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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
YAB1
--------->
YAB1
<---------
MYB46(3)
<---------
AHL20(1)
--------->
At5g28300
<---------
--------->
AHL20(2)
<---------
At5g28300
--------->
ANAC58
--------->
TOE1(3)
<---------
TOE2(3)
--------->
ANAC58
<---------
ANAC46
--------->
MYB52(1)
<---------
TOE1(2)
<---------
TOE2(3)
----------->
GT1
<---------
ZAT6
--------->
GLK1(1)
<---------
DOF5.7(2)
<-----------
GT1
<---------
DOF5.7(2)
<---------
GLK1(1)
--
tcattaacgtgaaacaatattattttgttatttactagtgaagaaaattaacggtgagtgataaatcagaagtctaaaatggatttctaggttacgacaa
2833000
<---------
ANAC58
<---------
ANAC58
<----------
DOF2
--------->
GLK1(1)
----------->
GT1
<----------
DOF2
--------->
AHL20(2)
<---------
At4g35610
<-----------
GT1
--------->
AHL20(2)
<---------
TOE1(2)
----------->
GT1
<----------
DOF2
-
ID1
--------->
AHL20(2)
--------->
At4g35610
<---------
DAG2
--------->
YAB1
-------
------->
AHL20(2)
<---------
GLK1(1)
<---------
ANAC46
<-----------
GT1
<---------
YAB1
<----------
aaaaaataaaaaaaaatggatttctaggttagctttcttgggtagagaaataagtttacttttcactttcagttttcattatccattgaatgggtcatga
2833100
------>
NtERF2
--------->
ANAC46
--------->
ANAC58
--------->
ZAT14
--------->
ANAC58
--------->
ZAT18
<---------
LBD16
<---------
ZAT14
>>>>>>>>>>
E2Fb
<---------------
AtSPL8
<---------
GLK1(1)
---------->
DOF2
------->
TEIL
----------->
HVH21
--------->
YAB1
--------->
ICU4
----------------->
AGL1
<---------
ATHB12
<---------
MYB52(1)
---------->
DOF2
-
-->
ICU4
===================================================================
-
HVH21
----------->
GT1
----------------->
AGL3
--------->
LBD16
--------->
LBD16
---
agaggcctgatatggtgaataatgggcttaaataggcccaataaaagtacttagtccaccggtaatgaatttcccgccatagaagaaagtcatcaacttc
2833200
<----------
DOF2
<---------------
AGL15
<---------
ANAC58
<---------
ANAC58
==================================================================================
MADS_MADS
------>
ZmHOX2a(2)
--------->
ARR11(3)
<------
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR14(2)
----------->
GT1
--------->
ARR14(3)
--------->
CCA1(1)
<---------
WRKY18(1)
<---------
TOE1(3)
<---------
ARR14(3)
--------->
RVE1(1)
--------->
WRKY38(1)
<---------
TOE2(3)
--------->
ARR11(3)
<---------
MYB59
--------->
WRKY12
<---------------
AGL15
<-----------
ARR10
--------->
TOE2(3)
--------->
WRKY45
<---------
YAB1
<---------
ARR14(2)
<-----------
GT1
--------->
DAG2
--------->
ICU4
---------->
ARR10
<<<<<<<<<
GT-1
<---------
TOE2(3)
--------->
MYB52(1)
--
=======================
MADS_MADS
---------->
DOF2
<---------
DOF5.7(2)
--------->
AHL20(2)
------>
LBD16
--------->
ANAC55(2)
--------->
LBD16
---------->
DOF2
<------
ZmHOX2a(1)
---------->
DOF2
cgaagatcttccgttttaagtgatttacctaaatatcccccaaaaaaggttgaccaaaagttaagacagaggataacgattaagggtaacaaagtaaatg
2833300
--------->
ANAC58
--------->
ANAC46
--------->
LBD16
--------->
ANAC46
--------->
LBD16
<------
ZmHOX2a(2)
-
<---------
ARR14(2)
------
<---------
ARR11(3)
------
--------->
ARR14(3)
------>
NtERF2
--------->
ARR11(3)
----------
----------->
GT1
--------->
ANAC58
------->
TEIL
--------->
ANAC55(2)
---------->
DOF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ANAC46
<----------
ID1
<---------
AHL20(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
O2
--------->
YAB1
----------->
GT1
--------->
ARR14(2)
--------->
GLK1(2)
--------->
ANAC58
<---------
ATHB51
--------->
AHL20(2)
--------->
LBD16
<-----------
ARR10
--------->
ANAC58
--------->
ICU4
--------->
YAB1
---------->
DOF2
--------->
ANAC58
---------->
DOF2
<---------
O2
------->
WOX13(1)
<---------
AHL20(2)
<---------
LBD16
<---------
SPL7
---------->
DOF2
<---------
REM1(2)
gcaattataagggcaaaatagtaattaaaaggaataaaagatcccccgaaacacaagccctacgaatctagtcgaaagagcgagtgtgttcacgcgacct
2833400
<------
MYB83
--------->
MYB111(1)
<---------
MYB46(3)
--------->
MYB55(2)
--------->
MYB46(2)
--------->
MYB111(2)
<---------
TOE1(2)
<---------
MYB55(1)
------>
ZmHOX2a(2)
<--------
P
<------
ZmHOX2a(2)
<---------
MYB52(1)
<---------
ARR11(3)
<---------
LBD16
--------->
ARR11(3)
-------
--------->
ARR14(2)
--------->
GLK1(1)
<---------
TOE2(2)
*
TSS
<---------
ARR14(2)
<------
NtERF2
<------
ZmHOX2a(2)
-------->
ANAC46
<---------
ZAT6
<------
MYB46(1)
<------
NtERF2
<---------
ARR14(2)
--->
TOE2(3)
----------->
GT1
--------->
HSFC1(2)
--------->
ARR14(2)
--->
AtMYB61
<---------
At5g28300
<---------
HSFC1(2)
------>
ZmHOX2a(2)
--------
->
HVH21
<----------
DOF2
--------->
LBD16
<---------
At4g35610
--------->
TOE1(2)
<------
caa
cgagactcaacgcttttacagttaaatccggtaggtgagagagagagagagaagggaagctt
atggaggcagagatcgtgagacgatcggaggtaac
2833500
--------->
O2
<---------
ANAC46
<---------
O2
--------->
ALFIN1
<---------
TGA1a
=================================
MYC_MYB
<---------
DEAR3(1)
--------->
ATERF1(1)
<------
NtERF2
<---------
RAP2.3(1)
------>
NtERF2
<---------
ARR14(2)
<---------
ERF1
----------->
ARR10
<---------
ORA47(2)
----------->
GT1
<---------
RAP2.3(2)
<---------
MYB52(1)
--------->
GLK1(2)
<---------
RAP2.6(2)
<---------
MYB46(3)
<---------
HSFC1(2)
--------->
ATERF1(2)
--------->
MYB55(2)
<---------
HSFB2a(1)
<---------
RAP2.3(3)
--------->
MYB52(2)
<------
MYB46(1)
<---------
ATERF1(2)
<-------
TEIL
<------
MYB83
--------->
TOE2(3)
<---------
ANAC46
--------->
ARR11(1)
--------->
MYB111(2)
<---------
RRTF1(2)
<-----------
RAV1(2)
--------->
ALFIN1
<---------
DREB2C(2)
<------
NtERF2
<---------
AtMYB61
<---------
RRTF1(3)
<---------
RAP2.6(2)
-->
MYB52(1)
<---------
ANAC46
<---------
DEAR3(1)
<-------
TEIL
<-------
GAMYB
--->
HVH21
<---------
DEAR3(1)
<---------
AtMYB61
--------->
ALFIN1
<------
NtERF2
---
DOF5.7(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
ATERF1(1)
<---------
LBD16
gggattaagaagggaggtggaagaatcgtcaattggtagaggagattgcgatggtgatggcggcgatgtgggagaagatgcggcagggttcgttgggacg
2833600
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
ZAT2
<---------
ANAC46
--------->
At4g35610
<---------
ANAC58
<---------
ZAT18
<---------
ANAC58
--------->
ALFIN1
<---------
ANAC58
<---------
DEAR3(1)
<------
ZmHOX2a(1)
<---------
At4g35610
<---------
ARR14(2)
===================================
HOX2a_HOX2a
--------->
ZAT18
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
MYB46(3)
<---------
ANAC46
<------
MYB83
================================
HOX2a_HOX2a
<---------
ANAC58
<------
MYB46(1)
=================
HOX2a_HOX2a
--------->
ALFIN1
<---------
ANAC58
<--------
P
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
ALFIN1
agcgggagaggaagaagagatcgagttaaagggccgtggtcgaaggaggaggatgatgtgttgagtgagctcgttaagaggttgggagcgaggaattgga
2833700
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC58
<---------
At4g35610
--------->
ANAC58
--------->
ANAC58
--------->
At4g35610
--------->
ANAC46
--------->
ANAC58
<------
MYB83
--------->
ARR14(2)
--------->
ANAC58
<------
MYB46(1)
<---------
ARR11(1)
--------->
ANAC46
<---------
AtMYB61
<---------
ARR11(3)
<---------
MYB46(3)
<---------
MYB52(1)
<---------
CCA1(2)
<----
<-----------
GT1
------>
ZmHOX2a(1)
---------->
ID1
--------->
ZAT2
--------->
ANAC55(2)
gttttatcgctcggagtattcctggtcgttcaggcaagtcttgtcgtcttcgttggtgtaatcagctcaatccaaatcttatacgcaattcatttactg
g
2833800
------>
ZmHOX2a(2)
--------->
ARR11(3)
<----------
DOF2
<---------
ARR11(3)
<---------
At4g35610
<-----------
GT1
------>
ZmHOX2a(1)
--------->
At4g35610
<-----------
GT1
=============
HOX2a_HOX2a
<-------
TEIL
<
-----
MYB52(1)
<---------
AHL20(2)
<-----------
GT1
<----------
DOF2
<---------
YAB1
<--
tattttctctcttttgaaagtattcaatttcaattggtgattccatttttcctgtgatcttctcttttttttttgagttttgattcatctgtgttgaatt
2833900
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AGI:
At3g09230.1
Description:
ATMYB1 (MYB DOMAIN PROTEIN 1); DNA binding / transcription factor. similar to MYB109 (myb domain protein 109), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G55730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15749.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 2833404
to: 2835344
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.