Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------->TEIL     <---------TOE2(3)           --------->ZAT2    --------->YAB1     --------->ANAC58                                                         -----  <---------YAB1       --------->ANAC46                                                         <---- --->MYB46(1)          --------->ANAC58                                                         <---- --->MYB83   ------>MYB83       --------->ANAC58                    --------->At5g28300    <--------- -------->RAV1(1)   <---------ATHB12                             <---------At5g28300   <---------ALFIN1 ----->ANAC46------>MYB46(1)    --------->ANAC58      <---------ANAC58               <---------ALFIN1 ---->MYB46(3)<-----------ARR10 --------->ANAC46      <---------ANAC58           --------->At5g28300   caccattaatgaaccaaatctaatcacacaatacaagctccgattttgtaatgtaagcgtgagaaatcacagtgactagtgactgtaacacacctttgag  24090100                                                          ----------->GT1                                                     ----------->ARR10                                                  <-----------HVH21                        <---------WOX13(1)       --------->LBD16                       <---------ARR14(2)      ------>ZmHOX2a(2)                  --------->MYB52(1)           <---------LBD16     --------->GLK1(1) --------->ARR14(2)    <---------ARR14(2) ---->ZAT2--------->ANAC46                   --------->ARR14(2)                              <------- -----At4g35610  ----------->HVH21   --------->MYB52(1) <------ZmHOX2a(2)              --------->ANAC46 -----ZAT2--------->ANAC58<------MYB83 --------->MYB46(3)------>ZmHOX2a(2)             --------->ANAC58 -DOF2    --------->ANAC58<------MYB46(1)  ----------->HVH21                           --------->ANAC58   ctcggagatttcaagctagacgacggattggtaagagtacaacggctgatccggtgagatcggagaaaaattgtctctgtctctctctcacgctcctttt  24090200                                            --------->MYB46(3)                                  <---------ARR14(2)                               =============================HOX2a_HOX2a                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                                         <---------TOE1(3)              ------>NtERF2   ====================HOX2a_HOX2a                     <---------DAG2              <---------ATERF1(1) --------->ARR14(2)   <----------DOF2            <----------DOF2             --------->DEAR3(1)===================HOX2a_HOX2a                    *TSS  ---------->DOF2           --------->LBD16   <---------ARR14(2)      ------>ZmHOX2a(1)        ------>NtERF2        ==           <---------ATERF1(1)==============================HOX2a_HOX2a       --------->LBD16     <--           ------>NtERF2  <---------HSFB2a(2)    --------->ORA47(1)       <-----------GT1         ---          <---------DEAR3(1) --------->ARR14(2) --------->DEAR3(1)    <---------MYB52(1)<---------TOE2(3)     <---------MYB52(1)   --------->HSFB2a(2)<---------ALFIN1        <----------DOF2<-----------TBP<- ---DOF2 <---------LBD16----------->RAV1(2)------>ZmHOX2a(1)        --------->TOE2(3)  ==============   gtaaaccgttctccggcgacttctccgtctggatccgatttgctcctccaccgtcctctttctctcaattcctttatttccgccctttttaaagttgtgt  24090300                             --------->At4g35610                             ------------>CBF                            --------->ANAC58                            --------->ANAC58                          --------->TGA2(2)                         <-----------HVH21                         <-----------TGA1                        ==========================bZIP_DOF                        ==========================bZIP_DOF                        --------->O2                        <---------TGA1a                        --------->ANAC46                        --------->ANAC58                        --------->bZIP60(1)                        <---------bZIP60(1)                        <---------O2                        --------->ANAC58                        --------->bZIP60(2)                                      --------->ANAC55(2)   <---------TOE2(3)    <<<<<<<<<<AtbZIP1                                  <---------ANAC46 =================================MYC_MYB                               <---------ARR14(2) -------MYB46(3)        --------->TGA1a---------->DOF2                 <---------GLK1(1) ------>MYB52(2)       <-----------bZIP910(1)                   <-----------RAV1(2)             ----- ------GAMYB       --------->ANAC46<----------ID1       ---------->DOF2--------->GLK1(1) --------->ARR11(3) =================================bZIP_DOF----------->GT1   <------ZmHOX2a(1)<---------MYB52(1) <----   tcgttgatgttttccaagtataggccacgtcagcaataagacaaaggtcaaaaccttctaaaggacccagagggtttccgtttatgtgatagttcttcat  24090400                                                                                                    -                                                        ----------->GT1                             -       <-----------RAV1(1)                    <----------ID1                                      ---       --------->ALFIN1                    ----------->TGA1                                       ---      <-------MYC3                      <---------TOE2(1)                                         ---      ------->MYC3                      <---------TOE1(1)                                ---------->ID1 ---->ICU4                         <---------------AtSPL8        --------->TOE2(3)       <-----------GT1 -----YAB1                   <---------MYB52(1)    ---------->DOF2------>ZmHOX2a(1)     <-----------GT1   gatcaacatgtgtggcccatgagaaacaccagttaagttagtacgatgacgacgaaagaagataaatcctaaactcgtggtcgtgatttttttcccttcc  24090500                                                                                           --------->ZAT2                                                                                       --------->SPL7                                                                                     --------->TOE2(2)                                                                                     --------->TOE1(2)                                                                                   --------------->AtSPL3 *TSS                                                                             --------->ARR14(2) -------->TOE1(3)                                                          --------->At4g35610 -------->TOE2(3)                           <---------ANAC46            ---------->DOF2<---------TOE1(2) --->MYB46(1)                     <---------GLK1(2)                --------->CCA1(2) <---------SPL7<- --->MYB83                        --------->ARR11(3)              <----------ID1  --------->GLK1(2)-- ----->P                          <---------ARR14(2)          ---------->DOF2     <---------ARR14(2)-   aaccttaaaaatatgtctgaaattttaaaattttcagattttggttttgtgttgagaacaactccaaagagacgagaagcagcgaatcgtacgagcagag  24090600                                                            ----------->HVH21                                                          <---------At4g35610                                                    <----------DOF2           <---------ANAC58                                                 --------->ARR14(2)           <---------ANAC46                                                 <---------ARR11(1)           <---------ANAC58                                 <---------DAG2  --------->GLK1(2)     <---------YAB1                          --------->ARR14(2)     ------->TEIL    --------->At4g35610              <---------ANAC46   <----------DOF2 <---------ARR14(2)  --------->REM1(1) --------ARR11(3)         <---------ARR14(2)    <---------CCA1(2)<---------At4g35610          <------ ------->ARR11(3)         <---------GLK1(2)     <---------ARR14(1)  <-------TEIL              <------ -------->CCA1(2)      <---------WOX13(1)    ------>ZmHOX2a(1)   --------->ZAT2              ------>ZmHOX2a(1)   agatatatgtttcattacgtcgatgatggattctgctttatatcatcctcgaatctttttcgctcacagcttcatcaatggcttgtatagttctcctagg  24090700                                                                                                    -                                                                                                    -                                                                                             --------                      <--------P                                                           <---------MYB52(1)                      <---------MYB52(1)                                                 ------>ZmHOX2a(1)                    <---------MYB46(3)                            ==============================HOX2a_HOX2a                    <------MYB83                                  ------>ZmHOX2a(2)  <---------ARR14(2)       <---------ANAC58                                           ===================================       <---------ANAC58 --------->MYB52(2)           <---------ZAT6                  --------->ARR11(3)      <---------ICU4<------MYB46(1)        <------ZmHOX2a(2)  <---------ZAT6         --------->GLK1(2) ---TOE1(2)<---------ANAC58               --------->ARR11(3)--------->YAB1           --------->ARR14(2) ---TOE2(2)<---------ANAC58              --------->GLK1(1)<---------ZAT14        --------->YAB1<-----   tttgctaatacttgctggagattggttagtcgttcaagttgggagatcaaggctagtgagaatagtgatcgcaatgtgttcgatgaaaatcctgttagga  24090800           <---------MYB52(1)          <-------GAMYB         --------->MYB52(2)     <---------MYB46(3)    --------->O2                                      --------->ANAC58    --------->TGA1a                                   --------->ANAC58    ==============MYC_MYB                        <---------GLK1(1)    ==============MYC_MYB                        --------->GLK1(1)    <---------O2                              --------->LBD16    <---------TGA1a                          --------->ANAC58  --------->MYB52(1)                         --------->ANAC58 ----------->HVH21                          <---------LBD16 --------->DEAR3(1)                     --------->WRKY12----------->RAV1(2) -------->MYB46(3)                      ----------->HVH21                                         === -------->DEAR3(2)                    <-------GAMYB   --------->ANAC46                            === ->MYB59 <---------MYB46(3)           <---------At4g35610           --------->ATHB12 <---------ANAC46 =HOX2a_HOX2a                         --------->At4g35610           <---------ICU4----------->TGA1--- -ZmHOX2a(1)           <---------At4g35610 <---------ANAC46        <---------YAB1 ----------->HVH21   aaaccgacgggtcgttgtttgattctgcttcgtttgagacagttgacgcggaaatcacgcctgagactgatgatttcttcgtgagtgacgcagagggtga  24090900               <---------TOE2(3)         ------>ZmHOX2a(1)                                    --------->DAG2  --------->ARR14(2)                                   ---------->DOF2                              -  <---------GLK1(2)      ------>ZmHOX2a(1)          --------->ANAC58                                <  <---------ARR14(2)--------->KAN4(2)               --------->ANAC58        <---------TOE2(3)      <- ===============================HOX2a_HOX2a         --------->ANAC46      ----------->HVH21        -- ===============HOX2a_HOX2a                    <---------ARR11(3)       <----------DOF2         <---- --->ZmHOX2a(2)<---------TOE1(3)               <-----------ARR10   <---------MYB46(3)         -------   tccagattgtcctactcaaggttattcctctattgaacttgctcttcaagctctacgcaaaggaaaggtttgttctttgacgattttcttgaagaccagt  24091000  Previous    Next  AGI:  At5g59740.1    Description:  UDP-galactose/UDP-glucose transporter-related. similar to ATUTR5/UTR5 (UDP-GALACTOSE TRANSPORTER 5), galactose transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G46180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21724.1); contains InterPro domain UAA transporter (InterPro:IPR013657) Range:  from: 24087277    to: 24090281    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g59750.1    Description:  riboflavin biosynthesis protein, putative. similar to ATGCH (ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II), 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II [Arabidopsis thaliana] (TAIR:AT5G64300.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72560.1); similar to hypothetical protein OsI_019555 [Oryza sativa (indica cultivar-group)] (GB:EAY98322.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21723.1); contains InterPro domain 3,4-Dihydroxy-2-butanone 4-phosphate synthase; (InterPro:IPR000422); contains InterPro do Range:  from: 24090501    to: 24092768    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.