Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                            <------ZmHOX2a(1)
                       --------->LBD16
                      <---------ANAC58
                      <---------ANAC46                                              <------ZmHOX2a(2)
                      --------->HSFB2a(2)                      <---------ANAC46   --------->At4g35610
                      <---------ANAC58                  <---------At4g35610  <------MYB83
                      <---------HSFB2a(2)            <---------At4g35610 --------->ZAT2
                   --------->ARR14(2)              <---------ANAC46      <---------ZAT2
                   <---------ARR14(2)              <---------RAP2.6(2)   --------->At4g35610
                   --------->GLK1(2)              <---------At5g28300    <---------At4g35610
   --------->ARR11(3) <---------LBD16             --------->RAP2.6(3)  <---------ZAT18      <XXXXXXX
   <---------ARR11(3)<---------LBD16             --------->MYB52(1)    --------->ZAT18     ---------
-------DOF2       <---------ARR14(2)     <---------SPL7 --------->At4g35610  <------MYB46(1)<XXXXXXX
 
ttttaagaacttaagcttggagattccgggaggaaaactcgagtcgaacgagttacggctgatgtcgagggtagtgagcttggtgagatcaaagatagaa  24744700
                                                              <---------ARR14(2)
                                                              --------->ARR14(2)
                                                              --------->GLK1(2)
                                                              ------->TEIL
           ------>MYB46(1)                               <-----------GT1
           ------>MYB83                                  --------->MYB52(1)
        <---------HSFB2a(1)                           --------->ANAC58
        <---------HSFC1(2)                            --------->ANAC58                        <-----
        --------->HSFC1(2)                            --------->ANAC46                       -------
       ------->TEIL<---------GLK1(1)                  <---------ANAC55(2)                   <-------
    <---------MYB52(2)                                --------->ANAC55(1)                  <--------
XXXXXXXXXXXXXMIR773B                          --------->At4g35610       <------ZmHOX2a(1)--------->ARR14(2)
>CCA1(2)--------->HSFB2a(1)     --------->CCA1(2)     --------->ANAC55(2)                --------->GLK1(2)
XXXXXXXXXXXXXMIR773--------->GLK1(1)     <---------ZAT6<---------MYB52(2)                <---------ARR14(2)
 
gttggaaacgaaccttccaaagaattcccactgagatttaagtagagtaagctcgacaagtaacgaatctgtataggaatacgaccagagaggttccggt  24744800
                                                                      <------NtERF2
                                                                     ------>NtERF2
                                                                    <---------ANAC46
                                                                    --------->DEAR3(1)
                                                                --------->SPL7
                                                               ------>MYB83  <---------WRKY18(1)
                                                             --------->AtMYB61              --------
                                                             --------->MYB46(3)     --------->MYB52(1)
                                                             <---------MYB52(2)     <---------DOF5.7(2)
                                                <---------SPL7 --------->MYB52(1)  ----------->HVH21
                                <---------ICU4  ----------->HVH21   <---------DEAR3(1)    ------>NtERF2
                          <---------MYB52(1)  <---------LBD16<---------MYB55(2)   --------->DOF5.7(2)
                         <---------RAP2.6(3)<---------ALFIN1 <---------MYB46(2)   <---------MYB52(1)
    --------->ALFIN1    ----------->GT1    --------->ZAT14  --------->ANAC58 <-----------GT1<-------
------HVH21           XXXXXXXXXXXXXXXXXXXX>MIR171B/C        --------->ANAC58--------->WRKY38(1)
-->LBD16         <---------ANAC58          <---------ZAT14  --------->ANAC46----------->HVH21<------
--ANAC46         <---------ANAC58 <---------YAB1--------->LBD16------>MYB46(1)<---------At5g28300
-LBD16           XXXXXXXXXXXXXXXXXXXX>MIR4240 --------->ANAC46--------->MYB55(1) <-------GAMYB
 
gagagaggtcgagggaaatgacttgagccgttacattatcacagactacaccggaccaagaacaccaaacggcgtcgttttgaccgttaacggggacttt  24744900
                                                                                               -----
                                                                                            --------
                                                                                            --------
                                                                                          ----------
                                           ---------->DOF2                          <------ZmHOX2a(1)
     ---------->DOF2                   <---------TOE1(3)                          <---------TOE1(3)
->HSFB2a(1)                    --------->ARR11(3)              ----------->GT1--------->At4g35610
--HSFB2a(1)      --------->ALFIN1      <---------TOE2(3)      <---------TOE2(3)   <---------TOE2(3)
----DOF2    <------NtERF2      <---------ARR11(3)  --------->CCA1(2)          <---------At4g35610  -
 
ccagtcttgaaaggcagagggagggccagagagagatgttttaagggaaaggagagacaagagttgaggtgaaaacttgagagctaaggaattgaaagca  24745000
                                                                                    --------->AHL20(2)
----->DOF2                                                                  ---------->DOF2
->ANAC58                                                                 --------->HSFB2a(2)
->ANAC58                                                              <----------DOF2---------->DOF2
>DOF2                                     <------ZmHOX2a(1)        <---------TOE1(2)<---------AHL20(2)
--------->DOF2  <------ZmHOX2a(1)        ----------->GT1<----------DOF2  <---------HSFB2a(2)
 
aagaaaggaagtagaagaaggagaaggggatgaagaacaagagaaggagaaatgttcttctttttcatcgtagcttttagaaagaaattaaagtgaagtt  24745100
                <------------CBF
              --------->ARR11(3)
          ----------->GT1
          <---------ANAC46
         --------->ALFIN1                               <---------TOE2(3)
        <---------ZAT14             <---------ZAT6      <---------TOE1(3)    -----------------------
       --------->ALFIN1       --------->ALFIN1      <----------DOF2   >>>>>>>>>TBF1             >>>>
   <------ZmHOX2a(1)       --------->DAG2------------>CBF          ------------------------>ANAC81
 <---------TOE2(3)       ---------->DOF2<<<<<<<<<<<<<<<<<LFY       >>>>>>>>>TBF1         <xxxxxxxxxx
 
gtttgaggaagtgtggtgatattgttgagaaaggtgttagtgttgacaatggtggatttaagggtttgaagaagaagaagatggaagaagagaagagaag  24745200
                              <---------ANAC46
                              <---------ANAC58            <---------TOE2(3)
                              <---------ANAC58            <---------TOE1(3)
                            --------->ALFIN1          <-------GAMYB           <---------ANAC46
                  --------->ATHB12                   <---------MYB46(3)    <---------ANAC58
        <---------REM1(1) <---------ANAC58           <------MYB83 <---------YAB1
      <---------ICU4      <---------ANAC58           <------MYB46(1)       <---------ANAC58
     <---------YAB1       <---------ANAC46       <-----------RAV1(1)       <---------ANAC46
     --------->ICU4<------------CBF              <---------MYB46(3)        <-----------RAV1(1)  ----
->ANAC81<---------YAB1  <---------ZAT14       <----------DOF2     <---------TOE2(3)          -------
>>>>>TBF1        --------->ICU4              <---------ANAC58     <---------TOE1(3)        ---------
xxxxxxsmallRNA(s)<---------YAB1              <---------ANAC58  --------->ICU4--------->ALFIN1-------
 
aagaagtcatgatgaaggtgatgattgtggagtgcgtctaatggtctggcttttgttggttaaggcattatggtttttgtgtggggaagaaaacaaaagc  24745300
                                                                         --------->ARR14(2)
                                                                         <---------ARR14(2)
                                                                  ------->TEIL
                                                                <---------ZAT18               ------
----------->GT1                                  <----------DOF2--------->ZAT14               <-----
<----------ID1                                <-----------GT1 --------------->AtSPL8        <-------
------>DOF2                             <----------DOF2      <---------At5g28300   <---------DAG2<--
-->ANAC58                               <---------DAG2      <-----------GT1  --------------->AtSPL8
->DOF2                               <-----------GT1 <-----------GT1  <---------ANAC46 <-----------GT1
-->ANAC58    ------------>CBF     <----------DOF2<---------DAG2 <---------ZAT14    <----------DOF2
 
aaagagaaaaaaaaaactcaatccattttccactcttcttttacttttcttacttttttcaaattactgtacttcgtatactagtacttttttctgtttg  24745400
        <---------TOE2(3)
        <---------ANAC55(2)
 <----------DOF2                               <---------ARR11(3)
 <---------------AGL15                 --------->ATHB51
 --------------->AGL15                 --------->YAB1
--------->TOE2(3)                     <---------YAB1
--->MYB52(2)                  <---------ARR14(2)
----MYB46(3)                  ------->TEIL     --------->ARR11(3)                <---------ANAC46 --
--MYB52(1)                    --------->ARR14(2)                                 ----------->GT1  --
---------GT1   ------->TEIL----------->GT1     <---------GLK1(2)    --------->YAB1       --------->YAB1
 
ttacctttattaagtatgaaccaaaataaaacgtatatactataattgtagattttgtttttgttttgccatcatacaagtattgggtaaaatcagaaac  24745500
                                                <-----------ARR10--------->AHL20(2)
                                                --------->ARR11(3)
                                                <---------ARR11(3)
                                               <---------CCA1(2) <---------AHL20(2)              <--
   --------->ANAC46                   <---------GLK1(2)        <----------DOF2            <---------
   --------->ANAC58                   --------->ARR14(2)       ------>ZmHOX2a(1)    <---------YAB1 -
   --------->ANAC58                 ----------->ARR10       ---------->ID1         <---------AHL20(2)
---->MYB46(1)  --------->YAB1  --------->AHL20(2)       <----------DOF2            --------->AHL20(2)
---->MYB83    <---------ATHB12 <---------AHL20(2)  <----------DOF2            ------>ZmHOX2a(1) <---
 
caaatcacacaatgccactcatattaaaaaccgattaattagatttgctagtatcttttctttgtcctttaatttcttctcctcattaaaattctttttt  24745600
<- Previous    Next ->

AGI:  At5g61480.1   
Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G28650.1); similar to BAM1 (big apical meristem 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G65700.1); similar to BAM3 (big apical meristem 3), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G20270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60856.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65669.1); similar to hypothetical protein OsJ_024991 [Oryza sativa (japonica cultiva
Range:  from: 24741767    to: 24745068    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.