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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ATHB12
<---------
YAB1
<-----------
GT1
<---------
CCA1(2)
------>
ZmHOX2a(1)
<---------
ICU4
--------->
LBD16
--------->
ANAC58
--------->
AtMYB61
<---------
LBD16
--------->
ANAC58
<---------
ALFIN1
--------->
ARR11(3)
<---------
ALFIN1
--------->
bZIP60(2)
<---------
ARR11(3)
----------->
HVH21
--------->
ANAC46
<---------
GLK1(1)
<---------
GLK1(2)
->
AtMYB61
--------->
ZAT6
<---------
ALFIN1
--------->
TOE2(3)
------->
TEIL
attctccaaaactgacactcctcgtttctccacctcaccattgctctgagacttaacctttgatatctccgtatgtaccatcaaattctccataactccc
9673700
--------->
ANAC46
--------->
ANAC55(2)
----------->
RAV1(1)
<---------
ANAC55(2)
--------->
MYB46(3)
--------->
ANAC58
<---------
MYB52(2)
<--------
ATHB1
--------->
WOX13(1)
--------->
YAB1
--------->
GLK1(2)
<---------
YAB1
----------->
GT1
<---------
ATHB12
--------->
YAB1
--------->
ANAC46
<---------
YAB1
--------->
TOE2(3)
--------->
ANAC58
--------->
AtLEC2
------->
GAMYB
<---------
ICU4
<---------
GLK1(2)
<---------
ATHB51
<----
atttccat
tcacaat
ctatcaacaaacaacaaaacatcatcactataaacagattgttaaaccacaaatgttcaataatacgaaactgtttcatccattt
9673800
<--
---
--------->
TOE1(2)
-----
<---------
ARR11(3)
------
--------->
ARR11(3)
------
<---------
CCA1(2)
--------->
GLK1(1)
------
<----------
DOF2
<---------------------
WRI1
--------->
ANAC46
<-----------
GT1
---------->
DOF2
--------->
MYB52(1)
--------
-----
AHL20(2)
--------->
ARR14(2)
--------->
TOE2(3)
--------->
TOE2(2)
--------->
AHL20(2)
ttttttctttctcaaatctaatttcagaattcgatttcgcagaaacaaaaacttaatcaaagacgatatctacgaagaaacgaagattaaatacacaacg
9673900
------>
ZmHOX2a(2)
--------->
AGP1
<---------
ARR14(2)
<-----------
ARR10
--------->
ARR14(3)
<---------
ARR14(3)
--------->
ARR14(2)
<-----------
GT1
--------->
MYB52(1)
--------->
MYB52(1)
----------->
GT1
<---------
ARR11(3)
-------
ARR14(2)
================================
HOX2a_HOX2a
------>
ARR14(2)
=================================
HOX2a_HOX2a
-->
GAMYB
<------
ZmHOX2a(1)
---------->
DOF2
----------->
GT1
--->
ANAC58
<---------
TOE2(3)
--------->
LBD16
<---------
DEAR3(1)
--->
ANAC46
---------->
DOF2
-------->
P
--------->
ARR11(3)
<--
--->
ANAC58
<------
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
ANAC46
---
->
MYB52(1)
==================
HOX2a_HOX2a
----------->
HVH21
<------
ZmHOX2a(2)
<---------
REM1(1)
gaaccgagattaaccgatcagattaaaggatagagaaatcaac
cggtgaaagatcttcgtctgcgatcgaaaaatggtggagaagaagatgaaggaatcg
9674000
----
----
====
<---
----
----
<------
MYB83
----------->
GT1
-----
<------
MYB46(1)
>>>>>>>>>
SARD1
=====
--------->
MYB59
---------->
DOF2
<---------
ANAC55(2)
<--------
-------
ARR14(2)
--------->
ARR11(3)
*
TSS
----------->
GT1
--------->
ICU4
------
------>
ARR14(2)
<---------
TOE2(3)
<---------
YAB1
<-----------
GT1
>>>>>>>>>
CBP60g
------------>
CBF
aatttggtagtaatcggaaatttgagatttcgccaaagttataaatatagtcgaatttttt
cgaatcaagtgaaatttgggtaattaagagccaatgaac
9674100
--------------->
AGL15
<---------
ALFIN1
<---------
YAB1
----------->
GT1
<-----------------
AGL3
----------->
GT1
<-----------------
AG
--------->
DAG2
<---------------
AGL15
--------->
ARR14(2)
---------->
DOF2
<-----------------
AGL3
<---------
ARR14(2)
----------->
AGL15
==============================
MADS_MADS
----->
YAB1
<---------
TOE1(3)
<-----------------
AGL2
=================================================================
MADS_MADS
------------
AGL15
<---------
TOE2(3)
<-----------------
AGL1
--------
----->
TOE2(3)
--------->
AHL20(2)
----------------->
AGL2
--------->
ALFIN1
----->
TOE1(3)
<---------
AHL20(2)
----------------->
AGL3
<---------
bZIP60(2)
------------>
AGL3
<---------
GLK1(2)
============================
MADS_MADS
<---------
O2
--
=====================================================
MADS_MADS
--------->
YAB1
<---------
ANAC46
-
ATHB12
--------->
YAB1
--------->
TOE2(3)
<---------------
AGL15
<---------
ANAC58
->
TEIL
--------->
YAB1
<-----------
GT1
--------->
MYB46(3)
--------->
ARR11(3)
<---------
ANAC58
cataaaaagggaaataaaaatcagaatttttttaacgttgataaaaatggaaccacatttggcatatatgatcatggacactgagtaacgtggatgtgga
9674200
--------->
AHL20(2)
----
<---------
AHL20(2)
<-------
--------->
TOE2(3)
<---------
ICU4
--------->
ALFIN1
<----------
DOF2
<---------
AHL20(1)
<-------
MYC2
<----------
DOF2
--------->
AHL20(1)
------->
MYC2
<-----------
GT1
<---------
AHL20(2)
------->
MYC3
<---------
KAN4(2)
--------->
AHL20(2)
------->
TEIL
<---------
ANAC58
--------->
KAN4(2)
--------->
AHL20(2)
----------->
HVH21
<---------
ANAC46
--------->
KAN4(1)
--------->
YAB1
<---------
YAB1
->
ALFIN1
<-------
MYC3
<---------
ANAC58
<---------
KAN4(1)
----------->
GT1
<-----------
GT1
------->
ALFIN1
<---------
YAB1
---------->
TaMYB80
<---------
TOE2(3)
--------->
AHL20(2)
-------
tgtggatgtgaacgtggtcacaattgtgtgttcatttcggaatattcactttctttaattaagaaatttgaaaattgataatataaaatattactataat
9674300
<---------
AHL20(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
---------->
DOF2
--------->
MYB52(1)
<<<<<<<<<<
MYB80
--------->
O2
<---------
YAB1
<------
MYB83
<---------
ANAC55(2)
----------->
GT1
--------->
MYB59
--------->
ANAC55(2)
----
----->
YAB1
--------->
ATHB12
--------->
DAG2
<---------
O2
<---------
WOX13(1)
--
YAB1
<-----------
RAV1(1)
---------->
DOF2
<---------
REM1(1)
----
-->
YAB1
--------->
AtLEC2
<----------
ID1
<------
MYB46(1)
<-----------------------
TaNAC69(2)
catatgtaaaacatatcaatgcagaattgttggagtaaatgctacaaaaaagtttggtttgaaagtgataacagagacgtagcgggtttgattaatggca
9674400
<--------
--------->
AHL20(2)
<---------
MYB52(1)
<-----------
GT1
<------
ZmHOX2a(1)
------->
GAMYB
<-----
--------->
TOE2(3)
<-----------
RAV1(2)
<---------
AHL20(2)
<------------
AtMYB77
----->
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
At5g28300
-
----->
ANAC58
<---------
ETT(2)
--------->
ARR14(2)
--------->
ANAC58
----------->
HVH21
------
agaaacttaatttttcagtctacaattggatcaggaaactcgaagatgggaatcaaggcattttatgtcaaaaacattctctaaccgtgattttatactg
9674500
======================
HOX2a_HOX2a
------>
ZmHOX2a(2)
=======================
HOX2a_HOX2a
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<-----------
ARR10
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR11(3)
----------->
GT1
------->
TEIL
---
GT1
<---------
ARR11(3)
<---------
ARR11(3)
--------->
CCA1(2)
----
YAB1
------->
GAMYB
--------->
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
<---
--------->
DOF2
--------->
MYB46(3)
--------->
AGP1
<------
ZmHOX2a(1)
<---------
At4g35610
----
--->
ICU4
--------->
MYB52(1)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
ZAT6
<---
attaaagacattccccaacgatctcttaccatgtaataagatctactgatgtaataggatatgaattttgagctagagtgagatgttgtggcaatacatc
9674600
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AGI:
At2g22740.1
Description:
SUVH6 (SU(VAR)3-9 HOMOLOG 6). Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 (SUVH6) [Arabidopsis Thaliana] (GB:Q8VZ17;GB:Q9C5P2;GB:Q9ZQ40); similar to SUVH5 (SU(VAR)3-9 HOMOLOG 5) [Arabidopsis thaliana] (TAIR:AT2G35160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76871.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Pre-SET zinc-binding sub-group; (InterPro:IPR003606); contains InterPro domain SET; (InterPro:IPR
Range:
from: 9671245
to: 9674061
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.