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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
-----------------------
--------->
HSFC1(2)
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
HSFB2a(1)
<---------
MYB46(3)
<----
<---------
TOE2(3)
<------
MYB46(1)
<----
<---------
DOF5.7(2)
<------
MYB83
<----
--------->
AHL20(1)
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
<-------
TEIL
-----
--------->
ARR11(3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AtMYB61
<----
<---------------
AGL15
<---------
AHL20(1)
<---------
YAB1
<---------
HSFB2a(2)
<----
--------
AHL20(2)
<---------
ICU4
--------->
CCA1(2)
--------->
HSFB2a(2)
------
------->
AHL20(2)
--------->
YAB1
--------->
ARR11(3)
<---------
ANAC46
<------
----->
AHL20(2)
<---------
YAB1
<---------
ARR11(3)
<---------
LBD16
<<<<<<<<
tttatatatattgtaaacgttttgatgatcacattatttttaaaatttctgaagatataattgaacttatcatttcgggaggttcgattttatatgttac
22688300
>
TaNAC69(2)
-----
ANAC58
-----
ANAC46
-----
ANAC55(2)
---->
ANAC55(2)
<----------
DOF2
-----
ANAC58
<---------
YAB1
--------
-----
ANAC55(1)
<---------
ARR11(3)
<-------
--->
MYB52(2)
----------->
GT1
<---------
ANAC55(2)
--------->
YAB1
--------->
TOE2(3)
-----
GT1
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
YAB1
<-----------
GT1
--
<
MYB98
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
YAB1
----------->
GT1
ttgtcaaaaatttaaaatttgacaatagaaaaaaatggctatatcacatattatctttgattttgtatgattattttgcatttaacatcgtaaaaaatgt
22688400
<---------
CCA1(1)
<---------
RVE1(1)
<---------
ARR11(3)
<
--------->
ARR11(3)
-
<---------
GLK1(2)
<
------->
AtSPL8
<------
ZmHOX2a(2)
----------->
GT1
--------
AtSPL8
<---------
GLK1(2)
--------->
ARR11(3)
<---------
AHL20(2)
-
------->
ICU4
--------->
TOE2(3)
<---------
ARR11(3)
----------->
GT1
<---------
LBD16
actaatttgaagattttttgaaaacttaaattctccaatagcacaatagatcatatattctatgggtgaatgtgaaattcaaatttatgtccggttcaat
22688500
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC46
--------->
ARR11(3)
<---------
ANAC55(2)
<---------
GLK1(2)
--------->
ANAC55(2)
<---------
ARR11(3)
<-----------
GT1
----------->
ARR10
---------
At4g35610
----------->
GT1
<---------
At4g35610
-
-------->
At4g35610
--------->
LBD16
--------->
At4g35610
<
---------
ZAT2
<---------
LBD16
<---------
ARR14(2)
------>
NtERF2
<---------
ARR14(2)
------
-------->
ZAT2
--------->
MYB52(1)
--------->
ARR14(2)
--------->
DEAR3(1)
<-----------
GT1
---
tcagctcgagttttacttaaccggaacgaaaatcaaatcgaaccgtattttgaagaataaaacgacgacgatttgagcagatttttcaggatttaatttg
22688600
<---------
AHL20(2)
<---------
CCA1(1)
<---------
RVE1(1)
---------->
DOF2
--------->
ARR11(3)
<---------
TOE1(3)
<---------
ICU4
<---------
ARR11(3)
<-----------
RAV1(2)
-------->
HAHB4
<-------
GAMYB
--------->
GLK1(2)
-------->
ICU4
--------->
MYB52(2)
<---------
ARR11(3)
---------
ATHB51
<---------
ANAC46
--------->
ARR11(3)
----->
GT1
<-----------
RAV1(1)
--------->
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
------>
YAB1
<------------
CBF
<---------
MYB46(3)
<---------
GLK1(2)
*
TSS
------>
ZmHOX2a(1)
taataatgcaaaaagattgagtttttgttgtttgttgagatatttaaaaagattcttcaggttttaatttgttttcc
aactctctcctctgctttacaac
22688700
------>
NtERF2
<---------
RAP2.6(3)
--------->
RAP2.3(3)
=====================
MYC_MYB
-------->
P
======================
MYC_MYB
--------->
ARR14(2)
------->
GAMYB
<---------
ARR14(2)
<---------
MYB111(2)
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC46
<---------
MYB55(2)
--------->
ARR14(2)
--------->
REM1(1)
<---------
ARR14(2)
<---------
ZAT2
--------->
DEAR3(1)
<---------
ANAC58
--------->
ZAT2
--------->
DEAR3(2)
--------->
At5g28300
--------->
GLK1(1)
--------->
At4g35610
----------->
GT1
--------->
ANAC58
<---------
At4g35610
--------->
TGA1a
--------->
ANAC46
<---------
ANAC46
------>
ZmHOX2a(1)
--------->
ARR14(2)
--------->
GLK1(2)
<---------
ANAC58
aaatcgtctccgtcttcctcgctcagcttcaacaaccagagccgacttgagattgagaatcaacgtaatcg
gtaaattttcgtatacgcaaatccattct
22688800
======================
HOX2a_HOX2a
=============================
HOX2a_HOX2a
------->
TEIL
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
AGP1
--------->
GLK1(2)
--------->
ARR14(2)
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
TOE2(2)
=======================
HOX2a_HOX2a
<---------
YAB1
--------->
TOE1(2)
<------
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ANAC55(2)
<-------
GAMYB
--------->
ANAC58
<---------
ARR14(2)
--------->
ZAT18
<---------
CCA1(2)
<-----------
GT1
--------->
ARR14(2)
--------->
ZAT14
--------->
GLK1(2)
<---------
ARR14(2)
<---------
ICU4
--------->
ARR11(3)
<---------
ZAT18
<---------
GLK1(2)
------->
TEIL
--------->
ANAC46
<---------
LBD16
<---------
ZAT14
<---------
ARR11(3)
--------->
ARR14(2)
<---------
MYB52(1)
<---------
ARR11(3)
actcattttgagttcacttacatatcaagattcttctatctctgttgaatctgcgattcacgaatccattaggacgatttttggggatctagatcgggtt
22688900
<---------
YAB1
--------->
MYB52(2)
--------------->
AGL15
<---------------
AGL15
<---------------
AGL15
<---------
ANAC58
<-----------------
AGL2
<---------
ANAC58
--------------->
AGL15
--------->
ATHB12
<-----------------
AG
<
<---------
AHL20(2)
----------------->
AG
<-----
<---------
WOX13(1)
----------------->
AGL1
-------
--------->
GLK1(2)
<---------
YAB1
<-----------------
AG
<------
--------->
ARR14(2)
--------->
TOE2(3)
<-----------------
AGL2
<---------
AHL20(2)
<---------
GLK1(2)
<-------
TEIL
<-----------------
AGL1
--------->
AHL20(2)
<---------
ARR14(2)
--------->
ICU4
<---------
TOE2(3)
----------------->
AG
<---------
WOX13(1)
ttgtttctcagaacctgtaattgattgtgtaatccttgagttcattaatgtataaattcaaatttcccaatttgggtttgtttctgatggattttattaa
22689000
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
<---------
YAB1
<---------
ANAC58
<---------
TOE1(3)
--------->
AHL20(2)
---------
ANAC46
<---------
TOE2(3)
<----------
DOF2
<---------
MYB52(1)
----
AHL20(2)
<---------
ANAC46
<------
MYB46(1)
----------->
ARR10
-->
AHL20(2)
--------->
ICU4
<------
MYB83
<---------
YAB1
<---------
GLK1(2)
<---------
CCA1(2)
---
AHL20(2)
<---------
YAB1
--------->
MYB59
<----------
DOF2
<---------
AHL20(2)
--
ttttgtgtgtccataaattgtgatgtttaagattaaaatttggttaatgagctttgattaagtctttagattctccattaattttcttatcttcttcaat
22689100
<---------
ZAT14
--------->
YAB1
--------->
ICU4
<---------
YAB1
--------->
YAB1
--------->
MYB52(1)
<---------
ICU4
<---------
ANAC46
----------->
GT1
<---------
bZIP60(1)
<-----------
RAV1(1)
<---------
AHL20(2)
--------->
At4g35610
--------->
YAB1
--------->
ICU4
<-------
--------->
AHL20(1)
<---------
At4g35610
--------->
ICU4
--------->
ANAC46
<---------
ANAC46
<---------
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
--------->
ANAC58
<---------
ANAC58
--------->
GT1
<---------
MYB59
--------->
YAB1
<---------
ICU4
--------->
ANAC58
<---------
ANAC58
attgtatatattatgtggacataactgaatcatctgaatagtaaaatcatgataatgacttcagtttctaagcaatgtttgtgttgcctatattgactga
22689200
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AGI:
At5g55990.1
Description:
CBL2 (calcineurin B-like protein 2); calcium ion binding. Identical to Calcineurin B-like protein 2 (CBL2) [Arabidopsis Thaliana] (GB:Q8LAS7;GB:O81446); similar to ATCBL3 (CALCINEURIN B-LIKE 3) [Arabidopsis thaliana] (TAIR:AT4G26570.1); similar to CBL2 [Gossypium hirsutum] (GB:ABW06389.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 22688678
to: 22691081
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.