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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
---
--------->
YAB1
<---------
ZAT2
---
--------->
ICU4
--------->
ANAC58
---
<---------
ATHB12
--------->
ALFIN1
<---------
YAB1
---
<---------
At4g35610
--------->
ANAC58
<---------
ICU4
--
--------->
MYB46(3)
<---------
ANAC58
--------->
YAB1
>>>>
--------->
MYB52(1)
<---------
ANAC58
<---------
ALFIN1
--------
<---------
MYB52(2)
<---------
ANAC46
------>
ZmHOX2a(1)
--------
ttctcagtaagaatagggtttagggagaaaacaaacaaac
cgctccgatgatgagtattaggcgtgtgtccaagctcctccatctcataatcgtcgagca
26561200
------>
ANAC46
------>
ANAC58
------>
ANAC58
------>
bZIP60(2)
--------->
DEAR3(1)
----->
GAMYB
<---------
DEAR3(1)
<-------
>>>>>
MYB2
<-----------
RAV1(2)
<---------
ANAC46
<-------
->
ANAC58
<---------
LBD16
<---------
ANAC58
<---------
ALFIN1
<---------
YAB1
->
ANAC58
<---------
LBD16
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
YAB1
<
acgccatgtttctgtccggtttcatgctcagggagagaagactggcttcgtcgacgatatcgatctccacttgttcttcatcatcttctaattgtgcttg
26561300
--------->
SPL7
<---------
MYB52(1)
<---------
SPL1(1)
<---------
SPL7
<-----------
HVH21
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
MYB59
<---------
GLK1(1)
<---------
MYB52(1)
--------->
GLK1(1)
------->
GAMYB
--------->
HSFC1(2)
--------->
HSFB2a(1)
-
--------->
TOE2(3)
--------->
MYB52(2)
<---------
HSFB2a(1)
--------->
ZAT18
--------->
MYB46(3)
<-------
TEIL
<------
ZmHOX2a(1)
<---------
ZAT6
---------
--
ANAC58
<---------
At4g35610
<------
ZmHOX2a(1)
--------->
STY1(2)
<---------
ZAT18
--
ANAC58
--------->
At4g35610
--------->
HSFB2a(2)
------>
NtERF2
==================
---------
ALFIN1
<---------
HSFC1(2)
<---------
HSFB2a(2)
--------->
LBD16
<-----------
RAV1(1)
ctcaacctccatttcgctgaagcttcgttgcctaatccatagcttcttcgaggaggagagttccgtccggccatagctagtggtactgttgtgcgcctgg
26561400
--------->
ANAC58
--------->
ANAC58
--------->
ARR14(1)
--------->
CCA1(2)
--------->
DEAR3(1)
--------->
DREB2C(2)
--------->
RAP2.3(3)
--------->
RAP2.3(1)
<---------
At4g35610
------>
NtERF2
<-------
TEIL
--------->
LBD16
--------->
ARR14(2)
--------->
At4g35610
<---------
ATERF1(1)
--------->
ANAC46
<---------
ARR14(2)
----------
<------
MYB83
--------->
ORA47(2)
----------->
GT1
--------->
LBD16
----------->
GT1
--------->
ARR11(1)
------->
GAMYB
<---------
ANAC58
<------
MYB46(1)
<---------
ARR14(2)
<---------
TOE1(3)
<---------
ANAC58
---------->
GT1
--------->
DEAR3(1)
--------->
CCA1(2)
--------->
MYB52(1)
<---------
ANAC46
-->
RAV1(2)
--------->
ZAT6
--------->
ARR14(2)
<---------
TOE2(3)
<---------
LBD16
===
RAV
--------->
MYB59
------>
NtERF2
--------->
ARR11(1)
--------->
MYB46(3)
--------->
GLK1(2)
agatgtgatttggtaactctccgccgactatagatacgatacggagagaaattagggttttcaacaacggaagtagagaagaatttgtagcgggaaagag
26561500
<----------
DOF2
----------->
HVH21
<-----------
GT1
*
TSS
<------
MYB46(1)
<----------
DOF2
--------->
ANAC58
<---------
MYB46(3)
<---------
ANAC58
--------->
RAP2.6(2)
<------
MYB83
<-----------
RAV1(2)
--------->
ANAC58
<---------
AtMYB61
<---------
ANAC58
--------->
LBD16
<--------
P
------>
ZmHOX2a(1)
>
DOF2
<---------
LBD16
<-----------
RAV1(1)
<---------
MYB46(3)
<-------
TEIL
-------
taggcgaaatatgcggagagaccgccat
tgttggacttggtttttcaaattgatagctctcactggttggtttttcctcacaggt
gctttctttagtgat
26561600
<------
NtERF2
------>
NtERF2
------->
GAMYB
<---------
DEAR3(1)
--------->
DEAR3(1)
--------->
ANAC46
<---------
AHL20(2)
--------->
ANAC46
<---------
AHL20(1)
<----
------>
ZmHOX2a(2)
--------->
AHL20(2)
<-----
<---------
ARR11(3)
XXXXXXXXXXXXXXXXXXXX>
MIR4239
--------->
AHL20(1)
<------
--------->
ARR11(3)
--------->
GLK1(2)
--------->
ANAC46
--------->
RAP2.6(2)
--------->
YAB1
--------->
DEAR3(1)
<-----------
GT1
--------->
YAB1
<-----------
GT1
------>
MYB83
--------->
SPL7
<---------
GLK1(2)
<xxxxxxxxxxxxxxxx
smallRNA(le3)
--------->
MYB46(3)
-->
ATHB12
------>
MYB46(1)
----------->
HVH21
----------->
GT1
<---------
ALFIN1
<---------
YAB1
--------->
DEAR3(2)
tagcgaaggaaccaaatatgatcttcatacgacgccgtttcagaatttgttatttccacttacaccccttgttaaatataattcccatttcaaccgcctt
26561700
<---------
HSFC1(2)
--------->
HSFB2a(1)
--------->
HSFC1(2)
--------->
ANAC55(2)
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR14(2)
<----------
DOF2
--------->
YAB1
--------->
ANAC58
<-----------
GT1
<---------
ALFIN1
------>
MYB46(1)
--------->
GLK1(2)
-----
<<<<<<<<<<
GT-3b
--------->
ANAC46
------>
MYB83
--------->
ANAC58
-----
-----
MYB52(1)
-------->
P
----------->
RAV1(1)
--------->
ANAC55(1)
<-----------
GT1
-----
DOF2
<---------
At5g28300
--------->
MYB46(3)
--------->
YAB1
<---------
ICU4
----
DOF2
--------->
ARR14(2)
--------->
AHL20(2)
---------->
DOF2
<---------
LBD16
--------->
YAB1
tatttttctttacccagttacccccctcgttaaatttaagaaccaacataacaaaagcaagaatca
ggcacggaacttctggctaataataacattgcaa
26561800
--------->
YAB1
<---------
ICU4
<-----------
TGA1
<---------
bZIP60(1)
--------->
bZIP60(1)
<---------
TGA2(1)
<---------
ETT(2)
----
--------->
At4g35610
<---------
KAN4(1)
-----
------>
MYB46(1)
--------->
ZAT2
<---------
YAB1
------
<-----------------
AGL1
<---------
At4g35610
<---------
YAB1
--------
----------->
RAV1(1)
<---------
ZAT2
--------->
ICU4
--------->
HSFC1(1)
--------->
ANAC46
------>
MYB83
--------->
TOE1(2)
--------->
TGA2(1)
<---------
HSFB2a(2)
<----------
ID1
<---------
MYB59
------>
ZmHOX2a(2)
--------->
ETT(2)
<---------
HSFC1(1)
---->
ANAC58
--------->
YAB1
--------->
ARR11(3)
--------->
MYB59
------->
TEIL
--------->
HSFB2a(2)
---->
ANAC58
--------->
MYB52(1)
----------->
HVH21
------->
TEIL
<-----------
STF1
------------
gtcaataagcgacacaaacagaaccaaattggtatgaccttgatcgtatgaagctgagttatgtcgtcatcatgaatgttctatacattctctagaaaag
26561900
-----
-----
<---------
At4g35610
--------->
At4g35610
--------->
ALFIN1
<---------
AtMYB61
<---------
TOE1(3)
--------->
ZAT2
-------
--------->
ANAC58
------->
TEIL
--------->
At4g35610
------->
GT1
<-----------
GT1
<---------
YAB1
----------->
RAV1(2)
------>
GT1
<---------
YAB1
<---------
ICU4
<---------
ZAT2
<-------
TEIL
--->
DAG2
<---------
AHL20(2)
<----------
DOF2
--------->
ICU4
<---------
At4g35610
-->
DOF2
------>
ZmHOX2a(1)
----------->
HVH21
--------->
TOE2(3)
<-----------
RAV1(2)
<----
--->
AGL15
<-----------
GT1
--------->
ANAC58
<-----------
GT1
<----------
DOF2
<---------
TOE2(3)
gttaaaacaaaacccattttcctatttttattcacaaggcctgaagctttgattcaacctca
ttatgaatcttttggagacagctgaggttgagcttcat
26562000
<-------
TEIL
--------->
SPL7
--------->
TOE1(2)
<---------
SPL7
<------
MYB83
<---------
HSFB2a(1)
--------->
HSFB2a(1)
<------
MYB46(1)
--------->
HSFC1(2)
<---------
HSFC1(2)
--------->
LBD16
<---------
ANAC58
<---------
HSFB2a(2)
<---------
ANAC46
<---------
ZAT14
<---------
ANAC58
<---------
ZAT18
--------->
HSFB2a(2)
--------->
ANAC58
------>
NtERF2
<---------
LBD16
--------->
ANAC58
<---------
ALFIN1
--------->
YAB1
--------->
MYB59
--------->
ZAT18
<-------
GAMYB
<---------
ARR14(2)
<--
<---------
YAB1
<---------------
AtSPL3
<---------
YAB1
--------->
ARR14(2)
---
---->
At4g35610
--------------->
AtSPL3
--------->
LBD16
------>
ZmHOX2a(2)
-----
------>
RAV1(2)
<---------------
AtSPL8
<---------
ALFIN1
<---------
MYB46(3)
--------->
LBD16
------>
NtERF2
-->
REM1(1)
<---------
LBD16
--------->
ANAC46
--------->
LBD16
<---------
At4g35610
--------->
AtMYB61
-----
At4g35610
<------
ZmHOX2a(1)
--------->
ZAT14
<---------
AtMYB61
===========================
ctgatgataacattccgggaggaaggtacgaccaggccaagactccactcccgagtgtgatggttgcagctattgatccccaaatccacctctgcctcct
26562100
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AGI:
At5g66470.1
Description:
GTP binding / RNA binding. similar to GTP-binding protein (ERG) [Arabidopsis thaliana] (TAIR:AT1G30960.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45853.1); contains InterPro domain K homology-like, alpha/beta (InterPro:IPR015946); contains InterPro domain K Homology, type 2; (InterPro:IPR004044); contains InterPro domain GTP-binding protein Era; (InterPro:IPR005662); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain K Homology, prokaryotic type; (InterPro:IPR009019); contains InterPro dom
Range:
from: 26558921
to: 26561585
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g66480.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50910.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45854.1)
Range:
from: 26561767
to: 26564212
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.