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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
At4g35610
<---------
At4g35610
<-------
MYC2
--------->
ALFIN1
------->
MYC2
------->
MYC4
------->
MYC4
<-------
PIF5
----------->
GT1
------->
MYC2
<---------
ZAT2
<-------
MYC4
<-------
MYC2
--------->
At4g35610
<-------
MYC3
------>
ZmHOX2a(2)
-------->
ABF1
-------->
ABF1
--------->
GLK1(1)
------->
MYC3
------->
MYC3
<------
ZmHOX2a(2)
<-------
MYC3
------->
PIF5
--------->
ARR14(2)
<---------
TGA1a
<---------
ALFIN1
<-------
MYC4
<---------
ARR11(3)
--------->
ANAC55(2)
--------->
ZAT2
-------->
TGA1a
<---------
AGP1
<---------
ANAC55(2)
<---------
ZAT2
---------
TGA1a
<---------
ARR14(3)
--------->
TGA1a
<---------
ZAT18
---------
ANAC55(2)
--------->
ZAT2
<--------
ABF1
--------->
ZAT18
---------
O2
--------->
ARR14(3)
<---------
O2
---------->
DOF2
-------->
O2
<---------
ARR14(2)
=======================
bZIP_DOF
------->
TEIL
-------->
ANAC46
--------->
ARR11(3)
--------->
O2
<---------
DOF5.7(2)
--------->
YAB1
-------->
ANAC55(2)
<---------
At4g35610
--------->
ICU4
----------->
GT1
<---------
SPL7
---------->
OsbHLH66
--------->
MYB46(3)
<-----------
HVH21
----------->
RAV1(2)
<---------------
AtSPL3
->
DOF2
------>
NtERF2
----------->
HVH21
<-----------------------
TaNAC69(2)
<---------
AHL20(2)
--
acacgtggctgcctacaagatctctaacagctggttaatgacacgtgtcatagttaaagtccacctggatggatattatatcatggtgtacgtatacaaa
99500
--------->
MYB52(1)
<-----------
GT1
<---------
MYB52(2)
--------->
YAB1
--------->
AHL20(2)
---------->
DOF2
--------->
ANAC55(2)
-
--------->
MYB52(1)
<---------
TOE2(3)
--------->
LBD16
--------->
DAG2
--------->
WOX13(1)
--------->
ANAC46
---------->
DOF2
--------->
AHL20(2)
<---------
YAB1
<----
--------->
GT1
--------->
AHL20(2)
<---------
ATHB12
---------->
DOF2
--------->
LBD16
atagttaatccctcttcaaaattgaataaagctaacaaaagtaatcaattaacgtgattaaaaaaaaaaagagaatgctaattggaccccgaaaacatga
99600
--------->
ANAC58
------>
NtERF2
<---------
RAP2.6(3)
----------->
RAV1(1)
<---------
AHL20(2)
<---------
ETT(1)
--------->
ZAT6
--------->
DEAR3(1)
<---------
TOE2(3)
--------->
ATHB12
---------->
DOF2
---------->
DOF2
---------->
DOF2
<---------
ICU4
--------->
AHL20(2)
=============================================================
MADS_MADS
--------->
AtLEC2
--------->
ANAC58
--------->
AHL20(2)
--------->
ICU4
--------------->
AGL15
------>
ZmHOX2a(1)
--------->
MYB52(1)
<---------
AHL20(2)
<---------
ATHB12
<---------------
AGL15
-------->
ARR11(3)
<----------
ID1
--------------->
AGL15
<---------
YAB1
<---------
YAB1
-----
ARR11(3)
--------->
RAP2.6(2)
<---------------
AGL15
<---------
TOE2(3)
<-----------
GT1
tatatcctgcaaaattaaagccgacaaaacgaaagaatgactaattaaagttggaataagactaatgatttttttttttttttttcttattgtggtccaa
99700
--------->
ALFIN1
------->
MYC4
<-------
MYC4
------->
MYC2
<-------
MYC3
------->
MYC3
<-------
MYC2
--------->
ANAC55(2)
<---------
O2
<---------
TGA1a
--------->
TGA1a
=====================
bZIP_DOF
<---------
ARR14(2)
<---------
ANAC55(2)
<---------
ARR11(3)
<------
NtERF2
-------->
P
<
--------->
ARR11(3)
<-----------
HVH21
=============
MYC_MYB
--------->
AHL20(2)
---------->
DOF2
<----------
DOF2
-------
--------->
AHL20(2)
---------->
DOF2
=======================================
bZIP_DOF
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
--------->
ARR14(2)
--------->
O2
-
<---------
AHL20(2)
---------->
DOF2
<-------
TEIL
--------->
DEAR3(1)
----------->
RAV1(1)
<
--------->
AHL20(2)
--------->
AHL20(2)
<---------
CCA1(2)
<---------
GLK1(2)
<---------
ALFIN1
-
tgtaagaaaataaataaaaacatcttatccattaaatcgaaagtagggtccatatcgtaatagccgtcgattctctctttagccaacacgtgttgtcaat
99800
--------->
GLK1(2)
<---------
HSFB2a(2)
------>
MYB83
--------->
ANAC58
<---------
ANAC58
--------->
ANAC46
<---------
ANAC58
--------->
HSFB2a(2)
<---------
GLK1(2)
--------->
ANAC58
--------->
At4g35610
<---------
MYB59
--------->
ANAC55(2)
<---------
At4g35610
----------------->
AGL1
--------->
ANAC58
<-----------
RAV1(2)
<------------
CBF
<---------
ANAC46
<---------
ANAC55(2)
<-----
---------
ZAT2
--------->
ANAC58
<---------
MYB52(1)
<---------
LBD16
<-----
-->
WOX13(1)
<-----------------------
TaNAC69(2)
<---------
ANAC58
<----------
DOF2
----------->
GT1
-------->
At4g35610
--------->
ANAC46
<---------
ANAC58
<---------
HSFC1(2)
-------
---------
At4g35610
------>
MYB46(1)
<---------
ANAC46
--------->
HSFC1(2)
--------->
At5g28300
-------->
ZAT2
--------->
ANAC58
---------->
ID1
<---------
LBD16
--------->
ANAC58
ccagctgtttcagatgcttaccaagccaaacaagttattgaaactgtgtcgttttgtgtccctaactcggaagcttttacggaagaaactgtaaatttgg
99900
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
LBD16
--------->
ANAC58
------>
NtERF2
---------->
DOF2
<---------
HSFC1(2)
<----------
DOF2
<---------
PCF2
------------------------>
ANAC81
--------->
ANAC58
--------->
TCP20
--------->
ANAC58
--------->
HSFC1(2)
------>
ZmHOX2a(2)
<---------
PCF5
--------->
ANAC58
---------->
DOF2
--------->
ARR11(3)
-
MYB46(1)
----------->
GT1
---------->
DOF2
<-----------
HVH21
<---------
HSFB2a(2)
-
MYB83
*
TSS
--------->
AHL20(2)
--------->
ANAC58
<---------
LBD16
--------->
HSFB2a(2)
-->
MYB59
--------->
ALFIN1
<---------
AHL20(2)
--------->
ANAC58
<------
NtERF2
--------->
ATHB12
<
ttccatggggccagagagtgt
gagaaacgaaaattaaaaaaaaagagaagaaaagccaaaagcttcggtcgcgcaagatcgcttcatttgtttctagagt
100000
<----------
DOF2
<---------
ARR11(3)
--------->
YAB1
<---------
ICU4
-------->
HAHB4
<---------
ATHB51
--------->
ICU4
--------->
YAB1
--------->
MYB52(2)
<---------------
AGL15
--------------->
AGL15
----------------->
AGL3
<-----------
GT1
<-----------------
AGL3
<---------
ARR11(3)
<--------
<----------
DOF2
--------->
ARR11(3)
<-----------
ARR10
<--------
<---------
GLK1(2)
<---------
ATHB12
<---------
MYB46(3)
<-----------
GT1
<--------
-------
TEIL
<-----------------
AGL2
<-----------
GT1
------>
ZmHOX2a(2)
<----------
DOF2
gattcatggattctttaaactactaataatg
gtatctttagttgttacttcgttttctgatctattttacaaatcttactcttttgctctgttttcgtgg
100100
<---------
----------
<---------
YAB1
<----------
<----------
<----------
<----------
<---------
WRKY38(1)
<---------
WRKY12
<<<<<<<<<<
WRKY11
<<<<<<<<<<
WRKY6
<---------
LBD16
<---------
YAB1
<--------
ZAP1
--------->
ICU4
--------->
LBD16
----------->
GT1
<---------
YAB1
------>
ZmHOX2a(1)
-
ANAC46
--------->
YAB1
----------->
RAV1(2)
-
ANAC58
<------
ZmHOX2a(2)
<---------
ANAC46
-
ANAC58
---------->
DOF2
============================
HOX2a_HOX2a
ttttgtttagataaaagtctctgttcttctagtttcttccatcagactgttttctcatggatcagtgatgatttttgtttcctgggtcaacttctgattt
100200
<----------
DOF2
------>
ZmHOX2a(2)
<---------
YAB1
------
AGL15
--------->
ARR11(3)
----->
AGL15
<---------
ARR11(3)
-------
AG
--------->
ANAC58
<----------
DOF2
-------
AGL3
<-----------
GT1
--------->
ARR11(3)
<----------
DOF2
-------
AGL2
----------->
GT1
<---------
ARR11(3)
<---------
At4g35610
<---
-------
AGL1
--------->
MYB59
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
At4g35610
----
tggaatttctgaaaattttggtaaatttactcgatcccattgcgaaatcttacgcatgatctttgtagtttgctctgctcaagactttctttttttttgg
100300
>>>>>>>>
>>>>>>>>
<---------
TOE1(3)
<---------
ARR11(3)
<---------
TOE2(3)
--------->
ARR11(3)
<---------
YAB1
<---------
AHL20(1)
------>
ZmHOX2a(2)
<---------
AHL20(2)
<---------
ARR11(3)
----------->
GT1
<---------
AGP1
<---------
ICU4
<---------
AHL20(2)
--------->
ARR14(2)
<---------
YAB1
--------->
AHL20(2)
<---------
ARR14(2)
--------->
ICU4
<---------
ANAC46
--------->
AHL20(1)
<---------
CCA1(2)
--------->
ZAT14
<---------
ANAC46
<---------
MYB46(3)
------>
ZmHOX2a(1)
<---------
ZAT14
<---------
ANAC58
<------
MYB46(1)
--------->
LBD16
------
ARR14(2)
<XXXXXXXXXXXXXXXXXXXX
MIR863-3P
--------->
AHL20(2)
<---------
LBD16
----->
ARR14(2)
<---------
WOX13(1)
<---------
ANAC58
<------
MYB83
<----------
DOF2
<---------
MYB52(1)
ttctgcagtatgtcttaattgctctgaaacttatgtcttgttgtgtttaatttggtggtgaaatatattgtcttctttattcctggatctgttaagattg
100400
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AGI:
At1g01240.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48635.1)
Range:
from: 99922
to: 101834
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.