Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->TOE2(3)                                                                      ------->GAMYB                                                                      --------->TOE1(3)                                                                    -------->P                                                                    ------>MYB83                                                                  <---------MYB46(2)                                                                  --------->AtMYB61                                                                  <---------MYB111(1)                                                                  <---------MYB59                                                                  --------->MYB46(3)                                                               <-----------GT1                                                             --------->CCA1(2)                                                            <---------ARR11(3)     --------->ANAC46                                       --------->ARR14(2)     --------->ANAC58                                       --------->ARR11(3)     --------->ANAC58                                     --------->ANAC58    <---------LBD16                                  <----------ID1 ------>MYB46(1) --->TOE1(3)                                       ---------->DOF2<---------MYB111(2)<---------YAB1 >DOF2--------->LBD16                  <------ZmHOX2a(1)  --------->ANAC58    <---------TOE2(3)   <--   taaaaacccggaagagtctcatcgccatgggcaatgtgtaaggaaaacgatgaaaaagacaagatataccaaccctaattaagaattgtgagtgaatcaa  29803400                                                                                            <--------                                                                                            <--------                                                                                           ----------                                                                                          <---------AHL20(2)                                                                                      <---------AHL20(2)                                 --------->At4g35610                                 <---------AHL20(2)                          --------->At4g35610                                        <---------ARR11(3)                          <---------At4g35610                                        --------->AHL20(2)                       <------ZmHOX2a(2)        --------->ANAC58                     <---------AHL20(1)                      <---------ARR11(3)        ----------->GT1                      --------->AHL20(1)                      --------->ARR11(3)        --------->ANAC58  --------->TOE2(3)  --------->ARR11(3) -------ATHB12    ---------->DOF2<---------At4g35610          <----------DOF2   --------->AHL20(2)<--   atcaaacacaaactcaaactcaaagatcagctcttagctcaaactcagagacgaaaattgaaaacttttcttaaaccccaaattcaatatatttaaagtt  29803500                                      ----------->RAV1(1)                                   --------->ANAC46                  <---------HSFB2a(1)    --------->AHL20(2)             --------->ANAC58                  <---------AtMYB61    <---------AHL20(2)             --------->ANAC58             --------->ANAC58   --------->AHL20(2)            ---------->DOF2                --------->ANAC58 -TOE1(3)                       --------->YAB1                 --------->SPL7 -TOE2(3)                    --------->WOX13(1)               --------->MYB52(1) >DOF2                     <---------ATHB12   <----------DOF2<---------SPL7                       --- -------YAB1   ---------->DOF2 <---------ATHB12             ------>ZmHOX2a(2)                     ---   atcaatttaaattcaacaaaagaaacccattcaatcaaagcaacatacctttgatatatggatcgaacggaatggtcgcaagagaagagagagagaagag  29803600                                                                                              <------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                        ------>NtERF2                      <---------RAP2.3(2)                                                       --------->ANAC58                    --------->DEAR3(1)                                                       <---------bZIP60(1)                 <---------RAP2.3(3)                                                       --------->ANAC58                    <---------DEAR3(1)                               <---------ANAC58        --------->ANAC46                    <---------RRTF1(3)                               <---------ANAC58     ----------->TGA1                      <---------ABI4(1)                              --------->MYB52(2)    ----------->HVH21                 --------->MYB52(1) ------>ANAC58    <---------At4g35610 ---------->DOF2  --------->bZIP60(1)  *TSS   --------->AtMYB61< ------>ANAC58  <-----------GT1<---------ANAC46  --------->GLK1(2)      ------------------------>ANAC81   acccaagtgaagaatttttaagctctcaaggtttcttgcacaaagggtgagagtctgacgccagaaaacgagagaaacaaaaaaaccaaaacggcggcgt  29803700                                               --------->ARR11(3) ---ANAC46                --------->YAB1   <---------AHL20(2) -DEAR4(2)                <---------ANAC55(2)  <---------ARR11(3) -RAP2.3(1)               --------->ANAC55(2) <---------CCA1(2)            <---------AHL20(2) -ERF1  ------------>AtMYB77            <---------AHL20(1)                 --------->AHL20(2) -RRTF1(1)          ------->TEIL        --------->AHL20(2)                <---------AHL20(2) -ORA47(2)          <---------ARR11(3)  --------->AHL20(1)        <---------ALFIN1          <-------- -ATERF1(1)        <---------CCA1(2)    <---------ARR11(3)     <-----------GT1 <-----------GT1  <---- -----------GT1<---------At5g28300 ------------>CBF <----------DOF2    --------->AHL20(2)   ---------   tttaacaacttcacagttactgtatcttacataatagtccaatattttatatctcttttcagtttgaaccacattatttatttactacccctagtcccct  29803800                           <XXXXXXXXXXXXXXXXXXXXMIR166A-G                   <---------ALFIN1                                                               <--                  ----------->HVH21                                                               <--               ------>NtERF2                                                                      <--              --------->ANAC46             --------->ARR14(2)          ------>ZmHOX2a(1)         <--- -ZAT18       --------->ANAC58             <---------ARR14(2)       ------>NtERF2              <----- -----ALFIN1  --------->ANAC58         xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ----------->HVH21<---- >ZAT18     <---------ALFIN1*TSS ----------->RAV1(2)               --------->DEAR3(1)       ------>ZmHOX2a(1)   actctctctcgcttccacgcccgactcggactcaaacctggtccgaattggctgtgtctctctccatcgcctccttcttctctgacaaactctcctccgt  29803900                                           <---------ZAT6                                       <---------ZAT14                                       --------->ZAT14   <------NtERF2                       --------->ZAT18 --------->ETT(1)                   <---------ANAC58 <---------DEAR3(1)                 <---------ANAC46 ----MYB83                         <-------TEIL ----MYB46(1)                   <---------HSFC1(2)                                              ----- -------MYB46(3)                --------->HSFC1(2)                                              <---- ------AtMYB61                 --------->ANAC58                                                ------ --GAMYB                       --------->ANAC58                         <---------LBD16      -------- -----MYB52(1)     <---------TOE1(2)<---------ANAC58         <-----------GT1                 <-------   tggtcggagtttgtttcttcgctcgttcatcacaagcttcgtgtactggtaattgttccattttttctagctatttcggaaaattggatggaagaagcat  29804000       <---------ANAC46     <---------ANAC55(2)       <-------GAMYB ---->At4g35610               <---------MYB46(3)                                 <-----------GT1 -----At4g35610               <---------ANAC46                             <---------MYB52(1) --->GLK1(2)               <-----------RAV1(1)                            <----------DOF2 ->HSFC1(2)        <---------At4g35610  <------NtERF2            <---------ARR14(2)      ----------->GT1 --HSFC1(2)    <-----------RAV1(1) <---------TOE2(3)             --------->ARR14(2)    <---------MYB52(1)   ctgaaatacgcgtgtaaatgtcgctgattgtgtcgttgaggcagagccattgttgattcttagagaaaatttgctcctttatttctccagtttgttaaac  29804100                                      <---------HSFC1(2)                                           <-                                      --------->HSFC1(2)                                       <-----                                      --------->HSFB2a(1)                              ---------->DOF2                            --------->LBD16               <---------YAB1          <-----------HVH21--                           <---------LBD16            --------->YAB1             <------MYB83 <------MYB83                  <-------TEIL        <---------HSFB2a(1)<---------GLK1(2)   <---------ZAT2   <------      --------->ANAC58    <---------LBD16     <---------At4g35610            --------->ZAT2   <------MYB46(1)      --------->ANAC58 ----------->HVH21      --------->At4g35610 <-----------GT1<------MYB46(1) <---   tctcgattacgcccttgaaatgcattcgaccgggaagagaaatttcttagctgttatcagattattgtttactagttcgagcttggtcagaaaggctggt  29804200                                                                                    =================                                                                                    ------>ZmHOX2a(2)                                 --------->ALFIN1                            --------->GLK1(2)   <---------GLK1(1)     --------->MYB46(3)                                 --------->ARR14(2) --------HSFB2a(2)   <----------DOF2                                        <---------ARR14(2) --GAMYB   --------->ARR14(2)<-----------RAV1(2)        --------->GLK1(2)   <---------GLK1(2)  <----- ------->HSFB2a(2)  --------->TOE2(3)                   ------->TEIL       ================HOX2a_HOX2a ---MYB46(3)   <---------At4g35610           <---------YAB1                <------ZmHOX2a(1)<-------- ------REM1(1) --------->At4g35610        <---------MYB52(1)             <---------TOE2(3)  ---------   tgtagaaatctcatttctgctacctttaccaccaggtgttcgacgttatgcctgaatgaatctgaagaatgcattgaggattctgatctatcgtctagga  29804300  Previous    Next  AGI:  At1g79210.1    Description:  20S proteasome alpha subunit B, putative. Identical to Proteasome subunit alpha type-2-B (PAB2) [Arabidopsis Thaliana] (GB:Q8L4A7;GB:O64532); similar to PAB1 (PROTEASOME SUBUNIT PAB1), peptidase [Arabidopsis thaliana] (TAIR:AT1G16470.2); similar to PAB1 (PROTEASOME SUBUNIT PAB1), peptidase [Arabidopsis thaliana] (TAIR:AT1G16470.1); similar to unknown [Populus trichocarpa] (GB:ABK93363.1); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 29800974    to: 29803676    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79220.1    Description:  mitochondrial transcription termination factor family protein / mTERF family protein. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT5G64950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47894.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 29803828    to: 29805418    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.