                             <-----------GT1
----------GT1         <--------P      ------>ZmHOX2a(1)             ----------->GT1
--------HVH21  <-----------HVH21----------->ARR10                 <-----------RAV1(2)
 
gtcacctactccagaatgggtcatggttggaggagaaggtcctgagagttacaagcagcattcttcgtatcaggtttatacataacaattgatttttaaa  24885000
                                                                                     ----------->GT1
                                                                                     <------ZmHOX2a(1)
                              <-----------GT1                                       ----------->GT1
                           ------->TEIL                                  ---------->DOF2      ------
                   ------>ZmHOX2a(1)      <----------DOF2      ----------->ARR10 ---------->DOF2   -
 
ttcttagctagaatatgaattcctaagatgtatttacaggcttctctttgattggggttttatagagagatttgctgaaagcagcaaaggataaaataaa  24885100
                                                                                   <----------DOF2
             ------->TEIL                      <-----------RAV1(1)           ----------->HVH21
---->DOF2  ------->GAMYB                       --------->ALFIN1        --------->ALFIN1 ---------->ID1
---------->GT1                             <-------TEIL      <-------GAMYB------->TEIL<-----------RAV1(1)
 
cgcggtgatttcaacgaacctcagcctcaatttgatttcgaatcggttcagtgttgcggatttcggttgtgcaagtggacctaacacttttgtcgcagtc  24885200
                                                                              ------>ZmHOX2a(1)
                                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)
               --------->ALFIN1                                        <-----------RAV1(2)
 
caaaacataatagatgccgtggaagagaagtatcttagagaaaccggacaaaacccggacgataacatcgagttccaggtcctcttcaacgacttaagca  24885300
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AGI:  At1g66720.1   
Description:  S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to PXMT1, S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT1G66700.1); similar to AtPP protein [Brassica napus var. napus] (GB:CAB89183.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299)
Range:  from: 24884843    to: 24886143    Orientation: Forward
Links:  TAIR  MIPS