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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
TEIL
------->
TEIL
--------->
YAB1
--->
TEIL
--------------->
AtSPL8
<---------
ATHB12
---------->
DOF2
---
ATHB12
----------->
GT1
<-----------
HVH21
<---------
ATHB12
<---------
GLK1(2)
atttagcgagggtgagaaatgtcaattcaatgtacattctatgtcaattcaatgaaaacaaatgaagaaaagagacatgaaatatgtttccaaattctta
24311700
--------->
ARR11(3)
--------->
ARR14(2)
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
<---------
ARR11(3)
<---------
LBD16
--------->
ATHB12
cttagaagaattagaatcaaataatacaatatctacatatgccatgagagacatatggaaaaccatgttttcggatgataaacttccaaattgatttgat
24311800
---------
<--------
---------
--------->
TGA2(1)
--------->
KAN4(1)
<---------
bZIP60(1)
<---------
HSFB2a(1)
--------->
bZIP60(1)
<---------
KAN4(1)
<---------
TGA2(1)
--------->
HSFB2a(1)
<---------
MYB52(2)
--------->
At4g35610
<---------
--------->
MYB46(3)
--------->
SPL7
<---------
HSFC1(2)
--------->
AHL20(2)
--------->
SPL7
--------->
MYB46(3)
<---------
KAN4(2)
----------->
GT1
--------->
MYB52(1)
<---------
SPL7
--------->
ALFIN1
--------->
AHL20(2)
<-----------
GT1
------>
ZmHOX2a(2)
------->
MYC3
-
--------->
LBD16
<---------
TOE1(3)
<-----------
HVH21
<---------
At4g35610
---------->
TaMYB80
----------->
GT1
<---------
TOE2(3)
--------->
MYB52(1)
--------->
MYB52(1)
<-------
MYC3
<
atatactataaaccggcaaataaacaaattgaggttaaaatataacaaaccggtccggtctgatcgaacggctgatgtcataaaacgtggggaatattcg
24311900
------
<------
<------
-------
-------
-------
<------
-------
-------
<------
<-------
--------
--------
--------
<-------
--------
--------->
ALFIN1
--------
<------
NtERF2
------->
TEIL
--------->
MYB55(2)
--------
<---------
MYB46(3)
--------
<---------
YAB1
<---------
<---------
ANAC55(2)
<---------
ZAT18
--------->
bZIP60(2)
--------->
ETT(2)
--------->
ANAC58
----------->
HVH21
--------->
O2
--------->
ALFIN1
--------->
ZAT14
---------->
DOF2
<---------
O2
<---------
ANAC46
<---------
ZAT14
--------->
YAB1
--------->
ANAC58
--------->
SPL7
>
ARR14(2)
---------->
DOF2
--------->
ICU4
--------->
ATERF1(1)
-
ARR14(2)
<---------
ANAC58
--------->
ANAC46
---------------------
>
KAN4(2)
<-------
GAMYB
<---------
ANAC58
--------->
TGA1a
--------->
ATERF1(1)
-
TaMYB80
<-----------
HVH21
--------->
ALFIN1
--------->
ANAC55(1)
<---------
ATERF1(1)
<
-------->
AHL20(2)
----------->
GT1
=======================
bZIP_DOF
<---------
SPL7
<------
---------
AHL20(2)
<---------
MYB52(1)
<---------
ANAC46
<-----------
STF1
<---------
ANAC46
<-------
attaaaataacaaagactccgttacggtcgtaaataagtggtgtgagaaccgaaagtcaaaaacacgtcaatattggtgggggggacgaccgtgcacgtg
24312000
<---------
ALFIN1
----->
HVH21
-
MYC4
-
PIF5
>
MYC4
>
PIF5
>
MYC2
-
MYC2
>
PIF4
>
MYC3
-
MYC3
--
O2
->
O2
-
->
ANAC46
<-
->
ANAC58
<--
--
ANAC55(2)
---
->
ANAC55(2)
--------->
LBD16
<---
->
ANAC58
--------->
LBD16
<---------
LBD16
<----
->
bZIP60(2)
<---------
ANAC58
--------->
SPL7
<----
->
TGA1a
<---------
ANAC46
<---------
ARR14(2)
<---------
SPL7
<------
---
OsbHLH66
<---------
ANAC58
--------->
ARR14(2)
<-----------
HVH21
<------
NtERF2
-->
TaNAC69(2)
<---------
LBD16
--------->
LBD16
------>
NtERF2
-------->
P
<------
---------
ZAT14
--------->
LBD16
<-----------
GT1
<---------
ATERF1(1)
<--------
-
PIF4
<------
ZmHOX2a(1)
<------------
CBF
<---------
LBD16
--------->
DEAR3(1)
<---------
ANAC58
--
TGA1a
<---------
LBD16
--------->
AHL20(2)
<---------
DEAR3(1)
<---------
ANAC58
accacacaggaactaaacccggacgtattgcgcgaaaattaaaccggatttgataatcggcgactcgtccggcaacccttgttttgttttcgtctcggcg
24312100
<----------
DOF2
----->
ZmHOX2a(2)
<------------------------
ANAC81
----------->
GT1
-----
ZmHOX2a(2)
<---------
ANAC58
<---------
At4g35610
-------
ARR14(2)
<---------
ANAC58
--------->
ZAT2
------>
ARR14(2)
<-------
GAMYB
<-----------
ARR10
---
NtERF2
<---------
MYB46(3)
<---------
ANAC58
<---------
ZAT2
-----
DEAR3(2)
<------
MYB83
<---------
ANAC58
--------->
YAB1
----
-----
MYB46(3)
<------
MYB46(1)
------>
ZmHOX2a(1)
<---------
ARR11(3)
------
---
At4g35610
--------->
MYB59
<-----------
GT1
--------->
ARR11(3)
<-----
---
LBD16
*
TSS
<---------
AtMYB61
<-----------
GT1
--------->
GLK1(2)
--------->
TOE2(3)
-
DEAR3(1)
----------->
RAV1(2)
<---------
AHL20(2)
---------->
DOF2
--------->
At4g35610
<------
gatcgatttttcttc
gtctgggtttggttgtctttttattttcctcttccttggccaaagaaaatcttatcgtagctgtgaaaaccctagtttctaatca
24312200
<---------
ANAC46
<---------
ANAC58
--------->
ARR14(2)
<---------
ARR11(3)
----->
At4g35610
<---------
YAB1
--------->
GLK1(2)
---------->
DOF2
-
--->
YAB1
<---------
ATHB12
<---------
ARR14(2)
<---------
MYB52(1)
<---------
ANAC58
----
ICU4
------>
MYB46(1)
<---------
ANAC55(2)
<---------
ANAC46
--------->
ARR11(3)
---
ATHB12
------>
MYB83
--------->
ANAC55(2)
<-----------
GT1
<----------
DOF2
<---
tctcaattctctcattaacctatcaatttcgatagggtttgatcaagtatccgatttcatg
gtttgtattttccgtttaatagtctttaaaggtcttgtc
24312300
<----
<----
<----
--------->
At4g35610
<-----
<---------
MYB46(3)
--------->
MYB59
<--------
P
<---------
TOE1(3)
------>
ZmHOX2a(1)
<---------
MYB46(3)
<---------
ANAC58
<---------
ANAC58
<---------
MYB52(1)
<----------
DOF2
<---------
ANAC58
-------->
HSFB2a(2)
================================
HOX2a_HOX2a
<---------
WOX13(1)
<-
-------
DOF2
<---------
ANAC58
<----------
DOF2
------>
ZmHOX2a(2)
<---------
ICU4
<---------
TOE2(3)
ttttggaatttcaagggttttcgtttcagtaactccttcttttttttctgttaatttag
atcggttgctgtatggagactaattgctggagtttaggttc
24312400
<
------>
ZmHOX2a(2)
-------->
ATHB1
--------->
CCA1(2)
--------->
ATHB51
<
<---------
YAB1
<------
ZmHOX2a(2)
-----
ANAC58
----------->
GT1
<---------
AGP1
-----
ANAC58
<---------
ANAC46
--------->
YAB1
--------->
AGP1
-----
ANAC46
<---------
ANAC58
<---------
At4g35610
<---------
ARR11(3)
--
TEIL
<----------
DOF2
<---------
ANAC46
<---------
ARR14(2)
--------->
MYB59
---------->
DOF2
<
--------
TOE1(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
TOE2(3)
--------->
ARR11(3)
gtgtgttttgaactgagcttttggttcttgtttgtgtctggtgttgaagac
atggatttggaagctaattgtaag
gtattattgtctgaaagatctatgg
24312500
<---------
AHL20(2)
<---------
YAB1
<------
MYB83
<------
MYB83
<------
MYB46(1)
<-------
<------
MYB46(1)
<---------
WOX13(1)
<---------
ANAC58
<---------
MYB46(3)
<---------
MYB46(3)
<---------
DAG2
<--------
P
<---------
YAB1
--------->
ATHB12
<----------
DOF2
<---------
MYB46(3)
<---------
YAB1
<---------
ANAC58
---------
ANAC46
--------->
ALFIN1
--------->
ALFIN1
<---------
ANAC58
---------
ANAC58
<---------
YAB1
----------->
GT1
---------->
DOF2
<---------
ANAC58
---------
ANAC58
--------->
ATHB12
------->
TEIL
<---------
ANAC46
<----------
DOF2
atgcttgttggtttataatttttgttgatttgaacttgttatgaatgtgttgattggtatatagagtggatgtttcaaaaaagctttgcttttccgtttt
24312600
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AGI:
At5g60410.1
Description:
ATSIZ1/SIZ1; DNA binding / SUMO ligase. Identical to E3 SUMO-protein ligase SIZ1 (SIZ1) [Arabidopsis Thaliana] (GB:Q680Q4;GB:Q56YS2;GB:Q56ZS1;GB:Q67ZL3;GB:Q9FKK4); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G41580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21812.1); similar to DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABD33066.1); similar to hypothetical protein OsJ_016201 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32718.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type;
Range:
from: 24312116
to: 24318373
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.