Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                         <-----------GT1
          --------->YAB1                ----------->HVH21
         <---------ATHB12             --------->ANAC55(1)
       --------->WOX13(1)             <---------ANAC55(2)                      ---------->DOF2
     XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P ----------->GT1                 <---------ZAT6            ----
--------YAB1    <---------ALFIN1      --------->ANAC55(2)         <---------YAB1--------->DAG2<-----
 
tatgttttctcaatcacatccacttcttaagaagacataacatgtaacatgttgatatgaaaccatgtgattagtggaaatgaaaagcagaatgtaagga  25986000
                                                    --------->ANAC58
                                           <----------DOF2
                                      --------->KAN4(2)
                                  --------->ATHB12  --------->ANAC46
                                 <---------YAB1     --------->ANAC58
     <-----------HVH21       <-----------GT1      ---------->DOF2
------->GT1           --------->YAB1<---------WOX13(1)                               ---------->DOF2
-ZmHOX2a(1)          <---------ATHB12<---------MYB46(3)----------->RAV1(1)     --------->MYB46(3)  -
 
ggttacaatgtcagaacatagcaaatcatatataacttgattgttcctttcttcaaagcaacaatggaattggaatatagcatccactaaaagccttcaa  25986100
                                                                                                ----
                                                                                            --------
               -------->HAHB4                                                            <---------ANAC58
              --------->ICU4                                                             <---------ANAC58
          <---------ARR11(3)                                                       <---------MYB52(1)
   --------->TOE2(2)                                                              --------->LBD16
   --------->TOE1(2)                                --------->ICU4               <---------ANAC55(2)
  --------->YAB1                             --------->ICU4                      --------->ANAC55(2)
 <---------ATHB12                          ---------->DOF2                       <---------ANAC58
------>MYB46(1)<---------ICU4        --------->ANAC58                            <---------ANAC58 --
------>MYB83--------->YAB1           --------->ANAC46<---------ICU4 <---------ANAC58     <---------ANAC55(2)
-------->WOX13(1)                    --------->ANAC58--------->YAB1 <---------ANAC58     --------->ANAC55(2)
 
accaatcatacgagataataatgcgatttcaaaactgatcaagccataaagatgaataatgagccatagttgcattcgttcaatccgtgatttcgtaacg  25986200
                                                                     <---------YAB1
                                                                   --------->YAB1
                                                                  --------->ICU4
          --------->TOE2(3)                                 ----------->HVH21------->TEIL          -
 <----------ID1                                           <---------O2    <---------YAB1    --------
----->ANAC46                                     --------->MYB52(1)<---------ICU4       <---------ATHB12
-->DOF2  ----------->GT1           <---------WOX13(1) ------->TEIL<---------ATHB12    --------->WOX13(1)
-------->DOF2               ---------->DOF2 <----------ID1--------->O2  --------->CCA1(2)--------->YAB1
 
cgaaaggccaaaacgttattaagttccaatccaaagtaattgacaaaaaaacaaatggacctcgtgacaatgatgatatgaatctctcccaatcacaaaa  25986300
                                                                           --------->ANAC58
                                                                         --------->RAP2.6(2)
                                                                      --------->ANAC58
                                                                      --------->ANAC58
                                                                    ---------->DOF2
                                                                 <---------WOX13(1)
                                                                <------------CBF
                                                               --------->ATHB12
                                                              <---------YAB1
                                                             --------->At5g28300          <---------ATHB12
                                                            <---------ANAC58              --------->ICU4
            --------->ZAT6 ----------->GT1                  <---------ANAC58     --------->AHL20(2)
    --------->MYB46(3)     <---------ZAT6                ------->GAMYB--------->ANAC46  --------->YAB1
    <---------MYB52(2)    <---------TOE2(3)             --------->MYB46(3) --------->ANAC58<--------
XXXXXXXXXXXXXXXXXXXX>MIR851-3P         <---------YAB1  --------->At4g35610------>NtERF2<---------YAB1
---------->GT1            <---------TOE1(3) ----------->GT1<---------DEAR3(1)   ----------->TBP   --
------->AGL15     ---------->DOF2    --------->YAB1   --------->MYB52(1) --------->DEAR3(1)---------
 
atgagtaacaaacaaacactaaaaagattagggttaaaaatcataaatagtcaaaatcaacggccgtgattgaaagccaccctataaattctaataatca  25986400
                                                                      <-------GAMYB
                                                                      <---------ANAC58
                                                                      <---------ANAC58
              *TSS                                    <---------GLK1(2)
            <------------CBF<-------GAMYB             --------->ARR14(2)
         >>>>>>>>>>>>>>>>>LFY                         <---------ARR14(2)                 --------->ANAC58
-ICU4   --------->ANAC58   <---------ANAC58     --------->ALFIN1  --------------------->WRI1
------->GLK1(2) <---------YAB1           --------->ZAT6--------->GLK1(2)  <---------AtLEC2
>YAB1   --------->ANAC58   <---------ANAC58     <-----------RAV1(1)  <---------MYB46(3)  --------->ANAC58
 
gtttctgagtgaagccattgttatttgttttcgttgccactctaacacaatgtgtgggattctcgctgttcttggttgcatcgacaactctcaagctaaa  25986500
                                                    <---------ICU4                      <---------AHL20(2)
                         --------->ARR14(2)         --------->YAB1                      <---------YAB1
                         <---------ARR14(2)        <---------ATHB12                   --------->YAB1
                       <---------TOE2(2)           --------->ICU4                 ----------->GT1
    <---------CCA1(2)  <---------TOE1(2)         --------->WOX13(1)             --------->GLK1(2)  -
 
cgttctcgtatcatcgaactctctcgcaggtactcttctgtttccattgaatcaatcatgaagcctgcccaatgttactgaagaatcgtttataatttgg  25986600
                                  <---------ARR14(2)
                                  --------->ARR14(2)                                   <---------DAG2
                                 --------->DOF5.7(2)                             ----------->GT1
                               <---------ANAC58                                  <---------MYB46(3)
                               <---------ANAC58                                  <------MYB46(1)
                           <---------ANAC58                                      <------MYB83
           <---------DAG2  <---------ANAC58                                    <---------WOX13(1)
           <----------DOF2 --------->ALFIN1                                  <<<<<<<<<RAP2.2    <---
 <---------TOE2(3)     <---------GLK1(1)           --------->YAB1           <---------TOE2(3) <-----
--------->DOF2       <------ZmHOX2a(1)           ------->TEIL         <---------TOE2(3)<----------DOF2
 
aataaaggtttcaacttttttagaggaaatgtgtgcgtttactcaattgatgaatcatagatagacccgaattgatgtttagattggttacttttttttg  25986700
                             <---------ZAT18
                             <---------ZAT14                                       <---------WRKY18(1)
                             --------->ZAT14                                      --------->WRKY12
                             --------->ZAT18                                      --------->WRKY38(1)
                            --------->ALFIN1                                   <---------ICU4
                          <---------ANAC46                                     --------->ATHB12
                      <---------WOX13(1)                <---------ANAC58       -------->ATHB1
                    --------->ATHB12                    <---------ANAC58      <---------ATHB12
                   ------>ZmHOX2a(1)                  --------->ARR11(3)      --------->ICU4    <---
------ANAC46       --------->ICU4             <---------YAB1                  <---------YAB1   <----
----ANAC46         <---------YAB1          <---------YAB1     --------------------->WRI1     <------
 
tgtagattgaggcacagaggtcctgattggagtggactccattgttatgaagattgttatcttgcccatgagcgtttagccatcattgaccctacttcag  25986800
    --------->MYB46(3)                      <----------DOF2
   -------->P                             ------->TEIL
   ------>MYB46(1)                      <---------ZAT14
   ------>MYB83                         <---------ZAT18
 <---------MYB59                        --------->ZAT14
 --------->AtMYB61                    --------------->AtSPL8
---ZmHOX2a(1)                     <-----------HVH21                               ----------->GT1 --
-----At4g35610                <---------DEAR3(1)                     --------->WOX13(1) <---------AHL20(2)
-----RAV1(2)       xxxxxxxxxxxxxxxx>smallRNA(s)        <----------DOF2  --------->YAB1  --------->AHL20(2)
 
gagaccaacctctctataacgaagacaagaccgtcgctgtcactgtactttctcttgtctttcaaacaatgtcaattagtatcatgtgtaaataaatgtg  25986900
<- Previous    Next ->

AGI:  At5g65010.1   
Description:  ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing). similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.2); similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.1); similar to unknown [Populus trichocarpa] (GB:ABK95431.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Asparagine synthase, glutam
Range:  from: 25986415    to: 25989801    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.