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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
--------->
YAB1
----------->
HVH21
<---------
ATHB12
--------->
ANAC55(1)
--------->
WOX13(1)
<---------
ANAC55(2)
---------->
DOF2
XXXXXXXXXXXXXXXXXXXX>
MIR3440B-5P
----------->
GT1
<---------
ZAT6
----
--------
YAB1
<---------
ALFIN1
--------->
ANAC55(2)
<---------
YAB1
--------->
DAG2
<-----
tatgttttctcaatcacatccacttcttaagaagacataacatgtaacatgttgatatgaaaccatgtgattagtggaaatgaaaagcagaatgtaagga
25986000
--------->
ANAC58
<----------
DOF2
--------->
KAN4(2)
--------->
ATHB12
--------->
ANAC46
<---------
YAB1
--------->
ANAC58
<-----------
HVH21
<-----------
GT1
---------->
DOF2
------->
GT1
--------->
YAB1
<---------
WOX13(1)
---------->
DOF2
-
ZmHOX2a(1)
<---------
ATHB12
<---------
MYB46(3)
----------->
RAV1(1)
--------->
MYB46(3)
-
ggttacaatgtcagaacatagcaaatcatatataacttgattgttcctttcttcaaagcaacaatggaattggaatatagcatccactaaaagccttcaa
25986100
----
--------
-------->
HAHB4
<---------
ANAC58
--------->
ICU4
<---------
ANAC58
<---------
ARR11(3)
<---------
MYB52(1)
--------->
TOE2(2)
--------->
LBD16
--------->
TOE1(2)
--------->
ICU4
<---------
ANAC55(2)
--------->
YAB1
--------->
ICU4
--------->
ANAC55(2)
<---------
ATHB12
---------->
DOF2
<---------
ANAC58
------>
MYB46(1)
<---------
ICU4
--------->
ANAC58
<---------
ANAC58
--
------>
MYB83
--------->
YAB1
--------->
ANAC46
<---------
ICU4
<---------
ANAC58
<---------
ANAC55(2)
-------->
WOX13(1)
--------->
ANAC58
--------->
YAB1
<---------
ANAC58
--------->
ANAC55(2)
accaatcatacgagataataatgcgatttcaaaactgatcaagccataaagatgaataatgagccatagttgcattcgttcaatccgtgatttcgtaacg
25986200
<---------
YAB1
--------->
YAB1
--------->
ICU4
--------->
TOE2(3)
----------->
HVH21
------->
TEIL
-
<----------
ID1
<---------
O2
<---------
YAB1
--------
----->
ANAC46
--------->
MYB52(1)
<---------
ICU4
<---------
ATHB12
-->
DOF2
----------->
GT1
<---------
WOX13(1)
------->
TEIL
<---------
ATHB12
--------->
WOX13(1)
-------->
DOF2
---------->
DOF2
<----------
ID1
--------->
O2
--------->
CCA1(2)
--------->
YAB1
cgaaaggccaaaacgttattaagttccaatccaaagtaattgacaaaaaaacaaatggacctcgtgacaatgatgatatgaatctctcccaatcacaaaa
25986300
--------->
ANAC58
--------->
RAP2.6(2)
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
<---------
WOX13(1)
<------------
CBF
--------->
ATHB12
<---------
YAB1
--------->
At5g28300
<---------
ATHB12
<---------
ANAC58
--------->
ICU4
--------->
ZAT6
----------->
GT1
<---------
ANAC58
--------->
AHL20(2)
--------->
MYB46(3)
<---------
ZAT6
------->
GAMYB
--------->
ANAC46
--------->
YAB1
<---------
MYB52(2)
<---------
TOE2(3)
--------->
MYB46(3)
--------->
ANAC58
<--------
XXXXXXXXXXXXXXXXXXXX>
MIR851-3P
<---------
YAB1
--------->
At4g35610
------>
NtERF2
<---------
YAB1
---------->
GT1
<---------
TOE1(3)
----------->
GT1
<---------
DEAR3(1)
----------->
TBP
--
------->
AGL15
---------->
DOF2
--------->
YAB1
--------->
MYB52(1)
--------->
DEAR3(1)
---------
atgagtaacaaacaaacactaaaaagattagggttaaaaatcataaatagtcaaaatcaacggccgtgattgaaagccaccctataaattctaataatca
25986400
<-------
GAMYB
<---------
ANAC58
<---------
ANAC58
*
TSS
<---------
GLK1(2)
<------------
CBF
<-------
GAMYB
--------->
ARR14(2)
>>>>>>>>>>>>>>>>>
LFY
<---------
ARR14(2)
--------->
ANAC58
-
ICU4
--------->
ANAC58
<---------
ANAC58
--------->
ALFIN1
--------------------->
WRI1
------->
GLK1(2)
<---------
YAB1
--------->
ZAT6
--------->
GLK1(2)
<---------
AtLEC2
>
YAB1
--------->
ANAC58
<---------
ANAC58
<-----------
RAV1(1)
<---------
MYB46(3)
--------->
ANAC58
gtttctgagtgaag
ccattgttatttgttttcgttgccactctaacaca
atgtgtgggattctcgctgttcttggttgcatcgacaactctcaagctaaa
25986500
<---------
ICU4
<---------
AHL20(2)
--------->
ARR14(2)
--------->
YAB1
<---------
YAB1
<---------
ARR14(2)
<---------
ATHB12
--------->
YAB1
<---------
TOE2(2)
--------->
ICU4
----------->
GT1
<---------
CCA1(2)
<---------
TOE1(2)
--------->
WOX13(1)
--------->
GLK1(2)
-
cgttctcgtatcatcgaactctctcgcag
gtactcttctgtttccattgaatcaatcatgaagcctgcccaatgttactgaagaatcgtttataatttgg
25986600
<---------
ARR14(2)
--------->
ARR14(2)
<---------
DAG2
--------->
DOF5.7(2)
----------->
GT1
<---------
ANAC58
<---------
MYB46(3)
<---------
ANAC58
<------
MYB46(1)
<---------
ANAC58
<------
MYB83
<---------
DAG2
<---------
ANAC58
<---------
WOX13(1)
<----------
DOF2
--------->
ALFIN1
<<<<<<<<<
RAP2.2
<---
<---------
TOE2(3)
<---------
GLK1(1)
--------->
YAB1
<---------
TOE2(3)
<-----
--------->
DOF2
<------
ZmHOX2a(1)
------->
TEIL
<---------
TOE2(3)
<----------
DOF2
aataaaggtttcaacttttttagaggaaatgtgtgcgtttactcaattgatgaatcatagatagacccgaattgatgtttagattggttacttttttttg
25986700
<---------
ZAT18
<---------
ZAT14
<---------
WRKY18(1)
--------->
ZAT14
--------->
WRKY12
--------->
ZAT18
--------->
WRKY38(1)
--------->
ALFIN1
<---------
ICU4
<---------
ANAC46
--------->
ATHB12
<---------
WOX13(1)
<---------
ANAC58
-------->
ATHB1
--------->
ATHB12
<---------
ANAC58
<---------
ATHB12
------>
ZmHOX2a(1)
--------->
ARR11(3)
--------->
ICU4
<---
------
ANAC46
--------->
ICU4
<---------
YAB1
<---------
YAB1
<----
----
ANAC46
<---------
YAB1
<---------
YAB1
--------------------->
WRI1
<------
tgtag
attgaggcacagaggtcctgattggagtggactccattgttatgaagattgttatcttgcccatgagcgtttagccatcattgaccctacttcag
25986800
--------->
MYB46(3)
<----------
DOF2
-------->
P
------->
TEIL
------>
MYB46(1)
<---------
ZAT14
------>
MYB83
<---------
ZAT18
<---------
MYB59
--------->
ZAT14
--------->
AtMYB61
--------------->
AtSPL8
---
ZmHOX2a(1)
<-----------
HVH21
----------->
GT1
--
-----
At4g35610
<---------
DEAR3(1)
--------->
WOX13(1)
<---------
AHL20(2)
-----
RAV1(2)
xxxxxxxxxxxxxxxx>
smallRNA(s)
<----------
DOF2
--------->
YAB1
--------->
AHL20(2)
gagaccaacctctctataacgaagacaagaccgtcgctgtcact
gtactttctcttgtctttcaaacaatgtcaattagtatcatgtgtaaataaatgtg
25986900
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AGI:
At5g65010.1
Description:
ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing). similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.2); similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.1); similar to unknown [Populus trichocarpa] (GB:ABK95431.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Asparagine synthase, glutam
Range:
from: 25986415
to: 25989801
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.