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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
GAMYB
--------->
DEAR3(1)
--------->
DREB2C(2)
<------
NtERF2
--------->
MYB46(3)
--------->
ATERF1(1)
--------->
DEAR3(2)
--------->
DEAR4(2)
<---------
LBD16
--------->
LBD16
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
------>
ZmHOX2a(2)
<-------
TEIL
<---------
ATERF1(1)
<-----------------------
TaNAC69(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
ARR14(2)
--------->
AGP1
------>
NtERF2
--------->
ARR11(3)
--------->
ARR14(2)
--------->
ABI4(1)
------>
ZmHOX2a(1)
<---------
ALFIN1
==================
HOX2a_HOX2a
=================
HOX2a_HOX2a
==============
HOX2a_HOX2a
--------->
DEAR3(1)
==========================
HOX2a_HOX2a
<---------
MYB46(3)
------>
ZmHOX2a(1)
<---------
ARR11(3)
------>
NtERF2
--------->
ALFIN1
===========================
HOX2a_HOX2a
--------->
RAP2.6(2)
--------->
ATHB12
==============================
HOX2a_HOX2a
--------->
DEAR3(1)
<---------
ICU4
=============================
HOX2a_HOX2a
--------->
RAP2.3(1)
<---------
YAB1
=================
HOX2a_HOX2a
--------->
ANAC58
--------->
YAB1
------>
ZmHOX2a(1)
----------->
ARR10
--------->
ABI4(1)
<---------
ICU4
<
-->
NtERF2
------>
ZmHOX2a(2)
--------->
ANAC58
--------->
YAB1
--------->
ALFIN1
-
----
ANAC58
----------->
RAV1(2)
<---------
ARR14(2)
--------->
GLK1(1)
<------
ZmHOX2a(1)
<--
----
ANAC58
--------->
ARR11(3)
--------->
ARR14(2)
--------->
YAB1
<---------
DEAR3(1)
<--------
ggctctcctcctattgatcctgaaccaagatccgtggaatcgccaccgccgaaatcagaattcatcatcatcggtggaggagttggagttggagttgttg
17105400
----------------->
AGL1
------>
ZmHOX2a(2)
===============================
<----------
DOF2
<-----------------
AG
<------
ZmHOX2a(1)
--------->
ABI4(2)
<------
ZmHOX2a(1)
--------->
ALFIN1
--------->
MYB55(2)
<---------
ICU4
<---------
ANAC46
<---------
MYB46(3)
--------->
ATHB12
---------->
DOF2
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
ICU4
--------->
ARR14(2)
---------
AtMYB61
<---------
LBD16
=======================
HOX2a_HOX2a
-------->
ALFIN1
--------->
GLK1(2)
--------->
ALFIN1
<---------
YAB1
<---------
ARR14(2)
-------
ANAC46
<---------
HSFC1(2)
<---------
AtMYB61
--------->
ICU4
<-----------------
AGL1
-
-
MYB46(3)
--------->
HSFC1(2)
<---------
DEAR3(1)
--------->
LBD16
<---------
GLK1(1)
<-
gagtggtggaggattgaagcttctggtgataaatcgcggtggttctctttgatccgagatgatgattaggacttccgatttggaaagcgagagctagatg
17105500
<---------
TOE2(3)
--------->
ANAC46
<---------------
AGL15
<---------
At4g35610
<---------
TOE2(3)
<---------
HSFB2a(2)
----------------->
AGL1
<---
<---------
TOE1(3)
--------->
HSFB2a(2)
----------------->
AGL3
<-----------
ARR10
--------->
ATHB12
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ICU4
<---------
ARR11(3)
<---------
ARR11(3)
<------
ZmHOX2a(1)
----
=========================================================================
MADS_MADS
----
---------->
GT1
--------->
CCA1(2)
--------->
LBD16
<-----------------
AGL1
<---------
ARR11(3)
<
-----
ZmHOX2a(1)
--------->
CCA1(2)
<---------
LBD16
----------------------->
TaNAC69(2)
<---
aggagtgattaaggtttgagagatagggatgagttcttctggagatggaagctcttcttcccatctaaggaaccaatttggattatcttctctcat
tcta
17105600
--------->
LBD16
--------->
At4g35610
<---------
At4g35610
<---------
LBD16
<---------
ERF1
--------->
ATERF1(1)
<---------
At4g35610
<------
NtERF2
<-------
GAMYB
--------->
ZAT2
--------->
At4g35610
<---------
ZAT2
<---------
ERF1
<---------
DEAR3(2)
<---------
RRTF1(1)
<---------
RAP2.6(1)
<---------
ATERF1(1)
------>
NtERF2
<---------
RAP2.3(1)
<---------
DEAR3(1)
<---------
RAP2.6(2)
<------
NtERF2
<---------
ATERF1(1)
------>
NtERF2
<---------
RAP2.3(1)
<---------
RRTF1(1)
<---------
ERF1
<---------
O2
--------->
ATERF1(2)
<---------
ATERF1(2)
<---------
DEAR3(1)
<---------
RAP2.6(2)
<---------
RAP2.3(2)
<---------
RRTF1(3)
--------->
ANAC58
<---------
RRTF1(2)
==================
HOX2a_HOX2a
<---------
ANAC46
------>
ZmHOX2a(2)
<---------
RAP2.3(3)
<---------
AGP1
----------->
HVH21
=====================================
HOX2a_HOX2a
----------->
TGA1
<------
ZmHOX2a(1)
--------->
ARR14(2)
----------->
HVH21
<------
NtERF2
<---------
ARR11(3)
--------->
At5g28300
<---------
ANAC46
<---------
ARR14(2)
<---------
ANAC46
<---------
MYB46(3)
--------->
ARR11(3)
<---------
DEAR3(1)
<---------
DEAR3(1)
--------->
ALFIN1
---------->
DOF2
--------->
ICU4
------
ZAT2
<---------
bZIP60(1)
<---------
HSFB2a(2)
<------
ZmHOX2a(1)
<---------
YAB1
----->
ZAT2
--------->
RAP2.6(3)
<---------
TOE1(1)
--------->
ANAC58
--------->
ICU4
----->
At4g35610
<---------
RAP2.3(3)
<-------
TEIL
<----------
DOF2
----------->
GT1
---------
LBD16
--------->
ATERF1(1)
===========================
HOX2a_HOX2a
--------->
TOE1(2)
------
At4g35610
<---------
RAP2.3(2)
<------
ZmHOX2a(1)
<---------
CCA1(2)
--------->
MYB52(1)
<--------
gctgcggtgatagtgacggcggctgcggaggaagacggaggagagaggttcgaggtggatcttttggtaaggaaaagaacgaaggaagtagttattattt
17105700
<-----
<-----
------
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC46
<---------
LBD16
---------->
DOF2
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
HSFB2a(2)
<---------
ARR11(3)
XXXXXXXXXXXXXXXXXXX>
MIR3434
<---------
HSFB2a(2)
<---------
GLK1(2)
<---------
WOX13(1)
<---------
ANAC55(2)
<---------
YAB1
<---------
AHL20(2)
--------->
ATHB12
*
TSS
<---------
ARR14(2)
<---
-
AHL20(2)
----------->
ARR10
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
<-------
GAMYB
------
gtgaatattggctagattttatatatggaggaaagagagtgattggctgattccatttctctcgaataatgtg
ttcatggggttatggaacacggaataa
17105800
<---------
YAB1
<---------
ICU4
--------->
ICU4
<---------
ATHB12
<---------
ICU4
<----------
DOF2
<---------
YAB1
--------->
YAB1
----
AHL20(2)
<------
ZmHOX2a(1)
--------->
YAB1
----
AHL20(1)
----------->
GT1
--------->
YAB1
--------->
YAB1
-
--->
AHL20(1)
---------->
DOF2
--------->
GLK1(1)
--------->
AHL20(2)
<--
---------
CBF
<---------
AHL20(2)
<------------
CBF
----------->
GT1
--------->
ICU4
<--------
--->
AHL20(2)
--------->
AHL20(2)
--------->
ATHB12
---------->
DOF2
----------->
GT1
<---------
attgttgagtctttattaaaaatacaaagaggataattgagaaatcataactcaaaagtagtaagaaaatagtaataatgtgagcatatgaactgtcatt
17105900
<---------
DEAR3(2)
<------
MYB83
<------
MYB46(1)
<---------
AHL20(2)
--------->
MYB59
--------->
AHL20(2)
<---------
LBD16
<---------
AHL20(2)
<---------
At5g28300
<---------
AHL20(1)
-------->
WOX13(1)
--------->
AHL20(1)
-------
YAB1
<-------
TEIL
<---------
ANAC58
--------->
AHL20(2)
-
YAB1
<---------
SPL7
<---------
ANAC58
--------->
AHL20(2)
--
HVH21
<---------
MYB52(1)
--------->
AtLEC2
<---------
AHL20(2)
gtcattcacggttcggttcatggcatccaaattgccagtttttgttttccatgcgaattgtttgcctctagtttttttaatttatttgtagtgactaaat
17106000
<---------
TOE2(3)
--------->
MYB59
--------->
TOE2(2)
<---------
TOE1(2)
--------->
TOE1(2)
<---------
TOE2(2)
--------->
AHL20(2)
--------->
ICU4
--------->
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
<--------
ATHB1
<---------
AHL20(1)
<---------
ICU4
--------->
ALFIN1
--------->
AHL20(2)
<-
<---------
ATHB12
<---------
ANAC46
<---------
ATHB12
--------
--------->
ICU4
--------->
ATHB51
<---------
YAB1
>>>>>>>>>
MYB98
---------
<---------
ATHB51
--------->
YAB1
--------->
YAB1
----------->
GT1
------>
ZmHOX2a(2)
<-
tgcaataattcttaggtagaaaacaataatcgatagtgtgtgagtatcaattttgatcaataaattagtaacataagaattgatcgcataagaatgcgcc
17106100
--------->
ATHB12
--------->
bZIP60(1)
<---------
bZIP60(1)
<---------
DDF1
<---------
RAP2.6(3)
--------->
RAP2.6(2)
--------->
DEAR3(1)
--------->
RAP2.3(3)
<---------
ETT(1)
--------->
RAP2.3(2)
----------->
HVH21
--------->
DREB2C(2)
--------->
RAP2.3(1)
----------->
HVH21
<---------
At4g35610
--------->
TOE2(3)
--------->
At4g35610
--------->
TOE1(3)
--------
ATHB51
--------->
ATHB12
<---------
DAG2
--------->
TOE2(3)
->
ANAC46
------>
NtERF2
<---------
YAB1
--------->
GLK1(2)
---------->
DOF2
-
>
ZAT18
--------->
DEAR3(2)
--------->
DAG2
<------
NtERF2
<---------
YAB1
<---------
GLK1(1)
--------
ATHB12
---------->
DOF2
--------->
ANAC46
<---------
YAB1
--------->
GLK1(1)
aatagttgagccgacatcatttgaataaaaagtatatgattagattacaccgaaggcagagaaccttatgagttatgacagaaagaagaaatctcaatct
17106200
--------->
ATHB12
-------->
ATHB1
--------->
YAB1
<---------
ICU4
<---------
ATHB12
<-------
--------->
ICU4
<---------
TOE2(3)
<---------
YAB1
<---------
TOE1(3)
<---------
ICU4
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
<---------
ICU4
<-----
--------->
YAB1
<----------
ID1
<---------
YAB1
------
--------->
AHL20(2)
<---------
ICU4
--------->
LBD16
--------->
ICU4
-------
--------->
YAB1
<---------
YAB1
--------->
LBD16
--------->
ICU4
--------
<---------
AHL20(2)
--------->
ICU4
--------->
TOE2(3)
<---------
YAB1
<------
ZmHOX2a(1)
--------->
AHL20(2)
------>
ZmHOX2a(1)
---------->
DOF2
<---------
At4g35610
<------
-------->
TOE2(3)
<---------
ZAT18
--------->
TOE1(3)
---------->
DOF2
<---------
YAB1
tacattaaaataataatcattgtgtcctcattaagacgaaaaccataaatcccgaatatttctctaagtttaaagagagatgattattaattaaggatat
17106300
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AGI:
At2g40970.1
Description:
myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10760.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABN09175.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:
from: 17104628
to: 17105773
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.