Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->MYB52(1)                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC46                                        --------->YAB1             --------->ARR11(3)  <---------AHL20(1)             <---------ARR11(3)  --------->AHL20(2)             <---------GLK1(2)   --------->AHL20(1)       <---------YAB1            <---------AHL20(2)                                               <--     --------->YAB1              <---------ARR11(3)                     <------MYB46(1)        ------    <---------YAB1               --------->ARR11(3)                     <------MYB83       ---------- --------->GLK1(2)              --------->AHL20(2)              ------>ZmHOX2a(1)      <------MYB46(1) -------AHL20(2)            <---------YAB1  --------->MYB52(1) --------->TOE2(3)       <------MYB83 ----->AHL20(2)          <---------YAB1<---------YAB1       <---------ARR11(1)        --------->MYB59 ----->AHL20(1)       ---------->ID1  <---------AHL20(2)    --------->GLK1(2)         <---------AtMYB61 ------AHL20(2)   <---------ANAC58    --------->AHL20(2)    <---------ARR14(2)    <---------MYB46(3) ------AHL20(1)   <---------ANAC58<---------AHL20(2)        --------->ARR14(2)<---------YAB1 <-------   aaaattctgataatagattttcttgttgttataaatatattttaataaacgaaacgaagccgaatcctaaaatttggtttctgatggtttggtctgatct  24691900                                          <---------DAG2    <---------AHL20(2)                --------->ETT(2)   <---------AHL20(1)                 <---------ETT(2)  <-------GAMYB                <---------CCA1(2) ---------HVH21          --------->AHL20(2)            --------->MYB52(2)   <-------TEIL >ZmHOX2a(2)    --------->GLK1(2)  <-----------RAV1(1) <---------MYB46(3)<---------At4g35610        - ->HVH21<---------AHL20(2)     <----------DOF2     <---------YAB1        --------->At4g35610 ------->TEIL --ARR14(2)---------->DOF2  <-----------GT1<----------DOF2      <---------YAB1------->TEIL  <--------   ggtcatatattttaaaagaatttgcaattttttctttctgtcgaccttttgatatgtttgttgattttgatatggagatgcatcttcttatcttgtatct  24692000                                                                 <-----------GT1                                                             <----------DOF2                                                            <---------DAG2                                                      <---------O2                                                      <---------bZIP60(1)                                                      --------->bZIP60(1)                                                      <---------ANAC58                                                      <---------ANAC55(2)                                                      --------->O2                                                      --------->TGA1a                                                      <---------bZIP60(2)                                                      <---------TGA1a                                                      <---------ANAC58                                                     ----------->STF1                  ----------->RAV1(1)                                     <---------CCA1(1)<---------ANAC46         ------>MYB46(1)                                     <---------RVE1(1)==================bZIP_DOF     --------->MYB46(3)                                    <---------ARR11(3)--------->ANAC55(2)      ------>MYB83                              --------->YAB1         ----------->bZIP911(1)  --------->AtMYB61                            <---------ARR11(3)       ----------->bZIP910(1)  ------->GAMYB      <----      --------->AHL20(2)    --------->ARR11(3)      <---------TGA2(2)        <---------MYB59    =====      --------->YAB1   --------->AHL20(2)          ----------->TGA1         --------->MYB46(3) <----- -------->TOE2(3)      <---------AHL20(2)          ----------->HVH21   --------->TOE2(3) --------->ANAC46 -CCA1(2)            --------->YAB1 --------->ARR11(3)===============================MYC_MYB   ------   taccacaataatatcaaaaacaaaaataaatatcatgagatattttctccaagatgacgtggccttttctctatctcaaccaaactatccaacacaacct  24692100                                  <---------At4g35610                              <-----------HVH21                             --------->O2                             --------->ANAC58                             --------->ANAC46                             --------->bZIP60(2)                    <-----------GT1                   <---------YAB1 --------->At4g35610                   <---------AHL20(2)                =======================bZIP_DOF                <---------DAG2<-----------TGA1                ----------------------->TaNAC69(2)                <----------DOF2--------->TGA2(2)             <---------ALFIN1--------->ANAC58            --------->ZAT14  <---------O2                                            --------->ANAC46         <---------ANAC58    ==================================================bZIP_DOF         <---------ANAC46    --------->TGA1a                  <---------ALFIN1       <---------ANAC55(2) ------DOF2 <---------ZAT14 <-----------STF1       --------->ARR11(3)           --------->MYB46(3) ======================================bZIP_DOF    <---------ARR11(3)        --------->ANAC46 ----DAG2<---------ANAC58   <-----------bZIP911(1)--------->CCA1(1)        --------->ANAC46  -------- --->TOE2(3)--------->ZAT18<---------ALFIN1       --------->RVE1(1) ---------->DOF2  --------->ANAC55(2)   ttttttttatggcctgcactttttattgtccacgtcatctccttggcctaaaatatcccaagtcccaccattaagctacacaacaacgcgtaagaaaaag  24692200                                                                                  <-----------GT1                                                                             --------->ATHB51                                                                            --------->ICU4                                                                            <---------YAB1                                                                          --------->YAB1                           <----------DOF2                           <---------ANAC58     *TSS             ------------>CBF                                        <---------ANAC58     <----------           --------->ORA47(1)                 <---------At5g28300  <---------ANAC58      --------->ATHB12       <---------ALFIN1  ------>ZmHOX2a(1)   <-----------GT1       <---------ANAC58   <------------CBF -->DOF2  --------->DEAR3(1)      ------->GAMYB               <----------DOF2<---------ICU4<---------WOX13(1)   acttaatctccaccgtccaattctatcctctttcaacggtctctgatttaccatctctctctctctttttcgcgtctcataatttgaccattgattgaca  24692300                                                                                              <------                                                                                              -------                                                                                              <------                                                                                     <---------SPL7                                                                                    <-----------HVH21                                                                                 <---------ATERF1(1)                                                                                 ------>NtERF2-------                                                                                 --------->LBD16-----                                                                                --------->DEAR3(1)                                                                                <---------DEAR3(1)                                                                                --------->ATERF1(2)                                                                                <---------ATERF1(2)                                                                                --------->RAP2.3(2)                                                                               --------->RAP2.3(1)  -                                                                               <---------LBD16-------                                                                               --------->DEAR4(2)   <                                                                               --------->ATERF1(1)  -                                                                               --------->ERF1 <------                                                                              --------->ABI4(1)<-----                                                                              ------>NtERF2  <-------                                                                              <---------ATERF1(1) <--                                                                             --------->DEAR3(1)------                                                                            --------->DEAR3(2)<------                                                                            --------->MYB46(3)<------                                                                           <---------At5g28300<------                                                                         ----------->HVH21   <-------                                                                       <---------At4g35610  ---------                                                                       --------->At4g35610<---------LBD16                                                                    =================================                                                  <---------DAG2    ------>ZmHOX2a(1)<---------MYB52(1)                                               <-----------GT1      =================================                                           --------->GLK1(1)     ==================================== --CBF           <----------DOF2       --------->ETT(1)          ------>ZmHOX2a(1)<------NtERF2<-----   aaacaaaacaatgagtcttctttctcttctcactcttcttgtcggaaattcaccttctctctctctcctcctcatctcaccgccggcgttacgccggatc  24692400      <----------DOF2  ----------->HVH21 <---------MYB52(1) ---AGP1 -->ARR14(2) ---ARR14(2) -->ARR14(3) ->ZmHOX2a(2) -------->LBD16 -->ARR11(3) ---------At4g35610 -------->At4g35610 ---ARR11(3) ----GLK1(1) --CCA1(2) -------LBD16 --->GLK1(1) ---ARR11(1) ---ARR14(3) -----ARR10 --ARR14(1)                           <---------------AGL15 >LBD16                          --------->ATHB12 ==HOX2a_HOX2a                --------->YAB1 ----------->GT1        --------->At4g35610             - =HOX2a_HOX2a                <-------TEIL  ----------->GT1   ------>ZmHOX2a(1)                    <-- =HOX2a_HOX2a    <----------DOF2--------->ICU4        <---------GLK1(2) <----------DOF2   <----------DOF2 -ZmHOX2a(2)     <---------DAG2 <---------YAB1    ---------->DOF2   <---------At4g35610<-----------GT1   tccggtgacttttgttgagcttttttgttgattcatgattcgatatagagaaaaaagaatttcctatttcagctctttgttcttagatttatctttttgt  24692500                         <---------ANAC46                        <---------MYB46(3)                        <------MYB46(1)                        <------MYB83                            <---------ANAC58                       --------->ALFIN1                         <---------ANAC58                       --------->MYB111(2)                      --------->ANAC55(2)                      --------->ALFIN1                <---------MYB46(3)                      <--------P                    <---------ANAC58                    <------MYB46(1)                 <---------ANAC58                    <------MYB83                    <-------GAMYB             <---------TOE2(3)                     <---------MYB46(3)            ----------->GT1           ---------->DOF2  ----------->GT1        <------MYB46(1)              ----------->GT1   <---------YAB1  --------->MYB59                 <------MYB83 <---------ANAC55(2) --------->AHL20(2) --------->ID1 <------ZmHOX2a(1) ---------->DOF2  <---------AtMYB61          <---------ANAC46   <---- -------MYB46(3)   <---------TOE2(3)              --------->MYB59     <----------DOF2        ------>NtERF2   ttgttcttatggataaaggattaggttgggggattaaaagagtagtttttgtttggttgtgagattacttgactttgttaaggggataaattaggcgact  24692600                                                                        <----------DOF2                      --------->TOE2(3)                               <------NtERF2                 ---------->DOF2                                    <---------DEAR3(1)              ----------->GT1                                       --------->ETT(1)          <---------SPL7                                            <---------RAP2.6(2)          --------->ZAT14                         --------->YAB1   --------->RAP2.6(3)             <-          <---------ZAT14     <---------YAB1     <---------YAB1  <-----------RAV1(1)               -- ------DOF2 ------->TEIL   <---------AGP1--------->AtLEC2    <---------YAB1           <----------DOF2   ttgtagggacactgtaccgaaaaaccctagttctgatttggccatggaagtatcatagcacttactattgtcggctttacttcttctacttttgtataat  24692700                                     <---------ANAC58                          <---------RVE1(1)                          <---------CCA1(1)                         --------->ARR11(3)                         <---------ARR11(3)          <---------TOE2(2)          <-----------RAV1(1)                                  <------ZmHOX2a(1)          <---------TOE2(3)          <---------ANAC58                              ---------->DOF2          <---------TOE1(2)   <---------AHL20(2) ----------->GT1                <---------ZAT6 ---------DOF2         ----------->ARR10         <---------MYB46(3)           <---------ANAC46      - ---->ZmHOX2a(1)<---------ANAC46     <---------ANAC46       <---------YAB1 --------->At5g28300  -----   ccttttttttcttaggttctgtgattagatattttttttgtgtgggtttagttgttaatctgatcatggatttgaacggtgagtgtaaaggaggagatgg  24692800  Previous    Next  AGI:  At5g61380.1    Description:  TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator. Identical to Two-component response regulator-like APRR1 (APRR1) [Arabidopsis Thaliana] (GB:Q9LKL2;GB:Q9M4B7); similar to APRR5 (PSEUDO-RESPONSE REGULATOR 5), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G24470.1); similar to timing of CAB expression 1 protein [Castanea sativa] (GB:AAU20772.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 24692290    to: 24695776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.