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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR14(2)
<---------
ARR14(2)
------->
GAMYB
<---------
ATHB12
-------->
P
---------->
DOF2
------>
MYB83
--------->
LBD16
------>
MYB46(1)
<---
<---------
ARR14(2)
------->
GAMYB
<---
--------->
ARR14(2)
--------->
WOX13(1)
--------->
MYB46(3)
-------
--------->
GLK1(2)
--------->
TOE2(3)
--------->
MYB46(3)
<---------
WOX13(1)
<---------
At4g35610
---------->
DOF2
<-----------
GT1
<---------
ALFIN1
ttttcagataagaatccgaaagttcagactcagaacgcgaactcaaagcgctaacatcaatctcgttgttaaccaaccaagtatccacactgactgattt
4037900
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
REM1(1)
<-----------
RAV1(1)
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
<---------
ZAT2
<---------
ICU4
----------->
RAV1(2)
--------->
ZAT2
--------->
YAB1
========================
RAV
<----------
DOF2
<----------
DOF2
------
ANAC58
--------->
ARR11(3)
--------->
GLK1(1)
--------->
MYB46(3)
------
ANAC58
<---------
ARR11(3)
<---------
CCA1(2)
--------->
MYB46(3)
-->
GLK1(1)
--------->
HSFB2a(2)
<---------
MYB46(3)
--------->
YAB1
<<<<<<<<<
TBF1
cttgctcctgcttcgagatgttgccttgctggaaggaactagttggagttgttgttcgcatttcttttcatcatcaacaacaacttcttcttctttccat
4038000
<---------
ANAC58
<---------
ANAC58
<---------
At4g35610
<---------
ARR11(3)
--------->
GLK1(1)
<---------
ANAC58
<---------
At4g35610
--------->
YAB1
<---------
ANAC58
<---------
GLK1(1)
--------->
ZAT14
<---------
ICU4
<----------
DOF2
<-----------
GT1
<---------
YAB1
--------->
YAB1
------>
ZmHOX2a(1)
<----------
DOF2
------>
ZmHOX2a(1)
<---------
REM1(2)
--------->
GLK1(1)
--------->
ARR11(3)
gtagttgctctctttttaacagagctcctctgcttcttctcattctcttcacacttgttctcatcatcacatttcctctttcttgaagatttcgttttaa
4038100
<---------
ANAC58
<---------
ANAC58
--------->
ANAC46
<---------
ARR14(2)
--------->
KAN4(2)
--------
--------->
ARR14(2)
--------->
HSFB2a(1)
<---------
ALFIN1
<---------
MYB52(1)
<---------
HSFB2a(1)
--------->
MYB46(3)
<----------
DOF2
<---------
ALFIN1
--------->
ZAT6
------->
TEIL
--------->
At4g35610
--------->
ATHB12
<------
ZmHOX2a(1)
<---------
At4g35610
<---------
At4g35610
<----------
DOF2
--------------------->
WRI1
--------->
At4g35610
tctcatcagctttagaccgtttccgtctttgattagccactcgcttaggacattccacactaatctcttcttctatgtctgatgaaccactgctaagact
4038200
------>
ZmHOX2a(1)
<----------
DOF2
--------->
TOE2(3)
--------->
ARR11(3)
--
<<<<<<<<<
TBF1
<---------
ARR11(3)
<---------
ANAC58
--------->
MYB52(2)
--------->
TOE2(3)
--------->
CCA1(1)
<---------
ANAC58
<---------
MYB52(1)
----------------->
AGL1
--------->
RVE1(1)
<---------
YAB1
<-------
GAMYB
---
->
ZAT6
<---------
MYB52(1)
---------->
DOF2
--------->
ANAC46
--------->
GLK1(2)
<-----
cgttgcctcaaccggtttcttcttctctggccaacaagtttctaaagaaatatcctttacaccattatgcttgagaatcactccgttagtagcaacttca
4038300
------------>
CBF
<----------
DOF2
------>
MYB46(1)
<---------
ATHB12
------>
MYB83
<------------
CBF
--------->
At4g35610
<-----------
TGA1
--------->
AHL20(2)
------------>
CBF
<-----------
HVH21
<---------
AHL20(2)
<-----------
GT1
<---------
ARR14(2)
--------->
AHL20(2)
------->
ANAC46
<---------
At4g35610
--------->
ARR14(2)
<---------
AHL20(2)
------>
MYB46(3)
----------->
RAV1(2)
------>
MYB46(1)
<---------
AHL20(1)
------
GT1
<-----------
GT1
------>
MYB83
------------>
CBF
------------>
CBF
ccctccat
tttctcaatttcacctgccaattccataaccaaatcgtcagaaaattcaaattcagactcaatttaattggactccaatctttttctaatat
4038400
<-------
GAMYB
<---------
MYB46(3)
--------->
MYB111(2)
--------->
MYB55(2)
<--------
P
<----------
ID1
<---------
ANAC58
<----------
DOF2
---------->
DOF2
<---------
YAB1
------------>
CBF
--------->
TOE1(3)
------>
MYB83
---
<---------
TOE2(3)
<---------
ANAC58
--------->
TOE2(3)
------>
MYB46(1)
caaactatggtttcacagattacgaatgggttgttgaatcaaacaatacagaggttttaaaactttaacatcacagagacaaaaccaaacaaagagatta
4038500
<-----------
HVH21
--------->
LBD16
--------->
ANAC55(1)
--------->
ANAC58
--------->
ANAC55(2)
--------->
ANAC46
<---------
ANAC55(2)
----------->
RAV1(1)
--------->
ANAC58
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
--------->
MYB52(1)
<
<---------
ARR11(3)
--------->
AHL20(2)
-------
------>
ZAT6
---------->
DOF2
----------->
GT1
XXXXXXXXXXXXXXXXXXXX>
MIR420
<------
acacgagtcaagaacagaataaaagtagaacaagaactgagaaaatgaaacgacagaaactaaaaaaatcacggaaatatgtcagagagagtagcatcat
4038600
-
<-
<-----------
HVH21
<-----
<---------
YAB1
------->
GAMYB
<-----
<----------
DOF2
------>
ZmHOX2a(1)
--------->
LBD16
<--------
---------
DAG2
--------->
LBD16
<---------
LBD16
<---------
At4g35610
-->
YAB1
<---------
ATHB12
<---------
ARR11(3)
--------->
GLK1(2)
<---------
GLK1(1)
---
ICU4
--------->
At4g35610
--------->
ARR11(3)
<---------
GLK1(2)
--------->
ALFIN1
<---------
MYB46(3)
cacctttctgattagctcaaatcaaacaaacacagaagagttcttcctggacaaccctagattccggtgagagacagtgaggcgatggatagctgttgag
4038700
---------->
RAV1(1)
<-----------
RAV1(1)
--------
ETT(1)
<---------
AHL20(2)
--------->
CCA1(2)
<--
----
ANAC58
--------->
AHL20(2)
--------->
ARR11(1)
--------->
AHL20(2)
----
ANAC58
--------->
AHL20(2)
--------->
ARR11(3)
--------->
GLK1(2)
-----
-
MYB52(1)
---------->
DOF2
--------->
TOE1(2)
<---------
ARR11(3)
<----------
DOF2
<---------
AHL20(2)
tccgacatgaaacaaagaagaaatttaaaaaaacatgagattgtgaagaaagatatgtccgaaatgttgttctttaagagtttctgagagatttaaaaaa
4038800
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AGI:
At1g11950.1
Description:
transcription factor. similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G62310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44407.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347)
Range:
from: 4034585
to: 4038308
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.