Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                                     ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------AGP1                                 ------->TEIL                               ------>ZmHOX2a(2)                         <------ZmHOX2a(1)   ----------->HVH21             <------ZmHOX2a(2)                         ================HOX2a_HOX2a<-----------HVH21     --------->AGP1   ---------->DOF2       =================HOX2a_HOX2a            ------->TEIL   gccataaaagaaggcttctcaacatcaggaacacggatctggagatactgaccgggtctcgtgtacgaagctacgagatccggagcgtttgaaatgtcga  5211900                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                   <------NtERF2                                                                                   <---------ABI4(1)                                                                                  ------>NtERF2                                                                                <---------ABI4(1)                                                                        <------------------SPL14 ----                                                                       ------>ZmHOX2a(1) <------NtERF2         ---------->DOF2                     <------ZmHOX2a(1)     <-----------HVH21--------->ALFIN1   ttgagatgtggaaaagcgattctgcagctgattcgattagagagagaggagctggagtccagagggaagcgtcctggcgaacggcggcggcggatacaac  5212000         <-------GAMYB        ----------->GT1                                  <------ZmHOX2a(1)      ------>NtERF2                                   <-----------RAV1(2)     <---------O2                                --------->ALFIN1--------->ALFIN1   ---------->DOF2  ----------->HVH21                 --------->ALFIN1  <------NtERF2            --------->ALFIN1 --->GAMYB                       <-----------------------TaNAC69(2)          --------->ALFIN1     ---   ggaagcgacgcggttatttcgggataaacggagatggcgtgtaagagggagatggcgcaggataaacatgggggagagggagtggctaaagtgcgcatgg  5212100            ---------->DOF2                                                        ---------->DOF2          <------NtERF2                                                       <------NtERF2         ------>NtERF2                                                     <------NtERF2   ------>NtERF2    ---------->DOF2                                     ----------->HVH21 ------>NtERF2   ------>NtERF2 -------->HVH21                           <-----------RAV1(1)<-----------HVH21<-------GAMYB<------NtERF2   gtgacagaaggcgcgaaaggaagagtggacatggtggagagtttttggggctctatatgtgaccgtcaaatttagccggcggtagaaaagggcggcccga  5212200                                                                        --------->ALFIN1                                                                      <---------O2                                                                      <<<<<<<<<<HY5                                                                      ===============================                                                                      <---------TGA1a                                                     <-------GAMYB    --------->O2        <------NtERF2                        <-----------GT1          --------->TGA1a               <       ------>NtERF2                  ------->TEIL   ===========================MYC_MYB          <---   ttggttcggtggcacgattgtgttatttttttttgctatgcacctaatttccttccgttacaatgttttgccacgtggatgatcaaaatatcattctatc  5212300        <---------ALFIN1 ==========bZIP_DOF                                                              <----------ID1 ----------DOF2                                                        ---------->DOF2             -- --------GT1                                *TSS                   <----------DOF2         ----------   tactttccgaccacttgttgtgatacttcgaaaattgcattccctcttcatttaattttgctagctcgtctttcaaagaaaaaacaccaaatcatgtaat  5212400                       <----------ID1                     ----------->GT1                      <-------TEIL -------->DOF2     ---------->DOF2                    <---------------AtSPL8       <-------GAMYB ->GT1  <------------CBF     ------------>CBF         --------------->AtSPL8    -------->P      <----   taaaagacagaattgtggaagaaaagtgacaagcaatatgcatattaaaaaacgtaagagtacattatcaatgaacactccctaccgttgagccaaattt  5212500                                     --------->ALFIN1                                   <---------O2                                   --------->TGA1a  ------->TEIL                     --------->O2                                            ---------- -------GT1                        <---------TGA1a                 <------ZmHOX2a(1)  ----------->RAV1(1)   aacgtatatatttcattcatggttttggaattttgccaagtggcactacactatagattcccttggtaaggaattacacataaccaagcaccaaaaagca  5212600                             <----------DOF2                                 <------NtERF2         <- >DOF2    *TSS            <---------ALFIN1<----------DOF2         --------->AtLEC2             ------   gacagtagtacttcacgattatcactcaccactttccgtttcaactttcaaactctctctcacaagccatgcaagacgcggagagaaccaccaatgatcc  5212700                                              <-----------HVH21                                             <----------DOF2                                          ------->TEIL                               ------>ZmHOX2a(2)                           ----------->ARR10------>ZmHOX2a(2)                 ----------->HVH21<---------AtLEC2                                     ------>ZmHOX2a(1) -------P      ----------->GT1<------ZmHOX2a(2)                                     ------>NtERF2 >ZmHOX2a(2) ---------->DOF2 --------->AGP1<------ZmHOX2a(2)                <----------DOF2   ------>NtERF2   ggtagacagaattgagaaagtgacatggagagatctgcaagacggatctttcaccgcagaactcaagaggcttatctgctttgcggctcctatggctgcc  5212800  Previous    Next  AGI:  At1g15140.1    Description:  oxidoreductase NAD-binding domain-containing protein. similar to ATLFNR2 (LEAF FNR 2), poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.3); similar to ATLFNR2 (LEAF FNR 2), NADPH dehydrogenase/ oxidoreductase/ poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.1); similar to ATLFNR2 (LEAF FNR 2), poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G20020.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42229.1); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Pheno Range:  from: 5210201    to: 5212344    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15150.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15180.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15160.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G15170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42224.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 5212610    to: 5214853    Orientation: Forward Links:  TAIR  MIPS