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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                 <---------At4g35610
                                         ------>ZmHOX2a(2)                       <---------ZAT2
                                         ==================HOX2a_HOX2a           --------->ZAT2
                                        --------->At4g35610                      --------->At4g35610
                                        <------ZmHOX2a(2)                        --------->GLK1(1)
                                        <---------At4g35610                      <---------GLK1(1)
                                        ===================HOX2a_HOX2a          ----------->ARR10
                                       <---------AGP1                      <---------MYB46(3)
                                       <---------ARR14(2)                 <---------AtMYB61
                                       <---------ARR11(3)                 --------->ALFIN1
                                     <------NtERF2                       --------->ATERF1(1)       -
                                    ------>NtERF2                        <------NtERF2             -
                                    --------->LBD16                     <---------DEAR3(2)         <
                                   --------->LBD16                      <---------MYB46(3)       ---
                                   <---------LBD16                     <---------DREB2C(2)      ----
                                  <---------LBD16                      <---------DEAR3(1)       ----
                                  --------->ATERF1(1)               <---------DEAR3(1)         <----
     ---------->DOF2              <------NtERF2                  <---------ARR14(2)       ----------
----------->RAV1(1)              <---------RAP2.3(1)    --------->CCA1(2)<-------GAMYB--------->LBD16
---GAMYB                        <---------DEAR3(1)  <------ZmHOX2a(1) <---------ABI4(1) ----------->HVH21
----MYB46(3)               ---------->DOF2         ----------->GT1--------->ARR14(2)<---------LBD16<
--->AtMYB77             ----------->GT1--------->ARR14(2)   <---------ANAC46   <------ZmHOX2a(1)----
 
ttgcgacatagagcgagaatgtctaggttgtaaagtcgccgggatctgagagtaaggagaaatgggtggaatcggcggtggaggagctccggtgaaaggg  9103000
        <---------AtMYB61
     --------->ALFIN1
-------->ANAC58
-------->ANAC58
---------ANAC46
------>MYB52(1)                                                                           --------->ZAT6
------->TGA1                     <xxxxxxxxxxxxxxxxsmallRNA(i)              <---------------AGL15
------->HVH21                  --------->ARR14(2)                          --------------->AGL15
-------HVH21                  <------ZmHOX2a(1)<---------ANAC46            --------->HSFB2a(2)
>DOF2----------->HVH21        ===================================HOX2a_HOX2a     >>>>>>>>>TBF1
---------ANAC55(2)  <---------ARR14(2)   --------->ICU4                  ------->TEIL   <-----------GT1
----->ALFIN1    <---------At4g35610      <---------YAB1   ------>ZmHOX2a(2)<---------HSFB2a(2)
 
tgacggaagtgatggtgagagcggataagagcaggattcaagtgaagattgtgtttagggatcgaagaagacgatgtaccagaagaagaattaactctct  9103100
                                      <---------YAB1
                               ------>MYB83
                             --------->AtMYB61
                             <---------ALFIN1
                          --------->DEAR3(1)
                          <---------ALFIN1
                          --------->AtMYB61
                         --------->MYB46(3)
                       --------->ANAC46
                       --------->AtMYB61
                       <---------ALFIN1                           ---------->DOF2
            <-----------RAV1(1)------>MYB46(1)                --------->YAB1
         <---------ARR14(2)  --------->DEAR3(1)        --------->LBD16               >>>>>>>>>TBF1
         --------->ARR14(2) --------->MYB46(3)     <---------ARR14(2)         <----------DOF2    ---
--------->YAB1        --------->MYB46(3)           --------->GLK1(2)      <---------GLK1(2)      ---
 
gcatcatattggtatctgttgtatcaccaccaccacccattttgattttctgagattccgaacaaaaataaaagtcagaaactttgaagaagaaccaaaa  9103200
                                                  --------->LBD16
                                            <---------GLK1(1)
                                      -------->ATHB1
                                      --------->YAB1
                                      --------->ATHB51
                                      <--------ATHB1
                                      <---------ICU4
                                      --------->ATHB12
                                     <---------ATHB51
                    <---------At4g35610   --------->ATHB12
                 <---------MYB52(1)  <---------YAB1--------------->AGL15
                ------>ZmHOX2a(1)    --------->ICU4<---------------AGL15
     <---------TOE2(3)      --------->GLK1(1)    <---------------AGL15
    ---------->DOF2 --------->At4g35610 <---------WOX13(1)                      ---------->DOF2
------>TOE2(3)  <----------DOF2      <---------ATHB12        ----------->GT1---------->DOF2
------>TOE1(3)------>ZmHOX2a(2)    --------->YAB1--------------->AGL15   --------->YAB1       ------
 
ccctaactaaagtttgatcctttagctggagatttcaacaataattgatttcccccaaatagagaagataaatctattagaaagaaagaaatttgacctg  9103300
                                               <---------ANAC46
                                               ----------->GT1
                                        <---------ATHB12
                                       --------->ANAC58                                 --------->GLK1(2)
          ------->TEIL                 --------->ANAC58                                <---------GLK1(2)
     ----------->GT1                  --------->WOX13(1)                           --------->MYB52(1)
----->HVH21                         <---------At4g35610   ---------->DOF2  ---------->DOF2
 
aaatggggaagtgaatctctctctctctgtgttttcttcagcaatcaatggcgaaaatagcgaaagaaggaaggaactaaaagaaaaaacgattcttttg  9103400
                 <---------ATHB12
               --------->WOX13(1)
             --------->At4g35610
       ---------->DOF2
      --------->AtMYB61                                <---------ANAC55(2)
   <---------WRKY18(1)       --------->ETT(1)<---------ANAC58
  --------->WRKY45         *TSS              <---------ANAC46
  --------->WRKY38(1)--------->MYB46(3)      <---------ANAC58
  --------->WRKY12--------->YAB1 ---------->DOF2     --------->AHL20(2)  <-----------GT1
 --------->DOF5.7(2)<<<<<<<<<<<<<<<<<LFY  <----------DOF2         <---------YAB1 --------->YAB1
 
aaacgttgaccaaagcagcaatcatccactggtcggaaaagactactttcgtctaattacatatagagtatgtttatttctctatcaaattcaacaaatt  9103500
                ------------>CBF
               --------->TOE2(3)
           --------->AHL20(2)
           <---------AHL20(2)                                                  --------->AHL20(2)
          --------->AHL20(2)            ---------->DOF2                   <---------AHL20(2)
       --------->ICU4            ---------->DOF2 <---------TOE2(3)   <---------AHL20(1)
     --------->YAB1  ------------------------>ANAC81    --------->AHL20(2)--------->AHL20(2)    ----
    --------->AHL20(2)     --------->AHL20(2)<----------DOF2        --------->YAB1  --------->YAB1
--------->AHL20(2)   --------->YAB1 <----------ID1 --------->AHL20(2)--------->AHL20(1)     --------
 
tgataaaataaaaattaatctcaataacaaaaaaatgaaagaacaaagctttaatgaaataaactaaacaaaaatattaaaaaaaaatcatattgtctga  9103600
                                                                                                  <-
                                                                                                 <--
                                                                                                 <--
                                                                                                 <--
                                                                                                <---
                       --------->YAB1                                                           <---
                 --------->YAB1 >>>>>>>>>GATA-1                                                 <---
                --------->AHL20(2)                                                 <---------AHL20(2)
       --------->At5g28300    ----------->GT1                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <-------GAMYB--------->YAB1                                  <---------MYB52(1)         <----
  ----------->HVH21<---------YAB1                                  <----------DOF2--------->AHL20(2)
--->TEIL        <---------AHL20(2)                                 ------>ZmHOX2a(1)   <-------TEIL
------->AtSPL8 --------->AHL20(2)                        --------->ICU4   --------->MYB59      -----
 
accctctcacggttacaaatttataatcatatatagataaatctaaaacaacttgaagacatgtttaatcctttagttatgtccataaaattcatggttt  9103700
                                                                                             -------
                                                                                             <------
                                                                                           <--------
                                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                     xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                    <---------WOX13(1)     <--------
                                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
      --------->ATHB12                                            --------->ATHB12         <--------
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
      <---------ICU4                                             <---------YAB1            <--------
     --------->ICU4                                              --------->ICU4            <--------
     <---------YAB1                                            <---------At4g35610         <--------
-------P                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----
-----GAMYB                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
-------ANAC58                                              <-----------RAV1(1)           --------->ALFIN1
-------ANAC58                                             <---------ANAC46        xxxxxxxxxxxxxxxxxx
---MYB83                                                  <---------ANAC58        xxxxxxxxxxxxxxxxxx
---MYB46(1)                                               <---------ANAC58       --------->ALFIN1  <
------MYB46(3)    ----------->HVH21       <---------YAB1xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------LBD16
-----AtMYB61      --------->WRKY12<----------DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-------
---->MYB59 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxx
 
ggttgctcatgattaaactcgttgacattgcattgctctttgaatatgtttgggtccaattgctggtgctgattgaactcataggtgttgagttgcggct  9103800
      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
   ------->MYC3
   <-------MYC3
<---------ALFIN1
-->At4g35610
---At4g35610
-ANAC58        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
-ANAC58        <---------WOX13(1)
-RRTF1(2)     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
-RAP2.6(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
-RAP2.3(2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
-ANAC46<---------AtMYB61                                                     --------->AHL20(2)
----ANAC46xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <------MYB46(1)               <----------DOF2
xxxx>smallRNA(si3)            ------->TEIL   <------MYB83    ----------->HVH21            xxxxxxxxxx
xxxxx>smallRNA(si3)  <---------AtLEC2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->TOE2(3)
xxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->TOE1(2)          --------->At4g35610           <---------GLK1(1)
--RAP2.3(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
xxxxxxxx>smallRNA(si3)  --------->ATHB12   <--------P      ----------->RAV1(2)       <---------MYB52(1)
 
ggaacacgttttggtccgattgatgcatggttgaaccctcgaactggttgggatttttcatcccctgaccagttgctactttaaatcggttgatttcagc  9103900
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AGI:  At2g21230.1   
Description:  bZIP family transcription factor. similar to bZIP protein [Arabidopsis thaliana] (TAIR:AT4G38900.2); similar to bZIP protein [Arabidopsis thaliana] (TAIR:AT4G38900.3); similar to bZIP transcription factor bZIP28 [Glycine max] (GB:ABI34675.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)
Range:  from: 9100705    to: 9103428    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g21235.1   
Description:  bZIP protein-related. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G12900.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49445.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700)
Range:  from: 9103673    to: 9105848    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.