Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------>ZmHOX2a(2)     <---------RVE1(2)                                                         <---------DOF5.7(1)     --------->ARR11(3)                                                       <---------DOF5.7(1)     <---------ARR11(3)                                                  <----------DOF2     <---------GATA12                                                   <---------DOF5.7(1) ---------ANAC46                                                      <-----------GT1 ----bZIP60(2)               <<<<<<<<<TBF1                           <---------CCA1(2) >DEAR3(1)            <-----------GT1                            <---------ANAC46 -->HVH21          ----------->GT1       ------>ZmHOX2a(1)      ---------->ID1<----------DOF2   ttgccttgatcttagaacacagtgtaacttcttcttcccattcctcatcttcatcaacttctacttgtcgtttatctttccttttactactaacatcaga  23042600                         <---------At4g35610                         <---------ANAC55(2)                         --------->ANAC55(2)                    <---------ICU4                    --------->YAB1                    --------->YAB5                                                                ---                   <---------ATHB12       --------->YAB1                                          ---                   --------->ICU4         --------->TOE1(3)                  <----------DOF2---------                   <---------YAB5         --------->TOE2(3)                  ------>ZmHOX2a(1)   ----               <---------ZAT18      --------->TOE2(3)                   --------->WOX13(1)  ------>ZmHOX2a(1)       --------->ANAC55(2) ----------->HVH21                          <---------YAB1        <--------      -------->P --------->WOX13(1) --------->YAB1                   --------->RVE1(2)      ---------    <---------MYB111(2)  ----------->RAV1(2)                    <---------ANAC46      --------->KAN1    <---------MYB111(1)  --------->At4g35610                 <---------MYB52(1)     <---------TOE1(2)   aaaccacttacctattgtgcaatcatcacctgactctatcttaaccataacttcaacttcttcgttgcgcttatcaatccttttcgcagtattcctctga  23042700                                                              <---------TOE1(2)                                --------->AHL25(2) <---------ARR11(3)                                --------->AHL20(3) --------->ARR11(3)      <---------ANAC55(2)      --------->YAB1      <---------ARR11(1)      --------->ANAC55(2)   --------->YAB1         <---------ARR11(2)                     <---------YAB5   <---------ATHB12  <---------YAB5                <-----------ARR10                <---------At4g35610 --------->WOX13(1)--------->YAB1                  <---------ARR14(2)               --------->At4g35610 ------>ANAC58     --------->YAB5                  --------->ARR14(2)             --------->MYB46(3) ------>ANAC58     <---------ICU4--------->KAN1    --------->RVE1(2)             <---------At5g28300 >At4g35610       --------->ICU4<---------AHL25(2)<---------GLK1(1)        <---------ANAC58 --->TEIL         <---------ATHB12              <---------AtLEC2           <---------ANAC46--------->YAB1 -At4g35610       <---------YAB5<---------AHL20(3)<---------CCA1(2)        <---------ANAC58<---------ICU4 -->RAV1(2)     --------->WOX13(1)          <----------DOF2  ------>ZmHOX2a(1)  <-----------GT1   acccaatcacttaatatgcaatcatcatcttcataatattcttctactttgcatatctttctccttcgtttcgcattccgtttaaccgctgaatcatcgc  23042800                       --------->ARR14(2)                       <---------ARR11(2)                       --------->ARR11(2)                      <---------MYB52(1)                    <---------ANAC58               <---------HSFB2a(1)               --------->HSFB2a(1)               --------->HSFC1(2)               <---------HSFC1(2)            ---------->DOF2         --------->HSFB2a(2)                                          <---------YAB5         <---------HSFB2a(2)     --------->ZAT6                    --------->ATHB12     <---------At4g35610         --------->YAB5          <---------DOF5.7(1)                    <----     --------->ZAT2 <---------ANAC58                     <---------DAG2                      ------>ZmHOX2a(1)     --------->At4g35610   ------>ZmHOX2a(1)          <<<<<<<ZML2 <---------YAB1--------->GLK1(1)   tatcttcagctctcgaaagcttccgtttcctactatcactactactactagggctagaaccttttgacatgaatggtttcagagttctcttcttcctagt  23042900                                                         --------->GLK1(2)                                                         --------->RVE1(2)                                                         --------->ARR14(2)                    <---------WOX13(2)                   <---------ARR14(2)                  <---------YAB1                        <---------GLK1(2)                 <---------ARR11(3)             <-----------GT1                 --------->ARR11(3)           --------->AHL20(2)          ------>ZmHOX2a(1)       <---------KAN1                       --------->WOX13(2)          ----------->RAV1(2)   --------->ANAC46--------->ATHB12         <---------WOX13(2)   <----------DOF2   ---------->DOF2 -----YAB5 --------->YAB1          --------->KAN1     --------->LBD16<---------At4g35610         ----   cgtccacgaatattgataagataattggaaacaattcatatgctccaatttaactccagaatccattctttagctcctgcaaacaaaaatcgccagtgat  23043000                    --------->ARR14(2)                    <---------ARR14(2)         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       <---------ARR11(2)       --------->ARR11(2)       --------->ARR14(2)                                          >>>>>>>>>RAP2.2       --------->ARR11(3)                                        <---------ARR11(3)       <---------ARR14(2)                                <---------ARR14(2)       <---------ARR11(3)                                --------->ARR14(2)       --------->RVE1(2)                                 --------->GATA12       <---------GATA12                                  <---------GATA12       --------->GATA12                                  <---------RVE1(2)       --------->AGP1        --------->ANAC46            <---------ARR11(2)       <---------AGP1--------->GLK1(2)              --------->AtLEC2                         --------      <---------CCA1(2)    --------->REM1(1)     ------->TEIL    --------->RVE1(2)          <-------- <---------WOX13(2) <---------GLK1(2)       --------->MYB52(1)   --------->ARR11(3)         --------- ------->GT1       --------->KAN1 <------------CBF<---------KAN1<---------KAN1      --------->KAN1  <   ggtaattcagatctatgaaacagattcttacaccaaaattgaaacaaaacgaacatgcagatttgaatatctaaaacagagacaacaaattcgagttctt  23043100             --------->AHL20(2)             <---------AHL20(2)             --------->AHL25(1)             <---------AHL25(1)             <---------AHL12(1)             --------->AHL12(1)             <---------AHL25(3)            <---------AHL12(2)            <---------AHL25(1)            --------->AHL20(2)            --------->AHL12(3)            --------->AHL25(2)            --------->AHL25(3)           <---------WOX13(2)     --------->RVE1(2)                                                                  ---------->DOF2    <---------ICU4                                                              --------->RVE1(2)   <---------YAB1                                   --------->YAB1             ------>MYB83      ----   --------->ICU4                                  <---------ATHB12   <---------YAB1  --------->YAB1 --------->YAB5        --------->AHL20(2)      ------------>CBF   --------->TOE2(3)  <---------ATHB12 --------->YAB1   ------------>CBF       <---------ATHB12      ----------->RAV1(1) --------->WOX13(1) ->KAN1--------->YAB1  ---------->DOF2 --------->WOX13(1)   ------>MYB46(1)    ------>MYB46(1)------- -ARR11(3) --------->WOX13(2)        ------------>CBF       ------>MYB83<---------AHL20(2)--------->DOF5.7(1) >ARR11(3) --------->AHL12(2)  --------->ARR14(2) --------->RVE1(2)--------->ICU4------------>CBF<--- ------ZmHOX2a(2)--------->YAB1<---------ARR14(2)--------->WOX13(1)<---------YAB1<---------ATHB12<---   cgatcataatcaaaattaatcgcaataaaacagtatatgatcaatcgattccaatcaaaaccaaacaacattattaaaaccaaatcaatcaaaagagaca  23043200         <------------CBF   <------ZmHOX2a(2)     <---------------AGL15 --------->GATA12        --------->YAB1     <---------HSFB2a(2)   --------->ARR11(3)      --------->YAB5     =========================================================MADS_MADS     --------->HSFB2a(2)   <---------GATA12       <---------YAB1    <-----------------AGL1 --------->RVE1(2)  --------------->AGL15                    <---------GLK1(1)    ----------------->AGL2 <---------ARR11(3) <---------DAG2                          <---------ARR11(3) ----->WOX13(2)     --------->At4g35610       <---------------AGL15                   --------->ARR11(3) ----->CBF        --------->YAB1              --------->TOE2(3)              --------->ANAC58    ---- ---------CBF  --------->GLK1(1)           <-----------GT1                   --------->ANAC58   ----- ------WOX13(2)<---------GLK1(1)    ------------>CBF              ----------->GT1    <---------KAN1 -   attgagtctagaattggaaatcagaagaagatcgaaaactcaattttaccttatgatgaacacaaacacagaaaaaaacaagctcgaagaactctgcaac  23043300                                         <---------ZAT2        ------>ZmHOX2a(1)          --------->GATA12                                         <--------      ----------->RAV1(2)          <---------GATA12   ---------->DOF2       <---------ARR14(2)  <---------GATA12                --------->KAN1  --------->At4g35610       <---------GLK1(2)  ------->TEIL             <-----------GT1        <---------At4g35610       --------->ARR14(2)     <- ----->YAB5         --------->GATA12     --------->ZAT2                     --------->ARR11(2)    <-- ---->ICU4          <---------GATA12     --------->At4g35610                <---------RVE1(2)<------- -------->YAB5      --------->RVE1(2)    <---------At4g35610                --------->GATA12<--------   gatgaatctcctgtgaaaaacaaatctataaaccctagattccagctaagttagatgaaagagattgaacaaactttggattctctcaaacttagctttc  23043400                                                                --------->MYB59                                                         --------->HSFB2a(2)                                                         --------------->AGL15                                                         <---------------AGL15                                                         <---------HSFB2a(2)                          ---------->DOF2               ----------------->AGL2  <---------ANAC58                          --------->DOF5.7(1)        <---------ARR11(3)         <---------ANAC58                     <----------ID1                  --------->ARR11(3)       --------->ARR11(3) <---                    ----------->GT1                  --------->RVE1(2)----------->GT1          ------       --------->YAB1----------->GT1                --------->RVE1(1)--------->DOF5.7(1) ----------->GT1 --------->AHL25(3) <---------TOE2(3)               <---------KAN1  ---------->DOF2     <---------ANAC55(2) -ANAC58     --------------->AGL15         <---------LBD16--------->LBD16   --------->AHL12(2) ------ --------DOF5.7(1)---------->DOF2       --------->KAN1  <---------LBD16----------->GT1  --------->ANAC46 --------DOF2<---------------AGL15  ----------->GT1 --------->KAN1<------ZmHOX2a(1)     --------->ANAC58 ---DOF2     ============================================================MADS_MADS      --------->ANAC58 -ANAC58  --------->MYB52(1)--------->DOF5.7(1)     --------->CCA1(1)--------->DAG2    <---------LBD16   ctttttatttcataactgaataaaggaaaaaagagaaatagtttattcggagaaatatcccagaattaggaaaaggaaaatttcttgagcacggaaaaaa  23043500  Previous    Next  AGI:  At1g62310.1    Description:  transcription factor jumonji (jmjC) domain-containing protein. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G11950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44407.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69660.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60121.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23039704    to: 23042966    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.