Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                                             -------
                                                                                           ---------
                                                                                           <--------
                                                                                           <--------
                                                                                           <--------
                                                                                           <--------
                                                                                           <--------
                        <---------ARR11(3)                                                <---------
                        --------->ARR11(3)                                               <----------
                    --------->ANAC58                    <---------At4g35610              --------->MYB52(1)
                    --------->ANAC58               <-------GAMYB            --------------->AGL15
                 ----------->TGA1                 <---------MYB46(3)        <---------------AGL15
           ---------->DOF2                   <---------AHL20(2)            <-----------------AGL3
--->YAB1  XXXXXXXXXXXXXXXXXXXX>MIR1886.1 <---------GLK1(2)                 <-----------------AG
 
taagaaaaaatgagaaaagagtgacgaaatctttaaaacagacagaatttttttggttgagcaaacaaaacttagttatcaaattttggaaataacgtgt  25848700
                        <--------ATHB1
                        -------->ATHB1                                                      --------
 --------->ALFIN1      <---------ATHB12                                                     <-------
-->ALFIN1              <---------YAB1                                                       <-------
>ANAC55(2)             --------->ICU4                                                       --------
-ANAC55(1)           --------->YAB1                       --------->YAB1                    <-------
-ANAC58            ------>MYB83<-------TEIL--------->ARR11(3)                             ----------
-ANAC46            ------>MYB46(1)         <---------ARR11(3)                           ---------->DOF2
-ANAC58<---------GLK1(2)--------->ATHB12   --------->AHL20(1)                        ----------->GT1
-ANAC55(2) <----------DOF2<---------WOX13(1)           <---------CCA1(2)            --------->DAG2
--------------TaNAC69(2)<---------ICU4    --------->RVE1(1)                        ---------->DOF2
-GT1<---------ANAC46------------>ATHB5    --------->CCA1(1)--------->TOE2(3)    --------->YAB1
 
tgaagtggctgattcttttacctacaatgattgattcatcgacaaatatcttgttcgtatatcatcaattctaaattcttcaaaaataaagtaaagatac  25848800
                                                --------->ATHB51
                                                <---------ICU4
                                                --------->ATHB12
                                        --------->AHL20(2)
                                        <---------AHL20(2)                                      ----
                     ----------->GT1   <---------AHL20(2) ------>MYB83                     ---------
                  <---------At4g35610  --------->AHL20(2) ------>MYB46(1)                  <------MYB83
                  --------->ZAT2   <---------AHL20(2)>>>>>>>>>>WRKY43                  --------->ATHB12
->ARR14(2)        --------->At4g35610  <---------AHL20(1)----------->RAV1(1)      --------->ARR11(3)
--GLK1(2)         <---------ZAT2  --------->AHL20(2) >>>>>>>>>>WRKY26            <---------CCA1(2)
--ARR14(2)       --------->GLK1(2)<---------AHL20(2) >>>>>>>>>>WRKY38          --------->AHL20(2)
->ARR11(3)       ------->TEIL  ------->TEIL <---------AHL20(2)                 <---------AHL20(2) --
--ARR11(3) ----------->HVH21<---------ANAC55(2)--------->ICU4          ----------->GT1<---------YAB1
->ARR10    ----------->TGA1 --------->ANAC55(2)<---------YAB1          <---------ANAC55(2) <------MYB46(1)
 
tcaaatgtaatgaaatgacgaagctggaaaaacgtattttaatttaattcattatttgaccaacaatttgcatcatgtgaatttaaatcttgataggtca  25848900
                                                                            --------->ATHB12
                                                                       --------->TOE1(3)
                                                                       --------->TOE2(3)
                                                                    <---------DOF5.7(2)
                      --------->AtLEC2                    --------->YAB1--------->DOF5.7(2)
                 --------->ANAC46                    <---------YAB1<---------ARR14(2)
               --------->ANAC46      ------>ZmHOX2a(1)   <---------ATHB12  <---------YAB1
----->ICU4   <---------ALFIN1  <---------ICU4      --------->YAB1  --------->ARR14(2)      ---------
-->GT1     -------->P--------->TOE1(2)        --------->ZAT18   --------->ANAC46      <---------AHL20(2)
------->YAB1 --------->AtMYB61<---------ATHB12<---------ZAT18 --------->MYB52(1)      --------->AHL20(2)
 
atattagtataaactaccacactacatgcgaaaatcattcctcatttagtgcaattacaaatgataaacggaaacgttatcatttgtatttattttgtaa  25849000
                                         ------>ZmHOX2a(1)
                --------->At4g35610  --------->ARR14(2)
         --------->ANAC58            <---------ARR14(2)
         --------->ANAC58            --------->GLK1(2)
  <---------AHL20(2)              --------->ANAC58                                          ------>ZmHOX2a(1)
<---------ANAC55(2)               --------->ANAC58                                          --------
--------->ANAC55(2)          <----------ID1                      --------->LBD16           ---------
-->GT1   --------->ANAC46  ---------->DOF2 <----------DOF2 *TSS --------->ANAC46          <---------
 
aatatgtaattcaagaaactgctcagaatataaagacaagaatcctctttcttccatctctatctctccgtaaacagttgctcaaaaccttcttcctgaa  25849100
                                                    --------->TOE1(3)
                        ------>ZmHOX2a(1)           --------->TOE2(3)
     <------------------------ANAC81        --------->At4g35610                ----------->RAV1(1)
<---------ANAC58     ------>ZmHOX2a(1)      <---------At4g35610        ----------->RAV1(1)
<---------ANAC58    <---------ALFIN1  <----------DOF2   <-----------ARR10--------->ANAC46
->LBD16           ------>ZmHOX2a(1)  <---------DAG2 ------->GAMYB  <---------ARR14(2)--------->YAB1
------>AGL15<---------At4g35610--------->TOE2(3)  -------->P  --------->At4g35610 --------->YAB1
--------AGL1--------->At4g35610--------->TOE1(3)--------->MYB46(3) --------->ARR14(2)--------->ATHB51
 
atggcttcttctctcatcttcctcctcctcgttaccctaaccttttcagcatcaaccctaatctcagccaaatccaacacaacaacaataatcgaatcaa  25849200
                                                                             --------->ARR11(3)
                                                                           --------->DAG2
                                                                         ---------->DOF2
                                                                   <---------RAP2.6(3)
                                                                   ----------->RAV1(1)
                                                                   ------>NtERF2
                                                                  ------->GAMYB
                                                                  --------->ANAC46
                                                                  --------->RAP2.3(3)
                                                                  <---------ETT(1)
                                                                  ----------->HVH21
                                                                  --------->DREB2C(2)
                                                                  --------->DEAR3(1)
                                                                  --------->RAP2.6(2)
                                                                  --------->At1g77200
                                  --------->At4g35610           --------->At4g35610                <
                                  --------->ZAT2                --------->ZAT2                   <--
                                  <---------At4g35610           <---------At4g35610             ----
                                  <---------ZAT2               --------->DEAR3(1)               <---
                           <---------ANAC58                   --------->MYB46(3)            <-------
                      --------->GLK1(2)   <---------ARR14(2)----------->RAV1(1)           <---------ICU4
      --------->TOE2(3)    <---------ANAC58  <---------ETT(1) <---------ALFIN1       ------>NtERF2<-
     <----------ID1  <---------GLK1(2)    --------->ARR14(2)<---------ALFIN1 <---------ARR11(3)<----
 
cttgcaaaaccacaaactactacaaattctgcgtctcagctctcaaatccgacccaagaagtcccacagccgacacaaaaggtctcgcctccattatggt  25849300
                                                            --------->At5g28300
                                                          <------NtERF2
                                                         ------>NtERF2
                                                        <---------ALFIN1
                          --------->DEAR3(1)            --------->DEAR3(1)
                         --------->ANAC46              --------->MYB46(3)
   <------MYB46(1)     --------->AtMYB61              --------->LBD16
   <------MYB83        <---------ALFIN1               ------>NtERF2
  <---------AtMYB61 --------->AtMYB61                 <---------ATERF1(1)
<-------GAMYB     <---------ATERF1(1)                --------->ANAC46
---------DEAR3(1) ------>NtERF2                      --------->ANAC58
-------ORA47(2)  <---------ALFIN1                    --------->ANAC58
----->ETT(1)     --------->DEAR3(1)                 --------->MYB46(3)              --------->ARR11(3)
------DEAR3(1)--------->ANAC58                    ------>MYB83 ---------->DOF2      <---------ARR11(3)
--YAB1        --------->ANAC58                    ------>MYB46(1)                --------->DAG2
-----NtERF2   --------->ANAC46   <-----------GT1  --------->ARR14(2)            ---------->DOF2
-----ORA47(1) ------->GAMYB--------->LBD16        <---------ARR14(2)       <-----------------AGL1
 
cggcgttggtatgacaaacgccacctccaccgcaaattacatcgctggaaacctatccgccaccgtaaaagacaccgttctcaaaaaggtcttacaagat  25849400
                                                                                                ----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                               <----
                                                                                              <-----
                                                                                              <-----
                                                                                              ------
                                                                                              <-----
                                                                                              <-----
                                                                                              <-----
                                                                                              <-----
                                                                                              <-----
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                  ------>ZmHOX2a(2)                          -------
                                                 <------ZmHOX2a(2)                           <------
                                    ----------->HVH21                                        <------
                                    ----------->TGA1         ------->TEIL                   --------
                                  --------->ZAT2<---------ARR14(2)                          <------NtERF2
                                  --------->At4g35610     <---------REM1(1)            --------->ALFIN1
                                  ----------->RAV1(2)  --------->ICU4                  <-----------RAV1(1)
                                  <---------At4g35610  <---------YAB1                  =============
                    ------>NtERF2------>NtERF2  --------->ARR14(2)                    <-------MYC2 <
                    <---------At4g35610         --------->ARR14(3)                    ------->MYC2 <
                    --------->At4g35610         <---------ARR14(3)                    ------->MYC3<-
                --------->ANAC46 --------->LBD16--------->ARR11(3)                    <-------MYC3<-
  --------->LBD16  --------->DEAR3(1)           <---------AGP1                      ------->TEIL<---
  --------->HSFB2a(2)          <---------LBD16  --------->AGP1               ------>NtERF2<---------DEAR3(1)
  <---------HSFB2a(2)   <---------GLK1(2)       <---------ARR11(3) <---------YAB1--------->AtLEC2---
 
tgctccgagaagtatgctctcgccgctgattctctccggctgacgattcaagatcttgatgatgaagcttatgactatgcctccatgcatgtgttggcgg  25849500
      <---------YAB1
 <------ZmHOX2a(1)
----->DEAR3(1)
---->ATERF1(1)
---->RAP2.3(1)
---->RRTF1(1)
--NtERF2
----ORA47(2)
----RRTF1(1)                                                               --------->ALFIN1
>NtERF2--------->YAB1                                                    <---------ANAC46
----ATERF1(1)                                                            <---------ANAC58
----RAP2.3(1)                                                            <---------ANAC58
----RAP2.6(1)                                                          --------->LBD16
----ERF1 ------>ZmHOX2a(1)                                            <---------ATERF1(2)
----DEAR4(2)                                                          --------->ATERF1(2)
---RAP2.6(2)                                                          --------->DEAR3(1)
---RAP2.3(3)                                                     --------->CCA1(2)
---ATERF1(2)                                                     --------->ARR14(1)
---DEAR3(1)                                                     <---------GLK1(2)
---RRTF1(2)                                                     --------->ARR11(1)
---RRTF1(3)              --------->ARR11(3)                     --------->ARR14(2)
-->ATERF1(2)             <---------ARR11(3)                     <---------ARR14(2)
---RAP2.3(2)             <---------AHL20(1)                --------->ALFIN1----------->HVH21
---DREB2C(2)             --------->AHL20(1)          --------->ARR14(2)<---------ATERF1(1)
->ATERF1(1)          <------NtERF2              <------MYB46(1)<---------GLK1(1)
==========RAV       <---------RAP2.6(3)       <--------P --------->LBD16<------NtERF2
---------TOE2(2)    --------->LBD16     ---------->DOF2<---------LBD16<---------DEAR3(1)      ------
---------TOE1(2)   --------->LBD16   <-------GAMYB   <---------ARR14(2)------>NtERF2          <-----
-----NtERF2        --------->ETT(1) ----------->GT1<----------DOF2   --------->ATERF1(1)      ------
----------RAV1(2) <---------LBD16   <------NtERF2 <---------ANAC58   <---------LBD16       <--------
------ANAC46 <---------ICU4       <---------ANAC46<---------ANAC58<-------TEIL             <--------
--->NtERF2   --------->ATHB12    <---------LBD16<------MYB83  ----------->ARR10            ---------
 
cgcaggattatcctaatgtttgccggaatatttttaggcgggttaaagggttggcttatccggtggagattcgccggcgtgaagctagtctgagacgtat  25849600
<- Previous    Next ->

AGI:  At5g64620.1   
Description:  C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2); pectinesterase inhibitor. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT5G46930.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65563.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501)
Range:  from: 25849060    to: 25849728    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.