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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ALFIN1
<---------
ALFIN1
----------->
RAV1(1)
<----------
DOF2
<---------
MYB55(2)
<---------
DAG2
--------->
MYB46(3)
------>
MYB46(1)
------>
MYB83
------>
MYB83
<---------
ALFIN1
--------->
MYB46(3)
--------->
AtMYB61
--------->
MYB52(1)
<------------
CBF
--------->
DEAR3(1)
<---------
MYB46(2)
-------
--------
YAB1
--------->
MYB46(3)
--------->
TOE1(3)
------->
GAMYB
-------
->
ZmHOX2a(1)
--------------------->
WRI1
--------->
TOE2(3)
--------->
AtMYB61
<-
--->
TOE2(3)
------>
ZmHOX2a(2)
------>
MYB46(1)
<----------
DOF2
--------->
AHL20(2)
<---------
DAG2
taatattggtctctgatctgtatttgtgatcaccacccacacattgtgttttcttttttatcaaaccttaaaattcgcctaaccatcccctttttcaagc
13060300
<---------
ZAT14
--------->
ZAT14
--------------->
AGL15
<---------
ZAT14
<---------------
AGL15
--------->
REM1(2)
<---------
DAG2
=========================================================================================
MADS_MADS
<-----------------
AGL3
--------->
ZAT18
--------------->
AGL15
----------------->
AGL2
<---------
ZAT18
<---------
ATHB12
<---------------
AGL15
-->
ANAC58
<---------------
AtSPL8
<----------
DOF2
-->
ANAC58
--------->
WOX13(1)
--------->
ANAC46
<---------
AHL20(2)
<---------
AtLEC2
---------
DOF2
<-----------
GT1
--------------->
AtSPL8
--------->
YAB1
<-----------
GT1
-----
actttcttctctatttttagcaatctatatgtgtgtacacatcatccatccattcattcatacattctattttttttttttacttttttttgcatgaata
13060400
<---------
MYB52(1)
<----------
DOF2
<---------
MYB52(1)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC46
<---------
ANAC58
<---------
bZIP60(2)
----------->
HVH21
--------->
O2
<---------
ZAT18
<---------
O2
--------->
ZAT18
<---------
RAP2.6(2)
--------->
O2
-------------
<---------
ANAC58
<---------
ZAT18
--------->
YAB1
----------->
GT1
------>
NtERF2
<---------
ZAT6
<---------
ANAC58
<---------
ICU4
--------------
------>
GT1
<---------
ANAC58
--------->
MYB52(2)
<---------
ANAC58
<---------
ATHB12
---------->
ID1
ctaaaatatggcaaatcgcttggcgacttggcgttagtgtccacttgacgtttgcttacacattgatcaaatcattttcatattttgtctccattttttg
13060500
<--------
P
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
YAB1
--------->
YAB1
--------->
AHL20(2)
-->
AGL15
<---------
YAB1
----------->
GT1
<---------
AHL20(2)
<
--->
AGL3
<----------
ID1
--------->
LBD16
<---------
AHL20(1)
<--
aatgcataaatgaaaatgagccaaaacgatgatactccgaaaatgaaaaatatatatttttttggggtagttttgaaaatttggcatttttctaagttaa
13060600
--------->
HSFB2a(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
DOF5.7(2)
<---------
HSFC1(2)
--------->
DOF5.7(2)
*
TSS
---------->
DOF2
--------->
O2
<---------
HSFB2a(2)
---------->
DOF2
<---------
bZIP60(1)
--------->
ARR11(3)
--------->
YAB1
<---------
O2
------->
TEIL
<----------
DOF2
---------
YAB1
<------
ZmHOX2a(1)
--------->
bZIP60(1)
<---------
ARR11(3)
<---------
REM1(1)
--------
DOF2
--------->
HSFC1(2)
--------->
ANAC46
<---------
LBD16
------>
ZmHOX2a(1)
ctttgataaaagaaaagcttcgaaggacacaacttactaaacgacgtcgttaacgcatcgggaacat
ctttctgttcctcgtttcagcgatgtagcagta
13060700
--------->
HSFC1(2)
<---------
HSFB2a(1)
<---------
HSFC1(2)
--------->
HSFB2a(1)
------->
TEIL
--------->
ARR14(2)
<---------
ARR14(2)
--------->
GLK1(2)
<---------
ARR11(1)
<-----------
ARR10
<---------
ARR14(1)
--------->
ATHB12
--------->
ALFIN1
<---------
GLK1(2)
<---------
ICU4
<---------
ANAC46
<---------
CCA1(2)
<---------
YAB1
-----
<---------
ANAC58
--------->
At4g35610
--------->
ICU4
--------->
ALFIN1
<---------
ANAC58
--------->
TOE2(3)
<---------
At4g35610
--------->
LBD16
--------->
ZAT14
<---------
ANAC58
<---------
YAB1
<---------
LBD16
<---------
ZAT14
<---------
ANAC46
------>
ZmHOX2a(1)
<----------
DOF2
<----
--------->
ALFIN1
<---------
ANAC58
--------->
TOE2(3)
------>
ZmHOX2a(1)
<----
gtacccagtggagtggagca
atggcttgccttagccgaatcttccttattctgatgattactatgtcttcttcgtctcctcctttctgttccggtggaag
13060800
--------->
AtMYB61
<---------
MYB111(1)
<------------
AtMYB15
<---------
MYB111(2)
<---------
MYB46(2)
--------->
MYB46(3)
<---------
MYB55(2)
------>
MYB46(1)
------>
MYB83
<---------
ALFIN1
<---------
MYB111(2)
<---------
MYB55(2)
--------->
MYB46(3)
--------->
DEAR3(1)
--------->
ANAC58
--------->
ANAC58
<-----------
GT1
<---------
ICU4
--------->
ICU4
<---------
YAB1
----------->
HVH21
-------->
ATHB1
<-----------
HVH21
--------->
YAB1
------>
MYB46(1)
------
<---------
ICU4
--------->
MYB52(1)
<-----
<--------
HAHB4
--------->
MYB55(1)
<------
ZmHOX2a(1)
------>
GT1
<---------
ATHB12
-------->
P
---------
--
MYB83
--------->
ICU4
<---------
MYB59
------->
TEIL
<---------
LBD16
--
MYB46(1)
--------->
WOX13(1)
------>
MYB83
<----------
DOF2
<----------
DOF2
gtgtatttcaaaatccctcattttgcaatcattatcacccacctacctgtgatacctggtttcttctttctagcgatgaatctagcttttaatccaggat
13060900
-
-
-
-
-
<
<-
---------->
DOF2
------>
ZmHOX2a(2)
--------->
LBD16
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
ARR14(2)
<---------
DAG2
--------->
ZAT2
<---------
ARR11(3)
--------------->
AGL15
<---------
ZAT2
--------->
ARR11(3)
<-----------
GT1
--------->
At4g35610
<---------
ARR14(2)
--->
ARR14(2)
--------->
GLK1(1)
<---------
YAB1
<---------
YAB1
<--
----
ARR14(2)
<---------
GLK1(1)
<---------
YAB1
<-----------
RAV1(2)
<------
ZmHOX2a(1)
>
LBD16
<----------
DOF2
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
CCA1(2)
<---------
TOE2(3)
<
ttgttttctactttttgcag
tcggaaggagctccgagataaagaaattacgagtaagagtgatgatacacaggcgagttatgttttaggatctaaatttg
13061000
------->
MYC3
<-------
MYC3
------->
MYC4
<-------
MYC2
<-------
MYC4
------->
MYC2
--------->
O2
<--------
ABF1
--------->
ANAC55(2)
<---------
O2
========================
bZIP_DOF
<---------
ANAC55(2)
--------->
TGA1a
<---------
TGA1a
<---------
ALFIN1
<------------
OsbHLH66
<---------
REM1(2)
<-----------
HVH21
<---------
ETT(1)
--------->
ANAC58
--------->
ANAC46
----------->
HVH21
--------->
ANAC58
--------->
MYB46(3)
--------->
DEAR3(2)
-------->
TCP20
-------->
ARR14(2)
<---------
WOX13(1)
-------->
TCP16(1)
--------->
ATHB12
-------->
PCF5
<---------
YAB1
<------
ZmHOX2a(1)
-------->
TCP11(2)
<-------
TEIL
<---------
ARR14(2)
--------->
ARR14(2)
---------
PCF2
<---------
MYB52(1)
<---------
ICU4
--------->
TOE1(2)
--------
TCP16(2)
<-----------
RAV1(2)
--------->
YAB1
<---------
ZAT18
-------
ZAT18
<---------
AtLEC2
--------->
MYB59
--------->
ARR11(3)
=======================
HOX2a_HOX2a
---------
ARR14(2)
<----------
DOF2
<-----------
HVH21
<---------
GLK1(1)
<------
ZmHOX2a(2)
-
tggacccgacacgtgttcttcaactttcatggctaccaag
gtcaggtacttctgattgatatctggttctaccatcatggatcatttctgcacataggaa
13061100
<------
NtERF2
--------->
ETT(1)
<-----------
HVH21
<---------
ANAC58
<------
MYB83
--------->
LBD16
<------
MYB46(1)
<---------
ANAC46
<---------
At5g28300
--------->
MYB59
--------->
LBD16
-----
<-----------
GT1
--------->
ANAC58
<---------
LBD16
<------
ZmHOX2a(1)
------>
TEIL
--------->
ANAC58
<----------
DOF2
<---------
ANAC58
<----
tgtatgttttactgcttcaaattttaggggtctgaagcaatttggtatgtatag
ggtctttctataccgcgggttcttgtcggaggaagagtgtgatcat
13061200
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AGI:
At4g25600.1
Description:
ShTK domain-containing protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G28490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49435.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain Metridin-like ShK toxin (InterPro:IPR003582)
Range:
from: 13060668
to: 13062604
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.