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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--
<---
-------
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(3)
<---------
AHL20(2)
--------->
ARR14(2)
<---------
DAG2
<---------
ARR11(3)
<----------
<---------
DAG2
<----------
DOF2
--------->
ARR11(3)
<---------
ARR14(3)
----------->
GT1
<---------
AHL20(2)
<---------
AHL20(1)
--------->
GLK1(2)
--------->
ZAT18
<---------
YAB1
<---------
ANAC46
<---------
ARR11(3)
--------->
ZAT14
<---------
AHL20(2)
--------->
YAB1
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
ZAT14
<---------
AHL20(1)
<--------
ATHB1
=================================
HOX2a_HOX2a
<---------------
AtSPL8
--------->
ARR11(3)
--------->
ICU4
----------->
GT1
<---------
HSFC1(2)
<---------
ANAC55(1)
<---------
ARR11(3)
<---------
ATHB12
==================================
HOX2a_HOX2a
<---------
ANAC46
<----------
DOF2
<-----------
RAV1(1)
<---------
ANAC58
--------->
HSFC1(2)
<-----------------------
TaNAC69(2)
---------->
ID1
<---------
ANAC58
----------->
GT1
--------->
ARR11(3)
acaattaagtgtacagaaaaaccttttggatatatttattgtcgcttttcaatgattttcgtgaaaaggatatatttgtgtaaaataagaaggatcttga
8078400
<---------
ARR11(3)
--------->
ARR14(3)
<---------
ARR14(3)
--------->
ANAC58
--------->
ANAC58
--------->
YAB1
--------->
YAB1
--------->
GLK1(2)
----------->
GT1
<---------
ATHB12
<---------
YAB1
--------->
ARR11(3)
--------->
GT1
------>
MYB83
--------->
ANAC58
--------->
ANAC46
<----
------
ANAC46
------>
MYB46(1)
--------->
ZAT6
--------->
ANAC58
<----
---->
HVH21
--------->
TOE2(3)
--------->
At4g35610
<----------
DOF2
<-----------
ARR10
-
ARR10
--------->
AtLEC2
--------->
WOX13(1)
<---------
ALFIN1
--------->
AHL20(2)
<----
cgggtgtaaaaacatgcacaattcttaatttagaccaatcagaagacaacacgaacacttctttattataagctattaaacaaaatcttgcctattttgc
8078500
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
--------->
GLK1(1)
<---------
TOE1(2)
<---------
LBD16
<---------
ARR11(3)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
RVE1(1)
--------->
YAB1
--------->
CCA1(1)
----------->
HVH21
--------->
YAB1
----------->
GT1
<---------
GLK1(1)
-----
ANAC58
--------->
ALFIN1
--------->
ARR14(2)
-------
-----
ANAC46
----------->
GT1
<---------
ARR14(2)
----------->
RAV1(1)
-----
ANAC58
<---------
ANAC46
<------
ZmHOX2a(1)
--------->
MYB46(3)
ttagaataatatgaagagtgactcatcagggagtggaaaatatctcaggatttgcttttagctctaacatgtcaaactatctagatgccaacaacacaaa
8078600
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
----------->
GT1
--------->
AHL20(2)
----------->
GT1
--------->
AHL20(2)
<---------
YAB1
<---------
YAB1
--------->
DAG2
<---------
AHL20(1)
<----------
DOF2
--------->
YAB1
---------->
DOF2
<---------
ARR11(3)
<---------
GLK1(2)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(1)
--->
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
---------->
DOF2
---
gtgcaaattcttttaatatgaaaacaacaataatatttctaatagaaaattaaaaagggaaataaaatatttttttaaaatatacaaaagaagaaggaat
8078700
<---------
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
CCA1(2)
<-----
---------->
DOF2
--------->
YAB1
<---------
ANAC58
--------->
ARR14(2)
<---------
YAB1
----------->
GT1
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
YAB1
--------->
AHL20(2)
<---------
ANAC58
<---------
CCA1(2)
------>
WOX13(1)
<---------
AHL20(2)
<---------
ANAC58
<---------
CCA1(2)
---------
ccatcatcaaagttttataaaattgtaatataatacaaacttgtttgcttccttgtctctccctctgtctctctcatctctcctatcttctccatatata
8078800
<------
<------
<---------
ARR11(3)
<-------
--------->
ANAC46
<-------
--------->
ANAC58
--------
--------->
ANAC46
--------->
ARR14(2)
--------
--------->
ANAC46
--------->
ARR11(3)
<---------
ARR14(2)
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
RVE1(1)
--------->
ARR14(2)
--------->
ANAC46
<---------
ICU4
--------->
ANAC58
<---------
ARR14(2)
<---------
ALFIN1
------
GT1
--------->
ANAC46
--------->
CCA1(1)
<---------------------
WRI1
<---------
ALFIN1
<-
>
ARR14(2)
--------->
ANAC58
*
TSS
<---------
CCA1(2)
------>
ZmHOX2a(1)
---------
cttcatcttcacacccaaaactccac
acaaaatatctctccctctatctgcaaattttccaaagttgcatcctttcaatttccactcctctctaatataa
8078900
--
--------->
AHL20(2)
<-
---
AHL20(2)
<---------
AHL20(2)
------>
ZmHOX2a(1)
---
YAB1
--------->
ARR11(3)
------>
ZmHOX2a(2)
--
AHL20(2)
--------->
GLK1(2)
===========
--
AHL20(1)
<---------
ICU4
<---------
ARR11(3)
<------
ZmHOX2a(2)
->
AHL20(1)
--------->
ATHB51
--------->
RVE1(1)
------->
TEIL
->
AHL20(2)
--------->
AHL20(2)
--------->
CCA1(1)
<---------
ARR14(2)
----------
GT1
<---------
AHL20(2)
----------->
RAV1(1)
--------->
AHL20(2)
============
>
YAB1
<-------
TEIL
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ARR14(2)
ttcacattttcccactattgctgattcatttttttttgtgaattatttcaaacccacataaaaaaatctttgtttaaatttaaaacc
atggatccttcat
8079000
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ZAT2
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ANAC58
<---------
ARR14(2)
<---------
HSFB2a(1)
--------->
HSFB2a(1)
---------->
DOF2
--------->
ZAT2
<-------
TEIL
<---------
HSFC1(2)
-------
------->
MYB59
<------
ZmHOX2a(1)
<---------
ALFIN1
<----------
DOF2
<--------
--------
TOE2(3)
--------->
HSFC1(2)
<---------
ALFIN1
--------->
TOE2(3)
---------
====================
HOX2a_HOX2a
--------->
MYB46(3)
<---------
CCA1(2)
<---------
AtLEC2
====================
HOX2a_HOX2a
<---------
GLK1(2)
<<<<<<<<<
TBF1
<---------
At4g35610
ttaggttcattaaagaggagtttcctgctggattcagtgattctccatcaccaccatcttcttcttcatacctttattcatcttccatggctgaagcagc
8079100
<---------
ARR14(3)
--------->
MYB46(3)
<
<---------
At4g35610
--------->
ARR11(3)
--------->
AtMYB61
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
ANAC46
<---------
ATERF1(1)
<---------
ANAC58
-->
RAP2.6(2)
--------->
At4g35610
<---------
ARR11(3)
------>
NtERF2
<---------
ANAC58
-
At4g35610
----------->
RAV1(1)
--------->
ARR14(3)
<---------
ALFIN1
<---------
bZIP60(2)
>
At4g35610
--------->
MYB46(3)
--------->
MYB46(3)
------->
TEIL
---------->
DOF2
--
cataaatgatccaacaacattgagctatccacaaccattagaaggtctccatgaatcagggccacctccatttttgacaaagacatatgacttggtggaa
8079200
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
HSFB2a(2)
-
<---------
ANAC58
<----------
DOF2
-
<---------
bZIP60(2)
--------->
ATHB12
--------->
ANAC58
<--------
--------->
YAB1
<-------
TEIL
================================
HOX2a_HOX2a
<---------
ATHB12
<----------
DOF2
------>
ZmHOX2a(2)
---------
------>
MYB83
<---------
ANAC46
--------->
At4g35610
--------->
ANAC58
<--------
------>
MYB46(1)
--------->
YAB1
=================================
HOX2a_HOX2a
--------->
WOX13(1)
--------->
ARR14(2)
<------
ZmHOX2a(2)
<---------
TOE1(2)
--------->
MYB46(3)
<---------
ARR14(2)
--------->
PCF2
<---------
HSFB2a(2)
---
-------
TEIL
<---------
ICU4
--------->
GLK1(1)
<---------
ARR14(2)
------>
ZmHOX2a(1)
------->
CCA1(2)
<---------
ANAC58
--------->
MYB52(1)
--------->
ARR14(2)
--------->
ZAT6
--------
gattcaagaaccaatcatgtcgtgtcttggagcaaatccaataacagcttcattgtctgggatccacaggccttttctgtaactctccttcccagattct
8079300
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AGI:
At3g22830.1
Description:
AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B); DNA binding / transcription factor. Identical to Heat stress transcription factor A-6b (HSFA6b) [Arabidopsis Thaliana] (GB:Q9LUH8); similar to ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G26150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22596.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Helix-turn-helix, Fis-type; (InterPro:IPR002197); contains InterPro domain Heat shock factor (HSF)-type, DNA-bindin
Range:
from: 8078827
to: 8081058
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.