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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC46
--------->
ANAC58
--------->
SPL7
------->
TEIL
<-------
TEIL
--------->
TOE2(2)
<---------
TGA2(1)
<---------
SPL7
----------->
HVH21
<---------
ANAC55(1)
<---------
ANAC58
--------->
TGA2(1)
<---------
ANAC46
--------->
bZIP60(1)
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
YAB1
<---------
ANAC58
<---------
bZIP60(1)
--------------->
AtSPL3
<---------------
AtSPL8
<---------
TOE2(3)
--------------->
AtSPL8
--------->
TOE2(3)
<---------
ANAC58
--------->
ANAC55(2)
<---------
TOE1(3)
<----------
DOF2
-------->
P
<---------
ANAC58
--------->
ANAC58
--------->
ICU4
--------->
GLK1(1)
------>
ZmHOX2a(1)
<---------------
AtSPL3
<---------
ICU4
----->
GAMYB
<---------
ICU4
--------->
ANAC55(2)
<---------
YAB1
<---------
DOF5.7(2)
---->
MYB52(1)
<-----------
GT1
--------------->
AtSPL8
--------->
ICU4
--------->
DOF5.7(2)
acggagaattcttttgtttaatccttaccacattttcgtaacctattacgtacgtcatttttgtgacatcattaacgtttgaatattcaatatacagaag
25227300
<---------
YAB1
<---------
ANAC46
--------->
bZIP60(1)
<-----------
GT1
<---------
bZIP60(1)
<---------
YAB1
<---------
ANAC46
<---------
ARR11(3)
--------->
ANAC55(2)
----------->
GT1
<---------
ANAC58
---------->
DOF2
<---------
ANAC55(2)
<---------
bZIP60(1)
--------->
MYB52(1)
<---------
ANAC58
----------->
HVH21
--------->
AHL20(2)
<--
------>
MYB46(1)
<-----------
GT1
--------->
ANAC46
--------->
ARR11(3)
--------->
ZAT14
------>
MYB83
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
ARR14(2)
<-----------
GT1
<---------
AHL20(2)
<---------
WOX13(1)
--------->
bZIP60(1)
<---------
AtLEC2
aaaataaccaaatggataagttttattacgtcgtgatgtgattgtctgattaaacgtgacatcaaagaagataattaaacaatttttcatggtatactct
25227400
<--
---
<--
<--
<---
--------->
AHL20(2)
--------->
ALFIN1
<-------
--------->
YAB1
---------->
DOF2
<---------
YAB1
<---------
TOE1(3)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
MYB46(3)
--------
DOF2
<---------
ARR14(2)
--------->
DAG2
<----------
DOF2
----------->
GT1
<---
ctttataaataaaaataccaagaccgataccgatttatttgaaaaagtggagagacttatcttcttttattattctcaacaagtggttaagtttaaacgt
25227500
--------->
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
<---------
MYB46(3)
<---------
AHL20(2)
<---------
MYB46(3)
--------->
MYB52(2)
<---------
ICU4
----
MYB46(1)
<---------
MYB52(1)
--------->
ICU4
------>
ZmHOX2a(1)
------>
MYB52(2)
--------->
bZIP60(1)
<---------
YAB1
--------->
LBD16
----
MYB83
<---------
bZIP60(1)
--------->
YAB1
--------->
At4g35610
-------
MYB46(3)
<---------
bZIP60(2)
--------->
ICU4
----------->
RAV1(2)
------
DEAR3(1)
--------->
O2
<---------
ICU4
<---------
YAB1
--------->
ARR11(3)
--
TOE2(3)
<---------
O2
<----------
DOF2
<---------
ICU4
<---------
GLK1(2)
-
------
AtMYB61
----------->
HVH21
<-------
TEIL
--------->
YAB1
----------->
ARR10
------
tggtggtttatttaatttcatttgacgtcgttagtggtttatgttcattacgctccttgttagaatcatgataattaagttagattttggctcctgaata
25227600
--
---
----
<---
<--------
HAHB4
----------->
GT1
----
<---------
ICU4
<---------
ATHB12
<----
--------->
PCF2
--------->
ATHB12
--------->
WOX13(1)
-----
---------->
DOF2
--------->
YAB1
<---------
WRKY12
--------->
KAN4(2)
--------->
AHL20(2)
<---------
ATHB12
<---------
MYB52(1)
<---------
ICU4
<---------
ICU4
--------->
ICU4
------------>
CBF
----------->
TBP
<---------
AHL20(2)
<---------
YAB1
<-----------
HVH21
<---------
AHL20(2)
-------->
YAB1
<---------
TOE2(3)
--------->
LBD16
<-----------
GT1
<-----
--->
AHL20(2)
<---------
ALFIN1
------------>
CBF
--------->
ANAC46
<----------
DOF2
--------->
AHL20(2)
aataacaattaatgccccactaatgtaatcatttcaatttgtttcttctccgtcaatgaagaaaatacaaagactttatatttcccatataaatattccc
25227700
<<<<<<<<<
CBP60g
<<<<<<<<<
SARD1
--------->
ANAC58
--------->
ANAC58
*
TSS
--------->
PCF2
------------>
CBF
--------->
HVH21
--------->
SPL7
------>
LBD16
--------->
ZAT18
<
----->
ANAC46
<---------
ANAC58
<-
------
LBD16
----------->
GT1
<-
----->
LBD16
<---------
ANAC58
--
-----
LBD16
--------------->
AtSPL3
<-
---->
LBD16
--------------->
AtSPL8
<---------
HSFB2a(2)
<-
----
LBD16
<---------------------
WRI1
--------->
HSFB2a(2)
<----------
DOF2
-----
cgggacccaaatttcgaagc
gtacaatcttctctctcaaaaacgtttcagtttcagaaaacagagcaagaagaaacaactttctctcaa
atgcagacgag
25227800
<---------
WRKY18(1)
--------->
WRKY45
----------->
HVH21
--------->
WRKY38(1)
--------->
WRKY12
--------->
DOF5.7(2)
<---------
MYB52(1)
------>
NtERF2
--------->
LBD16
--------->
ANAC46
--------->
DEAR3(1)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
ARR14(2)
<---------
GLK1(2)
<---------
MYB52(1)
<---------
HSFC1(2)
--------->
ARR14(2)
<---------
HSFB2a(1)
-------
GAMYB
<---------
ZAT2
<-------
GAMYB
--------
DEAR3(2)
<------
NtERF2
--------->
DEAR3(1)
<-
-----
MYB46(1)
<---------
At4g35610
<------
NtERF2
---
--------->
GT1
--------->
At4g35610
------>
NtERF2
<--
-----
MYB83
--------->
LBD16
<---------
ATERF1(1)
--------->
DEAR3(1)
----
--------
MYB46(3)
--------->
ZAT6
--------->
HSFC1(2)
------->
GAMYB
<-----------------
------->
AtMYB77
------>
ZmHOX2a(1)
--------->
HSFB2a(1)
--------->
MYB46(3)
<---------
GLK1(1)
tcggttactctccttctcctctaactctccgagttttggcagcttctcctccgccgttgacctcgctgcaatcgccgctcgagtcgtcgaagaattcaga
25227900
------->
MYC4
------->
MYC2
<-------
MYC4
<-------
MYC2
------->
MYC3
<-------
MYC3
-------->
HAHB4
<---------
O2
<---------
ICU4
--------->
O2
<---------
ICU4
===================
<---------
ATERF1(1)
--------->
TGA1a
------>
MYB46(1)
----------->
HVH21
<---------
TGA1a
------>
MYB83
------>
NtERF2
--------->
YAB1
--------->
ANAC55(2)
<---------
MYB59
--------->
ANAC46
<--------
ATHB1
<---------
ANAC55(2)
--------->
MYB46(3)
<---------
ALFIN1
--------->
ATHB12
<---------
ALFIN1
--------->
AtMYB61
<---------
MYB55(2)
<---------
YAB1
--------->
ANAC58
-----
ZmHOX2a(2)
--------->
ARR14(2)
------>
NtERF2
--------->
AtLEC2
------>
ARR11(3)
<-----------
ARR10
--------->
DEAR3(1)
--------->
ANAC58
-------
ARR11(3)
<---------
GLK1(2)
------>
NtERF2
--------->
ANAC46
---
----->
GLK1(1)
--------->
ARR14(2)
--------->
DEAR3(1)
==============================
bZIP_DOF
----
WRI1
--------->
YAB1
--------->
MYB46(3)
--------->
ICU4
<----------
DOF2
----------->
RAV1(1)
---
gatcacgaccaaacacaatccgattcttctccccaccgcgacgacgataatgattccgacttcgctttcgactgtccaagcaacacgtgttctcagcctc
25228000
<---------
SPL1(2)
<---------
GLK1(2)
<---------
ARR14(2)
----------->
ARR10
--------->
ARR14(2)
<------
NtERF2
<-------
GAMYB
------>
NtERF2
--------->
SPL7
--------->
At1g77200
<---------
MYB52(1)
--------->
RAP2.3(3)
<-----------
HVH21
--------->
DEAR3(1)
<-------
TEIL
<---------
ANAC58
--------->
DREB2C(2)
------>
ZmHOX2a(2)
<---------
ANAC46
----------->
HVH21
<------
ZmHOX2a(2)
--------->
SPL1(2)
--------->
DEAR3(2)
<---------
ARR14(2)
--------->
SPL7
--------->
ERF1
--------->
ARR14(2)
<---------
SPL1(1)
--------->
ORA47(2)
--------->
At4g35610
<---------
MYB52(1)
--------->
RAP2.3(1)
<---------
At4g35610
--------->
SPL1(1)
------>
NtERF2
----------->
ARR10
<---------
ANAC58
----------->
HVH21
------->
GAMYB
--------->
HSFB2a(2)
--------->
At4g35610
--------->
LBD16
--------->
DEAR3(1)
<-----------
HVH21
------------------>
SPL14
--------->
DEAR3(1)
--------->
DEAR3(2)
------->
GAMYB
--------->
MYB52(2)
--------->
ARR14(2)
--------->
TOE2(2)
--------->
MYB46(3)
XXXXXXXXXXXXXXXXXXXX>
MIR842
----------->
GT1
------->
GAMYB
<---------
ATERF1(1)
--------->
MYB52(1)
<---------
MYB52(1)
<---------
GLK1(1)
--------->
MYB46(3)
===========
MYC_MYB
<---------
HSFB2a(2)
<---------
MYB46(3)
<---------
ARR14(2)
<---------
MYB55(2)
------>
ANAC58
<---------
ARR11(3)
--------->
AGP1
<------------------
SPL14
<---------
GLK1(2)
<---------
YAB1
------>
ANAC58
--------->
ARR11(3)
<---------
GLK1(2)
<---------
SPL7
<---------
LBD16
--------->
DEAR3(2)
tcgctaccgccgacgagattttctgtaacggtcagatccgtccgttgaatccgtacggtggaaatgctccggtggaatctcaaccgacgagtaagattac
25228100
--------------------->
WRI1
--------->
LBD16
<---------
RAP2.6(2)
<---------
LBD16
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
--------->
ARR14(1)
--------->
AGP1
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
ARR14(2)
=======
--------->
ARR14(3)
<------
ZmHOX2a(2)
<---------
ARR14(3)
========
<---------
ARR14(2)
<---------
ARR11(3)
---------
===============================
HOX2a_HOX2a
<--------
==========================
HOX2a_HOX2a
---------
<-------
GAMYB
--------->
ARR11(3)
---------
--------->
ETT(2)
<---------
GLK1(1)
<--------
--------->
WRKY38(1)
----------->
ARR10
<--------
--------->
WRKY12
------>
ZmHOX2a(2)
---------
<---------
ANAC46
<------
ZmHOX2a(1)
--------->
ARR14(2)
<--------
<------
NtERF2
================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<---------
DEAR3(1)
<---------
TOE2(3)
<---------
ARR14(2)
<---------
At4g35610
------>
ZmHOX2a(1)
<----------
DOF2
===============
HOX2a_HOX2a
--------->
At4g35610
<---------
ALFIN1
<---------
DEAR3(1)
================
HOX2a_HOX2a
--------->
ZAT2
------>
ZmHOX2a(1)
<---------
ANAC46
<------
ZmHOX2a(1)
<---------
ZAT2
<-
tactcttcctcctcgtcgtcgtagaccggcgttgaggaaactgatgagcgaggatcgagatccggcttcgaattcttcgtcggaagctgaagaggatctt
25228200
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AGI:
At5g62770.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65788.1); contains InterPro domain Protein of unknown function DUF1645 (InterPro:IPR012442)
Range:
from: 25227721
to: 25228833
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.