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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
TOE2(3)
<---------
MYB59
--------->
TOE1(3)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
CCA1(2)
<---------
ANAC55(2)
<---------
AHL20(1)
--------->
ARR11(3)
<-----------
GT1
--------->
AHL20(1)
--------->
TOE2(3)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
TOE1(3)
--------->
AHL20(2)
<---------
ATHB12
-
<-----------
GT1
--------->
YAB1
--------->
ANAC58
--------->
ARR11(3)
-
--------->
TOE2(3)
<---------
YAB1
---------->
DOF2
--------->
WOX13(1)
<-
tcaatagcaaaacttaatcaccttagatatataagttttcattatattacctaaaacgcacagagttcaatcaaatattttgacttcaaaatttgtatgt
5443700
----------->
GT1
--------->
YAB1
<---------
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
<------
ZmHOX2a(1)
--------->
AHL20(2)
-------->
YAB1
<---------
GLK1(1)
<---------
AHL20(2)
-------->
AHL20(2)
<-------
TEIL
--------->
GLK1(1)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<----------
--------
YAB1
--------->
CCA1(2)
----------->
GT1
<---------
YAB1
--------->
TOE1(2)
--
tattatattgacaaaaataagattcaaacttatggatttcataaggaaaatcataaaattctaataaatgaggataaaaacatgagacttatttgttgtt
5443800
--------->
AtLEC2
<-----------
GT1
----------->
TBP
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<
--------->
AHL20(2)
--------->
GLK1(1)
<-
<---------
AHL20(2)
------->
GAMYB
--
--------->
AHL20(2)
<---------
AHL20(2)
--------->
MYB52(1)
<-----------
GT1
-
RAV1(1)
---------->
DOF2
--------->
AHL20(2)
--------->
ANAC46
----------->
GT1
<--
---->
ZmHOX2a(1)
--------->
AtLEC2
----------->
TBP
----------->
RAV1(1)
--------->
GLK1(2)
<---
cctaaacaatataaaaagagggtaatgcaaactatatatatatatatccatccaaacaacagaaatcatatttcagtttctgagaggtttttttcaactc
5443900
<-
<-
--
<--
------------>
CBF
<---------
YAB1
<---------
ANAC58
--------->
AHL20(1)
<---------
ANAC58
--------->
ARR11(3)
------------
CBF
<---------
ARR11(3)
--------
ICU4
<-----------
GT1
<---------
AHL20(1)
------->
ATHB12
---------->
ID1
--------->
GLK1(2)
--------->
CCA1(1)
-------
YAB1
<------------
CBF
------------>
CBF
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
-----
-------
DOF2
------------>
CBF
<---------
CCA1(2)
----------->
ARR10
<---------
YAB1
--------->
RVE1(1)
tttattgcttactcaatgtttcaattgtgtttttgttctcatttctcaataaactgatgagaacctcgttgttgtcacgattcaaaacaaaatatctttg
5444000
<------------
CBF
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
ANAC58
--------
ICU4
<---------
AtLEC2
<---------
ANAC58
-------
HAHB4
<-----------
GT1
<---------
ANAC46
------->
YAB1
<-----------
GT1
<---------
AHL20(2)
<---------
ICU4
-------
YAB1
--------->
MYB52(2)
--------->
AHL20(2)
--------->
YAB1
<----
---->
YAB1
<---------
MYB52(1)
<---------
AHL20(2)
--------->
ANAC46
<---------
YAB1
atcattataattgttagtttttccatatttctaaatttttttctgcatgtaagaaaaatgagttatacgtagaaacatgacttgttttttatgatgcaga
5444100
<xxxxxxxxxxxxxxxx
smallRNA(s)
----------->
RAV1(1)
<---------
ETT(2)
--------->
DEAR3(2)
<---------
ALFIN1
========================
HOX2a_HOX2a
<------
ZmHOX2a(2)
--------->
MYB46(3)
------->
TEIL
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
======================
HOX2a_HOX2a
------>
NtERF2
------>
ZmHOX2a(1)
<---------
ETT(1)
--------->
LBD16
<---------
ANAC58
=======================
HOX2a_HOX2a
<---------
ETT(1)
<---------
ANAC58
--------->
TOE2(3)
=======================
HOX2a_HOX2a
<------------
CBF
--------->
TOE1(3)
------>
ZmHOX2a(2)
--------->
HSFB2a(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
--------->
ARR14(2)
<---------
HSFB2a(2)
<xxxx
<-----------
GT1
------------>
CBF
<---------
ARR14(2)
------>
ZmHOX2a(1)
<-----------
HVH21
-----
ARR14(2)
---------->
ID1
--------->
ATHB12
<xxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<xxxxx
tttatactcgattgtttgtcttcttcaatccttaaaa
atgaatggatccgacaatagcactccttcccgaccacggtcgataactcagccttcacttgcc
5444200
--------------------->
WRI1
----------->
ARR10
<------
NtERF2
<---------
ZAT14
------>
NtERF2
--------->
ANAC46
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
ANAC58
<-----------
HVH21
------->
TEIL
<---------
ANAC46
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
YAB1
--------->
REM1(2)
xxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
ETT(2)
<---------
YAB1
<---------
ANAC46
<
xxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<-----------
TGA1
--------->
AHL20(2)
<---------
At4g35610
----
ttctcttccttgcccccattgagtccttctccgtcgtcatcccgtcgcaattcaataccattgatgaacccgtctgcttctgtggagagtagagactctt
5444300
<----------
DOF2
------>
NtERF2
<---------
ANAC58
<---------
ANAC58
--------->
ANAC58
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
ANAC58
<---------
ARR11(3)
--------->
MYB46(3)
--------->
ARR11(3)
--------->
ZAT18
<---------
GLK1(1)
<---------
ZAT18
--------->
GLK1(1)
--------->
REM1(2)
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
ZAT6
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
ANAC46
<----
<---------
TOE2(3)
<---------
ICU4
<---------
ANAC58
--------->
ANAC58
------->
TEIL
<------
ZmHOX2a(1)
<---------
TOE1(3)
--------->
ATHB12
<---------
ZAT14
---------->
DOF2
<-----------
RAV1(2)
---------
MYB52(1)
<---------
YAB1
<---------
ANAC46
<xxxxxxxxxxxxxxxx
smallRNA(s)
--------->
ZAT14
------------->
AGL1
<----------
DOF2
<---------
ANAC58
--------->
ANAC58
<-----------
GT1
<---------
ZAT14
ccattagggttaagaagaaatctttattgcctcctttgtgtgtgaagagaagagcacccaaagacgacattgaacctttcaagagacactacaggagtct
5444400
<---------
MYB46(3)
<---------
ARR14(2)
--------->
ARR14(2)
------>
ZmHOX2a(1)
=================
HOX2a_HOX2a
--------->
ARR14(2)
<---------
ARR14(2)
<---------
MYB46(3)
<----
<---------
TOE2(3)
------>
ZmHOX2a(2)
-----
<-----------
GT1
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
WOX13(1)
--------->
LBD16
<---------
ARR11(3)
-------
<---------
ANAC58
====================================
HOX2a_HOX2a
<-------
--------->
MYB52(2)
------>
ZmHOX2a(1)
================
HOX2a_HOX2a
<-------
<---------
MYB46(3)
===================================
HOX2a_HOX2a
<---------
ANAC58
------
DOF2
<---------
ANAC58
------>
NtERF2
--------->
MYB52(1)
<------
ZmHOX2a(2)
<---------
ANAC58
ttcagtggatagttgtttgagtgacttactaaaactgcctccttctccgaataacgtttcctcttcaagatcggttgatggagaacaaaatgcttccgag
5444500
<------
ZmHOX2a(1)
<---------
TOE2(3)
------>
ZmHOX2a(1)
--------->
TOE2(3)
=============
HOX2a_HOX2a
--------->
ICU4
<---------
MYB59
------>
ZmHOX2a(2)
-----
ZAT2
<---------
YAB1
<---------
MYB111(1)
==============
HOX2a_HOX2a
---->
ZAT2
--------->
YAB1
<---------
TOE2(3)
------>
MYB83
<------
ZmHOX2a(2)
-->
LBD16
--------->
ICU4
<---------
YAB1
<---------
MYB46(2)
<---------
ARR14(2)
--
ANAC58
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
------>
MYB46(1)
<---------
At4g35610
<-
--
ANAC58
>>>>>>>>>>>>>>>>>
LFY
<---------
YAB1
---------->
DOF2
---------->
DOF2
--------->
ARR14(2)
----
cttgagtttgataccagtgtttatactgatgatgaattgaataagatagcaaagagtaccaaacttaaagaggttgcatcggatcctaaggaagtcagaa
5444600
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AGI:
At2g13150.1
Description:
transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G12900.1); similar to bZIP transcription factor bZIP28 [Glycine max] (GB:ABI34675.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700)
Range:
from: 5444138
to: 5445541
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.