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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
--------->
YAB1
------
--------->
ATHB12
<---------
ICU4
<------
--------->
ATHB51
-------->
HAHB4
<---------
ARR14(2)
--------->
AHL20(2)
--------->
ICU4
--------->
ARR14(2)
<-----------
GT1
------->
TEIL
<---------
ATHB51
<---------
AHL20(2)
--------->
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
----->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
<---------
YAB1
<-------
TEIL
--------->
AHL20(2)
taaatctaaattttctatttaaaattatttgatgaatttttctatttttaattatgataaatgcaagattcatagtatctaaatttaatacagtatatga
16521500
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
----------->
GT1
<---------
ARR11(3)
<---------
ICU4
--------->
ARR11(3)
--------->
ATHB12
<---------
AHL20(1)
-------->
HAHB4
<-------
TEIL
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
------>
MYB83
<---------
YAB1
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(1)
<---------
ICU4
<----------
DOF2
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
--->
ATHB12
<-----------
GT1
<-----------
GT1
<---------
YAB1
------>
MYB46(1)
<---------
YAB1
--
---
YAB1
--------->
TOE2(3)
<---------
AHL20(2)
--------->
ICU4
<-----------
GT1
--------->
AHL20(2)
----
ttaggcttttcattaaacaatataaatattttttttatcttgacataatgatgagtaaataatttaccaactaaatacatataatttttgatcaatacca
16521600
<-----
<--------
<--------
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
<---------
YAB1
<---------
AHL20(2)
<---------
ANAC58
----------->
GT1
<---------
ANAC58
--------->
AHL20(1)
<---------
ANAC58
---------->
DOF2
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
------->
YAB1
--------->
ANAC55(2)
<---------
TOE2(3)
--------->
ARR11(3)
----->
AtLEC2
<----------
DOF2
<----------
DOF2
<---------
AHL20(2)
--------->
AHL20(1)
<-
ttcaaaagaagaaaaaacactttctcttacttatctttgaattaattttgaaatatttcattaagaaaaattaattgtttaaaatattgctttgattaat
16521700
--------
<---------
HSFC1(2)
--------->
HSFC1(2)
<---------
HSFB2a(1)
<-----------
ARR10
--------->
GLK1(2)
--------->
ARR11(3)
--------->
HSFB2a(2)
--------->
ARR14(2)
--------->
ANAC58
<----------
ID1
--------->
AHL20(2)
<---------
ARR14(2)
--------->
ANAC58
----------->
GT1
<------
ZmHOX2a(1)
<---------
ARR11(3)
----
TOE2(3)
<---------
TOE1(3)
----------->
GT1
---------->
DOF2
-
YAB1
<---------
HSFB2a(2)
----------->
GT1
--------->
DAG2
---------->
DOF2
<-------
-
WOX13(1)
<---------
TOE2(3)
---------->
DOF2
----------->
GT1
<---------
GLK1(2)
--------
ETT(2)
---------->
DOF2
<-----------
GT1
--------->
MYB59
--------->
YAB1
--------->
HSFB2a(1)
gtagacactctagaaaactttttaaaggttagggaaaaaatgttaccaaaaaaaagttaggaaaaaaatgtaaaaataaagaaaagaatcttcttcccct
16521800
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
DAG2
<---------
ARR11(3)
<----------
DOF2
--------->
ARR11(3)
--------->
YAB1
<---------
AHL20(2)
--------->
GLK1(2)
<---------
ANAC58
--------->
ANAC58
<---------
HSFB2a(2)
------->
AGL15
<---------
ANAC58
--------->
ANAC58
--------->
HSFB2a(2)
<-------
--------
AGL15
------->
TEIL
--------->
ANAC46
<---------
YAB1
--------->
AHL20(2)
-
aatagaatccaaacaaatgtatcgcttaccatcaagttgcacaaacactcaaaacgctttttgat
gatttttcttctataaaatctttctcctcaaccat
16521900
--------->
AHL20(2)
<----------
DOF2
--------->
GLK1(1)
<-----------
GT1
<---------
GLK1(1)
--------->
GLK1(1)
<----------
DOF2
<---------
ARR14(2)
<---------
YAB1
<---------
DAG2
--------->
ARR11(3)
<---------
At4g35610
<---------
ALFIN1
<---------
DAG2
--------->
HSFB2a(2)
<<<<<<<<<
TBF1
--
ATHB12
<------------------------
ANAC81
<---------
ARR11(3)
<<<<<<<<<
TBF1
<-------
TEIL
--------->
DOF2
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
<------------------------
ANAC81
ttcaaagccccctcttctctccttctctcccttttctctctctctcgaagatatcgcctttaattccttcttcttcttctgatttcttcaaagattcatt
16522000
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
GLK1(2)
<---------
At4g35610
-------->
P
--------->
At4g35610
<---------
MYB111(1)
<---------
ZAT2
--------->
At4g35610
------>
ZmHOX2a(2)
--------->
STY1(2)
--------->
ARR11(3)
<---------
GLK1(1)
<---------
STY1(2)
--------->
ARR14(2)
<-
<------
ZmHOX2a(2)
<---------
At4g35610
<---------
ARR14(2)
--
--------->
ARR11(3)
--------->
ANAC58
--------->
At4g35610
<--
<---------
ARR11(3)
--------->
ANAC58
----------->
GT1
<---------
At4g35610
---
<---------
GLK1(1)
--------->
ZAT18
---------->
DOF2
--------->
YAB1
<---------
MYB46(3)
tcttagagatctcagcttctgtaagagtaggctagctaccaaaaaaaaagaaatagaaaaaaacattgatgcttaatcagcagttcttggtgtttgagac
16522100
--------->
ARR11(3)
<---------
ATHB51
<---------
ATHB12
<----------
DOF2
--------->
PCF2
---------->
ARF1
<---------
ARR11(3)
<------
ZmHOX2a(1)
------
MYC3
--------->
AGP1
<---------
AHL20(2)
--------->
ATERF1(1)
<-------
----->
MYC3
----------->
ARR10
<<<<<<<<<
MYB98
<------
NtERF2
<-------
GAMYB
-------
O2
--------->
YAB1
------>
ZmHOX2a(2)
<---------
YAB1
<---------
ATHB12
<---------
------>
O2
<--------
ATHB1
<------
ZmHOX2a(2)
<---------
TOE2(3)
<-----------
RAV1(2)
<---------
ATHB12
ac
atgtctccaataatactcagtgagatctttctctctgggtttatgttaaattccacaatcaggcgcaggacccatcttgttcaatctttctctgttgt
16522200
--------->
ATHB51
<---------
ICU4
<--------
HAHB4
--------->
ICU4
--------->
YAB1
--------->
ANAC46
<---------
ANAC58
------>
ZmHOX2a(2)
--------->
ANAC58
<----------
DOF2
<---------
GLK1(1)
--------->
ANAC58
--------->
TOE2(3)
--------->
YAB1
--------->
ARR11(3)
--------->
TOE2(3)
--
MYB52(1)
<----------
DOF2
--------->
ARR11(3)
<-----------
GT1
--------->
YAB1
--
RAV1(1)
<---------
ANAC58
<---------
ARR11(3)
<---------
CCA1(2)
<----------
ID1
<----------
DOF2
cttcctttactggctttactatgtctcatga
tctctgaacttatctccagttttatatctatacgcataattacaacaaaaccctagtttcttttcaaat
16522300
<---
<XXXX
<----
--------->
At4g35610
<---------
ANAC58
<-----
----------->
RAV1(2)
<---------
ANAC46
<--------
<---------
At4g35610
<---------
ANAC46
---------
===============================
RAV
---------
<-----------
HVH21
<---------
MYB52(1)
--------->
AHL20(1)
<-----------
TGA1
<-------
GAMYB
<---------
AHL20(2)
---------->
ID1
------>
ZmHOX2a(1)
--------->
AHL20(2)
<-----------
GT1
------>
ZmHOX2a(1)
<---------
ANAC58
---------->
DOF2
<---------
AHL20(1)
---------->
ID1
<---------
PCF2
<-----------
RAV1(1)
<---------
AHL20(2)
--------->
AHL20(2)
ttctcttcttcgtttttcgtcatctgggtcctgtcctgttctgttgtgtcttgttctgttctgtttttaattcccctaaaaacccattttaaaatatttt
16522400
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AGI:
At4g34588.1
Description:
CPuORF2 (Conserved peptide upstream open reading frame 2). similar to CPuORF5 (Conserved peptide upstream open reading frame 5) [Arabidopsis thaliana] (TAIR:AT1G75388.1)
Range:
from: 16521866
to: 16523235
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At4g34590.1
Description:
GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11); DNA binding / protein heterodimerization/ transcription factor. similar to ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44), DNA binding / protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G75390.1); similar to unknown [Populus trichocarpa] (GB:ABK94250.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)
Range:
from: 16521866
to: 16523235
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.