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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
MYB46(1)
------>
MYB83
<---------
MYB59
<---------
ICU4
--------->
ANAC46
--------->
AHL20(2)
-----
<---------
ANAC58
<---------
YAB1
-----
<---------
ANAC46
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
<---------
ATHB12
--------->
CCA1(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
--------->
AtMYB61
--------->
MYB52(1)
<---------
AHL20(1)
----
ARR14(2)
<---------
HSFB2a(2)
--------->
ANAC58
<-----------
GT1
-----
--->
ARR14(2)
--------->
HSFB2a(2)
--------->
ANAC58
<-----------
GT1
--------->
AHL20(2)
<
ccgatttaggagttgctt
ctacaaaaccaaaccaataacaaatgtcactaagcaaacagatataattacatttgtaacctattaaatttgaagttatcaa
18499500
--------->
MYB52(1)
------>
MYB83
------>
MYB46(1)
<---------
MYB59
------->
GAMYB
--------->
AtMYB61
--------->
MYB46(3)
--------->
YAB1
-------->
P
--------->
LBD16
------>
MYB46(1)
<---------
LBD16
---->
ANAC46
------>
MYB83
--------->
ZAT18
---->
ANAC58
------->
GAMYB
--------->
ZAT14
<---------
MYB52(1)
-
---->
ANAC58
--------->
ATHB12
--------->
MYB46(3)
------->
TEIL
<---------
ARR14(2)
----
-------
TEIL
--------->
GLK1(2)
<-----------
GT1
<---------
ZAT14
----------->
GT1
--------->
TOE2(3)
gctacatagagaagaatcaattgaatcactggcattaacttaaccaaccaaaccgaagtgaaccggaatcataatgtgaaaccggttatctcaattgaag
18499600
---------->
DOF2
<-------
TEIL
--------->
LBD16
--------->
CCA1(2)
<---------
LBD16
<---------
ARR14(2)
----------->
GT1
<---------
TOE2(3)
------->
TEIL
--------->
DAG2
---------->
DOF2
--------->
YAB1
--------->
ARR14(2)
<---------
LBD16
--------->
YAB1
-------->
YAB1
<----------
DOF2
<---------
ARR14(2)
<-----------
GT1
--------->
ICU4
<----
----->
YAB1
---------->
DOF2
----------->
GT1
--------->
At4g35610
<---------
ZAT14
----------->
GT1
-------
aataagaaagagtaaaagagctataatgttgttacacagatacatcaactgtagatttaaccggactgaaccggaattataaagtgaaaccggttatcac
18499700
--------->
ANAC46
<---------------------
WRI1
--------->
DEAR3(1)
<---------
DEAR3(1)
<------
NtERF2
--------->
DEAR3(1)
------>
NtERF2
<---------
ATERF1(1)
<---------
ALFIN1
<-----------
HVH21
<---------
ABI4(2)
------>
NtERF2
--------->
ERF1
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ANAC46
------>
NtERF2
<------
NtERF2
<---------
ATERF1(1)
--------->
ATERF1(1)
<---------
At4g35610
--------->
DEAR3(1)
------>
NtERF2
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
ANAC46
<---------
RAP2.3(1)
--------->
At4g35610
<---------
At4g35610
<---------
ATERF1(1)
------>
ZmHOX2a(2)
<------
NtERF2
--------->
DEAR3(1)
<------
ZmHOX2a(2)
--------->
At4g35610
--------->
ATERF1(1)
<---------
ARR11(3)
<---------
At4g35610
--------->
ZAT2
--------->
ATERF1(1)
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
DEAR3(1)
--------->
DEAR3(1)
<---------
ARR14(2)
<--
---------->
DOF2
<-----------
HVH21
----------->
HVH21
--------->
ICU4
--------->
At4g35610
-----
YAB1
<------
ZmHOX2a(1)
--------->
At4g35610
<---------
DEAR3(1)
--------->
ARR11(3)
<--
-->
YAB1
<------
ZmHOX2a(1)
<---------
ZAT6
<---------
ZAT2
<------
NtERF2
--------->
YAB1
----------->
RAV1(2)
aattgaagaagaggaggaaagaggagcttac
tgtcagcgccaccgagcttagcgacggcgtcgacgaagcgatcatgaagatcggctgtccatctgagcc
18499800
--------->
YAB1
<
<---------
ICU4
<--
<---------
YAB1
--------->
TOE2(3)
<--
------>
ZmHOX2a(2)
--------->
YAB1
<----------
DOF2
<--
--------->
GLK1(1)
<---------
TOE2(3)
<-----------
GT1
<---
<---------
GLK1(1)
--------->
LBD16
--------->
ARR14(2)
--------->
YAB1
<------
ZmHOX2a(2)
------>
NtERF2
<---------
MYB59
<-------
TEIL
<---------
AHL20(2)
--------
--------->
ARR11(3)
--------->
ANAC46
--------->
TOE2(2)
--------->
AHL20(2)
<-------
<---------
ARR11(3)
<---------
LBD16
--------->
TOE1(3)
<---------
DAG2
<------
ZmHOX2a(2)
--
-------
TOE1(2)
--------->
ICU4
<---------
YAB1
--------->
LBD16
--------->
AHL20(2)
<--------
-------
TOE2(2)
--------->
YAB1
--------->
ICU4
--------->
TOE1(2)
*
TSS
<-----------
GT1
<--------
taggtttgggatctctagtcatcat
aactccgccattatcgtaacctaaacctccgagattcactctttc
catttaattttccgatcaaacaaaataatg
18499900
------
NtERF2
-------
ANAC58
<---------
ARR14(2)
-------
ANAC46
--------->
ARR14(2)
-------
ANAC58
----------->
GT1
------
LBD16
<------
ZmHOX2a(1)
->
MYB52(1)
---------->
DOF2
--
ICU4
=========================
HOX2a_HOX2a
<--------
------->
LBD16
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
---------->
DOF2
-
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
================
HOX2a_HOX2a
----------
-
ATHB51
------->
TEIL
<-----------
GT1
----------->
HVH21
<---------
ANAC46
---------
gcgggaaactcagtcggaagaatgaatcaaataacttcgaaattttcctcttctcaaggatgtgatcggaaagaggaagcgtaaactcaaaaaaaggaaa
18500000
=====
<----
<----
-----
-----
<-----
---------->
DOF2
------>
NtERF2
---------->
DOF2
======================
--------->
WOX13(1)
--------->
ETT(1)
<---------
ANAC58
<-------
--
ID1
--------->
ANAC58
--------->
ALFIN1
<---------
ANAC58
--------->
ARR11(3)
->
GT1
--------->
ANAC58
--------->
DAG2
<---------
TOE2(3)
<---------
TOE2(3)
--------
-->
GT1
--------->
ANAC46
---------->
DOF2
---------->
DOF2
--------->
ATHB12
--------
aatggcaatcgaactacgaaatattggtcggaaagaaagtggaagaaattttgttaaagatgggaatgcgagtgattagggtaaagagataatcggcgac
18500100
----------->
GT1
<------
ZmHOX2a(1)
==========================
bZIP_DOF
<---------
ARR11(3)
-----
O2
--------->
ARR11(3)
-----
TGA1a
--------->
GLK1(2)
---->
TGA1a
--------------->
AGL15
---->
O2
<----------
DOF2
-
NtERF2
--------->
ATHB12
<---------
DAG2
=====
bZIP_DOF
--------->
ATHB12
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
--
DEAR3(1)
--------->
ICU4
<---------
GLK1(1)
<---------
TOE2(3)
--->
HVH21
<---------
YAB1
---------->
DOF2
<---------------
AGL15
--
->
DEAR3(1)
---------->
DOF2
<---------
WOX13(1)
========================
HOX2a_HOX2a
---------->
DOF2
-
gagaggacgagataaatagaaagaagtgtgatgattgatggagaaaaagagatcagaaaactttttgaggaaaatctcagagagagagaaagggaactta
18500200
<-----
<---------
YAB1
---------
--------->
ICU4
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
--------->
YAB1
<---------
AHL20(1)
--------->
At5g28300
<---------
MYB52(1)
---------
<---------
ANAC46
<---------
ANAC58
<-------
GAMYB
--------->
YAB1
<---------
DEAR3(1)
<---------
ANAC58
----------->
GT1
<---------
YAB1
<------
NtERF2
--------->
ICU4
<---------
WRKY12
<--------
HAHB4
--------->
ATERF1(1)
----------->
HVH21
--------->
TOE1(3)
--------->
YAB1
<------
NtERF2
--------->
YAB1
----------->
GT1
<-----------
TGA1
<---------
YAB1
<-----------
HVH21
--------->
ALFIN1
--------->
MYB52(1)
<---------
YAB1
<---------
YAB1
-------->
DOF2
<---------
YAB1
<------
ZmHOX2a(1)
<---------
YAB1
--------->
DOF5.7(2)
<---------
ZAT6
-------->
DAG2
--------->
ICU4
<------
ZmHOX2a(1)
<---------
YAB1
--------->
TOE2(3)
----------->
GT1
aaaaagtcgtcgcggtgatgatgatgatggaggaggagaagtggtgacattattcgtgacttaacgtcaaccttcggttaatatagtattattataatat
18500300
--------->
ZAT6
---------->
DOF2
----------->
RAV1(1)
--------->
YAB1
-
------>
ZmHOX2a(2)
--------->
YAB1
<
<------
ZmHOX2a(2)
<---------
YAB1
<
------->
TEIL
--------->
YAB1
<--
--------->
ARR14(2)
<---------
YAB1
------
<---------
ARR14(2)
--------->
YAB1
------
----
AHL20(1)
<---------
TOE2(3)
--------->
AHL20(1)
--------->
AHL20(2)
>
AHL20(2)
<---------
ATHB51
---------->
DOF2
----------->
GT1
--------->
AHL20(2)
>
YAB1
<-----------------
AGL3
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
----------->
GT1
atgtataatacaaattatggatccaacactaaaagtttgtttatatacaaaaacaaattgtatccatatcgaaatattatgataataaaaaagaaaatag
18500400
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AGI:
At5g45580.1
Description:
transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G24120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50003.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:
from: 18498319
to: 18499870
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.