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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
--------->
ZAT6
<---------
AHL20(1)
<-----------
GT1
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(1)
<
----------->
TGA1
--------->
AHL20(1)
-
<---------
AtLEC2
--------->
YAB1
--------->
YAB1
<-----------
GT1
------
-----
GT1
----------->
HVH21
--------->
TOE2(3)
--------->
TOE2(3)
--------->
AtMYB61
cacttgtgcaaggagcaaatgacgatttataataaattacaaacaaacttatcttaataaatttatcactaccttgaaggggcattgagaccatagcatg
22005300
<---------
YAB1
--------->
MYB46(3)
<-----------
GT1
---------->
DOF2
<-----------
HVH21
---------
<------
ZmHOX2a(1)
---------->
DOF2
--------->
ANAC58
--------->
AtMYB61
-
---------
ANAC55(2)
<---------
YAB1
--------->
ANAC58
<---------
ICU4
---------
-------->
ANAC55(2)
--------->
ICU4
----------->
GT1
<---------
LBD16
----------->
RAV1(1)
<--
----->
GT1
--------->
TOE2(3)
---------->
DOF2
<-----------
HVH21
<---------
ALFIN1
---------
ttacatgaggaaaagaaaacctttgtactgattaaaagaacacttaaagagttaatccattgtcacggctattgtcaccaccattaccattgccacgcat
22005400
<------------
ATHB5
>
ANAC58
--------->
YAB1
----->
ZmHOX2a(2)
<---------
ICU4
--------->
CCA1(2)
>
ANAC58
<---------
ATHB12
---------->
DOF2
-------
ARR11(3)
<-----------
RAV1(1)
--------->
ICU4
--------->
DAG2
>
ANAC46
>>>>>>>>>>>>>>>>>
LFY
--------->
ARR14(2)
---------->
DOF2
gatcgtctccatgactccattgttgccattaccacatcgtttccacaatcatggcaaatgcaatatagtggcaaaggtgaaagagatagacagatagtaa
22005500
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
<------
MYB46(1)
<---------
AHL20(2)
<---------
ANAC58
<------
MYB83
----------->
GT1
<------
NtERF2
<-----------
GT1
--------->
MYB59
<---------
REM1(1)
-
<---------
RAP2.6(2)
<---------
YAB1
<---------
At4g35610
------
<---------
DEAR3(1)
<---------
ZAT6
<---------
YAB1
--------->
At4g35610
<------
--------->
ALFIN1
--------->
YAB1
--------->
ATHB12
<--------
P
--------->
At5g28300
tgttccgatactaggggtggcttaaataatttttctatcgtaatgttaagatgataggtactattgcatttttggtagatgaagggtaaattatataaga
22005600
--------------->
AGL15
<---------------
AGL15
<-----------------
AGL1
<---
----------------->
AGL2
<---
------------>
CBF
-----
--------->
ARR14(2)
<------
<---------
ARR14(2)
--------->
ANAC58
<--------
<---------
TOE2(3)
<-----------
GT1
<---------
YAB1
--------->
DOF2
<----------
DOF2
--------->
ANAC58
--------->
ARR11(3)
----->
GT1
<------
ZmHOX2a(1)
----------------->
AGL1
--------->
YAB1
<---------
ARR11(3)
---
TOE2(3)
<---------
GLK1(2)
----------------->
AGL1
------------>
CBF
*
TSS
--------->
ICU4
ttaaaagtttgaggattcttttgcaattttcccatattagaaacgaaacatgttctcttctcaggcccaataacattttttg
ttaaatctttgattatta
22005700
--------->
YAB1
--------->
AHL20(2)
<---------
CCA1(2)
<-----------------
AGL1
<---------
MYB52(1)
--------->
O2
<-----------
GT1
----------->
GT1
<---------
CCA1(2)
------
TOE1(3)
<-------
GAMYB
------>
ZmHOX2a(2)
------
TOE2(3)
----------->
GT1
<---------
ARR11(3)
----->
DOF2
--------->
ANAC46
--------->
ANAC58
--------->
TGA1a
---
YAB1
--------->
ANAC58
--------->
CCA1(2)
--------->
ARR11(3)
-
ICU4
--------->
ANAC58
--------->
TOE2(3)
--------->
ANAC58
<---------
CCA1(2)
aagttaacccatcttggaatcaaacacgaccgttaaaatcagaaaccttggttttggatatagccagcc
atggtgatcttatctctcgtctcttgttcct
22005800
<---------
MYB52(1)
--------->
At5g28300
--------->
DOF5.7(2)
--------->
LBD16
<---------
DEAR3(2)
----------->
GT1
<---------
ATERF1(2)
<------
NtERF2
--------->
ANAC46
<---------
ANAC58
--------->
MYB46(3)
<---------
ANAC58
------>
NtERF2
--------->
LBD16
--------->
ATERF1(2)
--------->
HSFC1(2)
--------->
ABI4(1)
<---------
LBD16
--------->
HSFB2a(1)
--------->
DEAR3(1)
<---------
At4g35610
<---------
HSFB2a(1)
--------->
MYB46(3)
--------->
At4g35610
<---------
HSFC1(2)
--------->
DEAR3(2)
--------->
REM1(1)
<---------
ZAT2
------>
MYB46(1)
<
<---------
At5g28300
<----------
DOF2
--------->
ZAT2
------>
MYB83
<
<---------
MYB52(1)
<---------
LBD16
--------->
LBD16
<---------
At4g35610
-
--------------------->
WRI1
------>
NtERF2
------>
NtERF2
--------->
At4g35610
-
tctccgttttctcaccgccgattagtctccggcttcatctcccgccggtaacttctctctgctcccatggaaccttccctgcttcttctacatttcggtc
22005900
<---------
ANAC58
<---------
ANAC58
--------->
At4g35610
--------->
ATHB12
<---------
At4g35610
<---------
ICU4
<---------
ZAT2
--------->
MYB46(3)
--------->
ZAT2
<---------
MYB52(1)
--------->
MYB46(3)
<---------
ATHB12
<----------
DOF2
--------->
TOE2(3)
--------->
LBD16
--------->
REM1(1)
--------->
At4g35610
<-----------
GT1
------>
NtERF2
--------->
HSFB2a(2)
---------
ZAT2
--------->
ZAT2
<---------
HSFB2a(2)
<---------
At4g35610
<---------
HSFB2a(2)
---------
At4g35610
<---------
At4g35610
<----------
DOF2
--------->
At4g35610
<---------
LBD16
-------->
ZAT2
--------->
At4g35610
--------->
GLK1(2)
------->
TEIL
--------->
ARR14(2)
-------->
At4g35610
<---------
ZAT2
--------->
HSFB2a(2)
<---------
REM1(1)
<---------
ARR14(2)
tcagctacaaccattgcttatcagctgcttaaatcatcgagaacctgctttaactttccgatgtagctgccttagctctccgattgaatccggaagtcaa
22006000
<---------
At4g35610
--------->
ARR14(2)
<---------
ARR14(2)
------->
TEIL
--------->
GLK1(2)
<------
MYB46(1)
<------
MYB83
--------->
At4g35610
--------->
AtLEC2
----------->
GT1
---------->
DOF2
<---------
MYB46(3)
--------->
DOF5.7(2)
-
--------->
MYB111(2)
<-------
GAMYB
<-
--------->
MYB55(2)
<---------
ANAC46
<-
--------->
MYB111(1)
<---------
ANAC58
----
--------->
MYB46(2)
--------->
ARR14(2)
<----------
DOF2
<------
<--------
P
<---------
ARR14(2)
<-------
TEIL
<---------
ARR14(2)
--------->
ZAT18
<------
<---------
MYB55(1)
----------->
HVH21
--------->
ATHB12
--------->
YAB1
<---------
ANAC58
<------
attg
gtaggtgaatctgactatctgacatttctctgcattcatttgttctctgaagcatatttgcaaacacttggtgtgcgttaatgcaaacacttgtgt
22006100
--------->
AtLEC2
---------->
DOF2
--------->
GLK1(2)
-------->
DOF5.7(2)
<---------
GLK1(2)
<---------
ANAC46
------
GAMYB
<----------
DOF2
----------->
GT1
---------
DOF2
<---------
ANAC58
--------->
CCA1(2)
----->
ZAT18
<---------
ANAC58
--------->
ARR11(3)
<---------
At4g35610
---
ANAC46
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ARR11(3)
>>>>>>>>>
TBF1
---
ANAC58
<---------
ARR11(3)
--------->
ARR14(2)
--------->
LBD16
--------->
HSFB2a(2)
---
ANAC58
--------->
ZAT6
<----------
DOF2
<---------
MYB52(1)
<---------
HSFB2a(2)
gcgttaatgcaaacactaagtatctctcttttgctttgcag
aatctctgttttcgttattccgagatattgggtttatagaagaagaaactgagatgatt
22006200
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AGI:
At5g54180.1
Description:
PTAC15 (PLASTID TRANSCRIPTIONALLY ACTIVE15). similar to EMB2219 (EMBRYO DEFECTIVE 2219) [Arabidopsis thaliana] (TAIR:AT2G21710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80174.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690)
Range:
from: 22005683
to: 22007454
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.