Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                             ------->TEIL                                                                                           <---------ZAT18                                                                                  <---------ANAC58 ----->ZmHOX2a(1)                                       ------->GAMYB             <---------ANAC58 ---ARR11(3)                                           <---------MYB52(2)   <---------ARR11(3)------- ->ZAT2                       <---------bZIP60(2)    --------->MYB52(1)     --------->AHL20(1)------- >ANAC58           --------->GLK1(2)     --------->GLK1(1)    ---------->DOF2<---------AHL20(2)<----- >ANAC58  ------>ZmHOX2a(1) <------ZmHOX2a(1)        <-----------GT1        <---------AHL20(1)-------   tcctctcatgtcctgaatgagactcttgaaggacatggctctgaattctaactaataacgaactagaagcagtctctatatatttcttggtaatgcacct  19619900                                                                ------->GAMYB                                                               <---------MYB52(2)                  <x                                                               --------->MYB46(3)             <------                                                          ------>ZmHOX2a(2)                 <--------                                                         <------ZmHOX2a(2)                -------->ATHB1                                                         =================================HOX2a_HOX2a  ---------->DOF2                                       --------->ARR11(3)                <---------ICU4 -->MYB83                                               <---------ARR14(3)               <---------ATHB51 -->MYB46(1)                                            <---------ARR11(3)               --------->AHL20(2) ----MYB46(2)                                     --------->MYB52(1)                     --------->ICU4 ----MYB59                                       --------->TOE1(2)                       <---------AHL20(2) -->ANAC58                                      --------->MYB46(3)                 ------>ZmHOX2a(1) -->ANAC58                --------->TOE2(3)     <---------MYB52(2)           --------->ANAC58 ------- ----MYB111(1)<----------DOF2        ----------->RAV1(1)--------->ARR14(3)   --------->ANAC58-------- -->ANAC46    <---------DAG2        ----------------->AGL2================================HOX2a_HOX2a   aattcaaagttgcagactttttcaagaaccctaataaacccacattcggaacgaacgagatctcaacgaactaaaacacaagctcctccaaattattaaa  19620000                                                                                  <-------TEIL                                                                                 --------->CCA1(2)                                                                                --------->ARR14(2)                                                                              --------->LBD16                                                                            <---------LBD16                                                          ----------------->AGL3<---------ARR14(2)                                                          ------>ZmHOX2a(2)--------->CCA1(2)                                                         <------ZmHOX2a(2) <------ZmHOX2a(2)                                                         --------->CCA1(2)--------->ARR14(2)                                        -------->P       --------->ARR14(1)--------->ARR14(1)        --------->ANAC46                <-----------------AGL1<---------YAB1------>ZmHOX2a(2)        --------->ANAC58   --------->ARR11(3)           <---------ARR11(3)--------->ARR11(3)     ---- xxxxxxxxxxxxxxxsmallRNA(i)--------->AGP1               --------->ARR14(2)--------->ARR11(1)     ---- ---AHL20(2)              --------->At4g35610           --------->AGP1   --------->GLK1(1)       ---- -YAB1  --------->ANAC58  <---------At4g35610           <---------ARR14(2)<---------ARR14(2)    <---- -->AHL20(2)      <-----------GT1 --------->ZAT18       --------->ARR11(3)--------->AGP1   <---------ICU4 ->AHL20(2)   <---------YAB1<------ZmHOX2a(2)      <-------TEIL          <---------GLK1(1)--------->AHL20(2)   aaaaaaaaacacgcttcttattacattcagatcaagagtactaacccaataggtacaagatccgattatagatagagatccggatacagagaataaatac  19620100                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                               --------->ZAT2          --------->ANAC58                                                 --------->ALFIN1          --------->ANAC58                                               <---------ZAT2   --------->GLK1(1)                                                     --------->ZAT2   <---------GLK1(1)        <------NtERF2                              <-----------RAV1(2)         -- ----->TOE2(3)             --------->RAP2.6(2)<-----------GT1       --------->GLK1(2)             <-- ----->TOE2(2)       ---------->DOF2     --------->ANAC58           --------->ARR14(2)           ---- ----->TOE1(2)    --------->AHL20(2)     --------->ANAC58           <---------ARR14(2)  --------->ZAT6 -----ANAC55(2)   <---------AHL20(2) <-----------GT1            --------->YAB1 <---------ZAT2    <---   ctaagaaatcccaagcgaaattaaaaaggccgcatcgattcacaagttatacgagcttcacatcaataagaatccaggtggagcttgggaacagtaccca  19620200                                     ---------->DOF2                                 <<<<<<<<<TAC1                               <---------ALFIN1                               --------->ZAT6                              -------->P       --------->ALFIN1       ------>MYB83     --------->ARR14(2)       ------>MYB46(1)     <---------GLK1(2)       ----------->RAV1(1)     <---------ARR14(2)     ------->GAMYB                    --------->ANAC46             *TSS  <-----------RAV1(2)       --------->AtMYB61              ----------->RAV1(1)           --------->ARR11(3) <-----------------AGL1    <---------MYB52(2)             ------->GAMYB        <---------At4g35610 ----------------->AGL1    --------->MYB46(3)           --------->ANAC58       --------->At4g35610 ------->PCF2             --------->ANAC58              --------->ANAC46     <---------WRKY12  <----- ---------HVH21           --------->ANAC58              --------->ANAC58   <-----------HVH21   <----- ----->ZAT2             --------->MYB46(3)          <-----------GT1  ---------->DOF2     <---------ARR11(3) ------ZAT2   <------NtERF2<---------MYB55(2)    <----------DOF2   >>>>>>>>>TBF1  <------ZmHOX2a(1) -   ggtcccagattggggcatcgaaatcgacaaccaacactcgaaagcgaatgccttttacaacccacagaagaagaagcggtcagaggaaatagattttagg  19620300                                                                                                   <-         ----------->GT1                                                                      <------         <---------ANAC46                                                                --------->AHL20(1)    <---------LBD16                                                  <------------CBF    <---------AHL20(1)   <---------ANAC46                                                <---------AHL20(2)    <---------AHL20(2)  <---------LBD16                                     <---------ANAC58                   --------->AHL20(2) ----TOE2(3)                                          <---------ANAC58        --------->WOX13(1) <--- ----TOE1(3)                               <---------ATHB12        <---------YAB1 --------->WOX13(1)< ---------->HVH21   ------->TEIL       ------------>CBF   ---------->ID1   <-----------HVH21<--------   gtttgacgggggagtgaatatgtatgtctgtctctgtgttatccaatcgcttccttccttgtctcatttttaattgttgtcagtcagtcattttattatt  19620400                         ----------->GT1    <---------ICU4       <------MYB46(1)   --------->ICU4        <------MYB83   <---------YAB1       --------->MYB59 --------->YAB1   <---------------AGL15                      <---------ARR14(2) <--------HAHB4   --------------->AGL15                      --------->ARR14(2)                <----- <---------ICU4  <-----------------AG <-----------GT1   <---------At5g28300                   ------- ----------GT1   ----------------->AGL2                <-----------GT1                   --------->AHL20(2) ---AHL20(2)     <-----------------AGL1                <---------WRKY18(1)               <---------AHL20(2) ------AHL20(2)  ----------------->AGL3               --------->WRKY12               <----------DOF2 ---------YAB1   <-----------------AGL3              <---------WOX13(1)        --------->At4g35610 -YAB1           <-----------------AGL2           <---------YAB1  <-----------GT1   <---------DAG2   ttatcattattttcttcaaactaaatttggtaacaaagttttacatttcattctaattgaccgtattcttaccgatttatcttctgcctttttaattaag  19620500                                        --------->At4g35610                                        <---------ZAT2                                 <---------AHL20(1)                                 <---------AHL20(2)                                 --------->AHL20(1)                        --------->YAB1  <---------At4g35610                    --------------->AGL15        <---------YAB1                    <---------------AGL15      --------->O2   ---------->DOF2           ---------->DOF2       --------->AHL20(2)  --------->MYB52(1)<----------DOF2       ---------->DOF2 <---------ATHB51 --------->ZAT2       --------->AHL20(2)      <---------AHL20(2)--------->AHL20(2)   ----------->RAV1(1)   <---------ZAT18 ----TOE2(3)       ----------------->AGL3  ------>NtERF2     <---------AHL20(2) ------->TEIL -->MYB52(1)    <----------DOF2 --------->AHL20(2)--------->YAB1   --------->ZAT18     <----------DOF2   ggatatatataaagaaagcttttcaattatagaaataaattaagctgccacatgataacgaaattaaagtgtgctttctatgtatttctctttctcgttg  19620600                                                                             <---------ARR11(3)                                                                        <XXXXXXXXXXXXXXXXXXXXMIR867                                                                    --------->GLK1(2)                                                                   <---------GLK1(2)        ---------                      --------->HSFB2a(2)                        ----------->ARR10         <-------TEIL                      <---------HSFC1(1)                    ------->GAMYB   --------->CCA1(1)                      --------->HSFC1(1)                  <---------At4g35610--------->GLK1(2)                --------->ICU4                            --------->At4g35610--------->ARR11(3)  <----------DOF2     <---------HSFB2a(2)              --------->At5g28300  --------->RVE1(1)       -   ttatcttttgttttggtaatgtttctagaaatgttggaacttcaccgaaataaacatggtaactgactagattctaaaaaatcttgttcaaaattcatca  19620700                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                  <-----------GT1                                                                         ---------->ID1                                                                         <-----------GT1                                                                        <-----------GT1                                                                       ----------------------->TaNAC69(2)                                                                     <---------MYB52(1)   --------->YAB1          <---------At4g35610                                      <---------ANAC58 --------->ANAC46 <---------AHL20(2)                                                <---------ANAC58 --------->ANAC55(2) >YAB1    --------->At4g35610                                  <----------DOF2<----------DOF2 -------->AHL20(2)--------->CCA1(2)       <----------DOF2  <----------DOF2  ------>ZmHOX2a(1)   tataaaatagacatctgaagataagaagacttacaaatagaatactttggtttaatggaaactttctttccgtttttcctctttttacgcaattgtattt  19620800  Previous    Next  AGI:  At2g47900.1    Description:  AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor. Identical to Tubby-like F-box protein 3 (TULP3) [Arabidopsis Thaliana] (GB:Q8VY21;GB:O82257); similar to AtTLP10 (TUBBY LIKE PROTEIN 10), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G25280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22416.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 19618013    to: 19620290    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.