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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
At4g35610
----------->
RAV1(1)
---------->
DOF2
<---------
ANAC58
<-----------
ARR10
<---------
ANAC58
--------->
GLK1(2)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR14(2)
<---------
CCA1(2)
<---------
CCA1(2)
--------->
DAG2
----------->
GT1
<----------
DOF2
--------->
ARR14(2)
---------->
DOF2
---------->
DOF2
--------->
YAB1
--------->
AHL20(2)
<---------
ARR14(2)
----------->
GT1
--------->
AHL20(2)
<-
agaatcgtgatggtaaacttttaaatctttcttgtccagcagtatcccaaat
ctgtgcgaaagaaaaaaaagtgtttttgaataaaaaagattaacttgt
15882600
----------->
GT1
<---------
ANAC58
<---------
ANAC58
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
bZIP60(2)
---
<---------
AHL20(2)
<---------
ANAC58
<-----------
ARR10
<-----
--------->
AHL20(2)
<---------
ANAC58
--------->
ARR14(2)
-------
--------->
MYB52(1)
<---------
ANAC46
<----------
DOF2
--------->
AHL20(1)
------
--------
ANAC46
<-----------
GT1
---------->
ID1
<---------
ARR14(2)
--------->
ARR11(3)
<-----
ggagtaagggattaatatatttac
ttgtaaaatgacttgtctttctgcgatacaaatctccttggtgactaaatctacatatattgtagaattatgtagc
15882700
--------->
MYB52(1)
--------->
ARR14(2)
<---------
YAB1
<---------
DOF5.7(2)
<---------
ANAC58
--------->
ANAC58
---------->
DOF2
------>
At4g35610
<---------
ARR14(2)
<---------
TOE2(3)
--------->
CCA1(2)
----
At4g35610
------->
TEIL
--------->
ANAC58
--------->
ARR11(3)
<----
>
TEIL
<---------
ANAC58
----------->
RAV1(1)
<---------
ARR11(3)
--------->
ANAC58
--->
At4g35610
<---------
CCA1(2)
<---------
TOE1(3)
----------->
ARR10
----------->
GT1
-----
----
ZAT2
<---------
YAB1
------>
NtERF2
<-----------
GT1
<---------
ARR14(2)
--------->
ANAC58
tgcttaaaatccttgtcattgtat
cttcggccacaagttatggtttttacaacgatgggaagatatagaaagagataacgaaaatatagcaagccgaaga
15882800
------>
MYB46(1)
------>
MYB83
<---------
ARR14(2)
-------->
P
--------->
AHL20(2)
--------->
ARR14(2)
<---------
MYB46(2)
--------->
AHL20(2)
>>>>>>>>>
RAP2.2
<----------
DOF2
<---------
ANAC58
----------
-----
ARR11(3)
<---------
AHL20(2)
<------
ZmHOX2a(1)
<---------
ANAC58
---------->
DOF2
---->
ARR11(3)
--------->
AHL20(1)
---------->
DOF2
--------->
REM1(1)
<---------
MYB59
<---------
ZAT6
-
tttaacagaaaccaaaaaaattgaaatgtgcaatctaaagaggatac
cgcttcaacagtgatgttttgcctacc
ctgcatagagagttagaaagaaagga
15882900
------>
ZmHOX2a(2)
<---------
ARR14(2)
<---------
ARR11(3)
<---------
ARR11(3)
================
HOX2a_HOX2a
--------->
ARR11(3)
--------->
ANAC46
--------->
ARR11(3)
<---------
ARR14(3)
--------->
ANAC58
--------->
YAB1
--------->
ARR14(3)
--------->
ANAC58
<---------
KAN4(2)
--------->
GLK1(2)
--------->
ZAT14
------>
NtERF2
>
DOF2
<---------
HSFB2a(2)
---------->
DOF2
--------->
ARR14(2)
<------
ZmHOX2a(1)
-------->
ZAT6
---------->
DOF2
----------->
GT1
<-----------
GT1
--------->
DEAR3(1)
<-------
aaacactagtttttaagagaaagtctcgaaaatcttgaaaaatagacaaagttttaactagtatac
ccgctatcgccgaggagaatgatcttaagctttg
15883000
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
ZAT18
--------->
ANAC58
--------->
KAN4(2)
<---
<---------
HSFB2a(2)
--------->
KAN4(1)
----
--------->
HSFB2a(2)
<---------
KAN4(1)
----
<-----------
GT1
---------->
DOF2
<------------
CBF
--------->
CCA1(2)
---------->
DOF2
---
DOF2
--------->
ANAC58
<---------
ZAT14
<---------
GLK1(2)
<-----------
GT1
--------->
GLK1(1)
ttttttccat
aagcacacgaaagaagtctacagagattgttccctgattctatttctgaaattttcaagttatgggtttttggacagaaatcaaagaagt
15883100
<---------
YAB1
<---------
ICU4
--------->
ATHB51
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
----------------------->
TaNAC69(2)
--------->
AHL20(2)
<---------
ZAT14
------------>
CBF
--------->
AHL20(2)
--------->
ZAT14
<------------
CBF
--------->
ICU4
--------->
ZAT18
--------->
ANAC58
<---------
AHL20(2)
------
ZAT14
--------->
ANAC58
--------->
AHL20(2)
----->
ZAT14
--------->
ANAC46
--------->
YAB1
--------->
MYB52(1)
------->
TEIL
----->
ZAT18
<-----------
GT1
--------->
WOX13(1)
<---------
AHL20(2)
------->
TEIL
<------
ctactgtactgtttctaccatctacgacattgtctatcaattttaattatttttaattttgaagagagaacgggctcttatatgaaactatgaaccgtta
15883200
--------->
TOE2(3)
--------->
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(1)
----------->
TBP
--------->
WOX13(1)
<---------
AHL20(1)
<---------
AHL20(2)
------------>
CBF
<---------
ARR11(3)
--------->
AHL20(2)
<--------
<------
NtERF2
--------->
ARR11(3)
--------->
TOE2(3)
--------->
YAB1
--------->
ANAC58
--------->
TOE2(3)
<-----------
ARR10
--------->
ANAC58
--------->
ANAC58
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ANAC58
--------->
ANAC58
--------->
GLK1(2)
<---------
DAG2
<---------
YAB1
<---------
ANAC55(2)
<------------
CBF
<---------
ATHB12
<---------
AHL20(2)
<---------
ARR11(3)
--------->
ANAC55(2)
---
MYB52(1)
--------->
ANAC58
--------->
ARR11(3)
--------->
GLK1(2)
<-----------
GT1
---------
tgccattgccaggccagcaatcaaacccaaaaatctaaatattttttactttttgaaaatcttattatataaatcttaatacgtttcacaagaattatat
15883300
--------->
ANAC55(1)
<---------
ANAC55(2)
--------->
ATHB12
<---------
ANAC55(1)
<-----------
TBP
<---------
ARR14(2)
<---------
ICU4
--------->
AHL20(2)
--------->
DAG2
<---------
AHL20(2)
--------->
AHL20(1)
---------->
DOF2
--------->
YAB1
<---------
AHL20(1)
------>
ZmHOX2a(1)
<---------------
AGL15
--------->
AHL20(2)
--------->
AHL20(2)
--------->
LBD16
--------------->
AGL15
<---------
YAB1
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
ALFIN1
<---------
YAB1
--------->
ARR11(3)
-
AHL20(2)
<---------
At4g35610
<-----------
GT1
<---------
ARR11(3)
------->
TEIL
>
AHL20(2)
--------->
At4g35610
<---------
WOX13(1)
--------->
YAB1
<-------
TEIL
acactaaaatatatatagttcagcacatcctgaaaagtgtgattgaatttactaaattttgacaagtttttatatgatcatataatattgatacgtattt
15883400
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ICU4
<---------
AHL20(2)
<---------
ANAC58
<---------
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
--------->
ANAC55(2)
--------->
ARR11(3)
<------
MYB46(1)
<---------
ANAC58
<---------
AHL20(2)
<---------
AHL20(2)
<------
MYB83
--------->
YAB1
--------->
MYB52(2)
--------->
ATHB12
<---------
YAB1
--------->
AHL20(1)
----------->
GT1
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ANAC58
--------->
YAB1
<---------
MYB52(1)
<---------
YAB1
--------->
AHL20(1)
--------->
ANAC58
--------->
AHL20(2)
------->
TEIL
<-----------
GT1
--------->
TOE2(3)
<-----
cacaagaattttgataggtgtcaaaaaataatagcaatgcgtaatgtatgttagttaaatttacatgattatataacatttattgaaatattttttttta
15883500
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AGI:
At5g39620.1
Description:
AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP binding. similar to AtRABG2/AtRab7A (Arabidopsis Rab GTPase homolog G2), GTP binding [Arabidopsis thaliana] (TAIR:AT2G21880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67538.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma factor 54, interaction; (InterPro:IPR002078)
Range:
from: 15881394
to: 15883010
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.