Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                             --------                                                                                             --------                                                                                    <---------ZAT14                                <---------ANAC58                                    --------->ZAT18                                <---------ANAC46                                    --------->ZAT14              ------->GAMYB--------->KAN4(2)                               --------->At4g35610  <----             <---------ALFIN1   <---------ANAC58                           <---------At4g35610<------     <---------ARR14(2)  =========================HOX2a_HOX2a       <---------ARR14(2)       <-------     --------->ARR14(2)  <------ZmHOX2a(2)                          --------->ARR14(2)       <------- ----->ZmHOX2a(1)        <---------YAB1    <------ZmHOX2a(1) <---------GLK1(1)     >>>>>>>>>>>>>>>>>LFY   tcctccaaatccctaacaccctctacgatcattcgcgtgtatttaggacaatttgaagaaatgaaatctgaatcggcctctgagagtccagtgtctcgtc  29685300                                                                          ===========================                                                                          <----------DOF2          --                                                                     <---------ANAC58           -----                                                                     <---------ANAC58           <----                                                                 --------->GLK1(1)              <----                                                                 <---------HSFB2a(1)            <----       --------->ANAC46                                          <---------GLK1(1)              <----  --------->GLK1(1)                                              --------->HSFB2a(1)           <----- ----NtERF2                                                     --------->ARR14(2)           -------- ->TGA1a                                                        <-----------ARR10      <---------ARR14(2) ->O2  --------->ANAC58                                         <---------ARR14(2)     --------->ARR14(2) -----DEAR3(1)                --------->ATHB12                  ------->TEIL----------->HVH21-------- -----HVH21          <---------ZAT18                            <---------ARR11(1)    <------NtERF2<- --O2  --------->ANAC58      ------>ZmHOX2a(1)                 <---------GLK1(2)     --------->LBD16- --TGA1a        <---------GLK1(1)                              <---------CCA1(2)    <---------ANAC46<   ggagaaacccagcaattgaattctgcgcttcctgatttgtctgcgaagaattagagctaaaattcgaatctccgtgctgtaacgaggcggaaacagtgac  29685400       <---------TOE2(3)              <------ZmHOX2a(1) =====bZIP_DOF               --------->ANAC46 ------->RAP2.6(2)           <---------ANAC58 ---->O2                     --------->ANAC58 -----bZIP60(2)              <---------ANAC58 -----O2--------->YAB1    <---------ARR14(2) -----ANAC46              --------->ARR14(2) -----TGA1a     ----------->GT1----------->HVH21 ------------------TaNAC69(2)<---------ANAC55(2)                <---------TOE2(3) --->TGA1    --------->At4g35610  <---------ANAC46             ---------->DOF2        <------ZmHOX2a(1) --->HVH21   --------->ZAT2  --------->ANAC55(2)      --------->ZAT2           ---------->DOF2 <----- --------ATERF1(1)     <---------TOE2(3)              <---------At4g35610 <---------ARR11(3)   <----- ----->NtERF2<---------At4g35610  <---------O2        --------->At4g35610<------ZmHOX2a(1)--------->GLK1(1) ------NtERF2<---------ZAT2  --------->ANAC58         <---------ZAT2<-----------GT1  ----------->GT1   gcggccactatggtaagctggaaacaaggttacgcgacgaggagagaagaagagagagctggaactaaagttacaggattttaaaggaggagaaatcaag  29685500                                                                                       <---------ALFIN1                                                                                 --------->At4g35610 <---------TOE1(3)          ---------->DOF2                                      <---------At4g35610 <---------TOE2(3)     <---------TOE2(2)                                       <---------ANAC58 ----TOE1(3)           ------->TEIL                            ---------->DOF2 <---------ANAC58 ----TOE2(3)      <------ZmHOX2a(1)                        <----------ID1  <----------DOF2        <--   gttagggtttcgaaattgcaggacgtatgtaaaagctccataaacaaacacgatggagaagaagacaaaggtcgctactttgcttctgcccacatcaaga  29685600                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                             <-------                                                                         <---------AHL20(2)  <-------                                                                         --------->AHL20(2) <-------GAMYB            <---------MYB46(3)                                       --------->AHL20(2)     <--------            <-----------RAV1(1)                                      <---------AHL20(2)     <--------         --------->GLK1(2)                                           --------->AHL20(1)   --------->LBD16     >>>>>>>>>TBF1                                 <---------YAB1   --------->AHL20(2)   <---------LBD16  >>>>>>>>>TBF1     ----------->GT1               *TSS            ------>MYB46(1)     --------->ARR14(2) ----ZmHOX2a(1)  <---------AtLEC2          <-----------GT1        ------>MYB83        <---------ARR14(2)   ggaagaagaagaagctgttgcagggtttatctgtagctatgggtttaaccattttgattttcaaaaccaaattaattaataaaaccaaaatcccggttgg  29685700 ------>WRKY18(1) --------HVH21 --MYB46(1) --MYB83 -----ANAC46 -MYB46(1) --->MYB59 ----MYB46(3)                                              <---------ICU4<---------WOX13(1) -MYB83                    --------->AHL20(2)              <---------AHL20(2)                    >>>> -P   <-----------HVH21    <---------AHL20(2)             --------->AHL20(2)     ------------>MYB.PH3(1) --MYB52(1)              <-----------TBP                --------->YAB1 --------->ATHB12         ----- -MYB52(1)     <------------CBF                      <----------DOF2  --------->ICU4          <------ ---HVH21     --------->ATHB12                   <---------GLK1(2)    <---------YAB1  <---------MYB52(1)   gtcaaaccggtctgagccattgggcctatttatatgggctcttacattatcgattctttaataaatacagtattgattgttcaaaaccgttatgggccta  29685800             <---------MYB59            --------->ANAC55(2)        <-------GAMYB        --------->At5g28300       <---------MYB46(3)       ----------->GT1       <---------DEAR3(2)      <---------DEAR3(1)    ------------>MYB.PH3(1)    ------------>AtMYB77   --------->DAG2  ---------->DOF2  --------->DAG2      --------->AHL20(2) ---------->DOF2     <---------YAB1    ------>MYB83                 ---------->DOF2 >>>>>MYB98 <---------ANAC55(2)        ------>MYB46(1)            --------->At4g35610 ---->MYB52(1) --------->MYB52(1)    <---------MYB59            --------->YAB1                 <----- ---MYB59<---------ARR14(2)<-----------GT1   ------>ZmHOX2a(1) <---------ATHB12      <----------DOF2   acaaaaaggcggttacataactgattatttaacagaataccaaattcctctaatgctatacactaatcagcaaagaaacttgctctgcttttgtttataa  29685900                                                                            --------->LBD16                                                                           --------->HSFB2a(2)                                                                        <---------ARR14(2)                                                                        --------->GLK1(2)                                                                <---------ZAT2<---------ARR14(2)                                                                --------->ZAT2--------->ARR14(2)                                                                <---------At4g35610                                                             <---------At4g35610                                                         --------->GLK1(2) <---------HSFB2a(2)                                                         --------->ARR14(2)<---------ANAC55(2)                                                         <---------ARR14(2)--------->ANAC55(2)            <---------ZAT6                              <---------GLK1(2) <---------LBD16          <---------ANAC46                       <------ZmHOX2a(1)      --------->ARR14(2)     <-----          <---------ANAC58  <---------ANAC58    <---------YAB1  --------->At4g35610        <---------ANAC58 ------>ZmHOX2a(1) <---------ZAT18   <---------CCA1(2)<---------TOE2(3)<---------ARR14(2)  <---------ANAC58 ------GT1<---------ANAC58  <---------ANAC58 --------->TOE1(2)  ----------->RAV1(2)   <---------O2   ctcctgcaaattgagtgttagagcacatttgcttccctcatatcaaaactaggattgagattctgcagctggagattccggaatcgagacttggctagtg  29686000                    ------>ZmHOX2a(1)                                                    <----------DOF2                  <---------ANAC58                                                  --------->ARR11(3)                  <---------ANAC58                                            --------->ANAC58               <---------GLK1(1)                                              --------->ANAC46    <--               --------->GLK1(1)                               --------->MYB52(1)   <---------ARR11(3)          --------->TOE2(3)                            <---------CCA1(2)      --------->ANAC58-------          <---------ANAC58                            ------>MYB46(1)       <-----------RAV1(2)------      <----------DOF2                                <---------CCA1(2)   <---------At4g35610 -------- ----ZAT6 <---------ANAC58             --------->ZAT14------>MYB83       --------->At4g35610 <-------   tttggagactttccttgatttcctgcataaaacacactctctaaactctcttcacctatctctcttaaccgattgagctcaggcaatatctctttcccga  29686100                                                                                                   <-                                                                                                   <-                                 ---------->DOF2                                                 ----                           --------->ANAC46                                                    ------                          --------->LBD16                                                   =========      <---------CCA1(2)   <---------LBD16                                             --------->At4g35610 --------->MYB59         <---------ANAC58                                         <---------ARR14(2)< ---------HVH21          <---------ANAC58                                         --------->ARR14(2)- -->LBD16               <---------LBD16---------->DOF2                           <---------MYB52(1)-- --->LBD16<----------DOF2<---------ANAC46                                       --------->LBD16------ ->HSFB2a(2)          --------->ARR14(2)          ---------->DOF2      --------->ANAC46     <------ZmHOX2a(2) --HSFB2a(2)          <---------ARR14(2)    <----------DOF2    <-----------------AGL1 <---------At4g35610   ggtcaggtctatcttttcttcttagttccgcgcattgaagcgaaagctttgctaaagatagagcttcttctataggccagtccggtactgctggatcaag  29686200  Previous    Next  AGI:  At1g78930.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to EMB2219 (EMBRYO DEFECTIVE 2219) [Arabidopsis thaliana] (TAIR:AT2G21710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41706.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 29682990    to: 29685650    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78940.1    Description:  protein kinase family protein. similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G16760.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G20200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41708.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43975.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kina Range:  from: 29685750    to: 29688855    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.