Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->At4g35610                                      --------->YAB1     <---------At4g35610                                     <---------AHL20(2)  <---------ZAT2                                    --------->AHL20(2) <---------DEAR3(1)                               --------------->AGL15  --------->SPL7     <---------At4g35610     ------->TEIL             --------->RAP2.6(3)     --------->At4g35610    <-----------GT1          --------->MYB52(1) -----YAB1               <---------------AtSPL8     <---------SPL7                                <-- ---ICU4                 --------------->AtSPL8  --------->MYB52(1)                               <-- --HAHB4             <---------ARR11(3)      ==================================HOX2a_HOX2a       ---- -->ATHB51           --------->ARR11(3)      <------ZmHOX2a(2)           <---------TOE1(2)      <---- ->ICU4              --------->AHL20(1)     --------->ARR11(3)           <---------TOE2(2)     <----- --YAB1              <---------AHL20(1)     <---------ARR11(3)          ------>ZmHOX2a(1)      <-----   taatctcagcccaaaacataaaaaatatttgtaccctatataataagatcgaaacggacggctgagattgcatcctatgttttgcagttttttgagtcgg  23918400                                           <---------YAB1     ----------->GT1                                     <---------AHL20(2)       --------->ANAC55(2)                                     <---------AHL20(1)       <---------ANAC55(2)           --------->DAG2      --------->ANAC55(1)         --------->ARR14(2)    --------->ARR14(2)         <---------ANAC55(2)         <---------ARR14(2)    --------->GLK1(2)          --------->ANAC58            <---------GLK1(2)    <---------ARR14(2)         --------->ANAC46            --------->ARR11(1)            <-----------GT1 -------WRKY38(1)              ----------->GT1        ----------->GT1      <---------ANAC58 -------WRKY12                 --------->ANAC58 --------->REM1(2)      --------->At4g35610 ----->WRKY18(1)    --------->DAG2   --------->AHL20(1)  ----------->ARR10 <---------ANAC58    <----- -------HVH21     ---------->DOF2    --------->AHL20(2) <--------P <---------MYB52(2)<----------DOF2 -MYB83 --------->LBD16 <----------DOF2    <---------TOE2(3) <-------TEIL  <---------ANAC46<---------ANAC46 -MYB46(1)---------->DOF2      --------->ANAC55(2)  <---------ANAC46   <---------At4g35610<---------LBD16   tcatcgaatccgaaaagcggaaaaggctttctcacgtaataaattaagcttgtagagggtagattcgtaactaagcagcgtgttttccttttttcgggtt  23918500                                   <---------ANAC46                                 --------->ARR14(2)                               --------->LBD16                        <---------YAB1                 ------------>CBF<-----------HVH21              --------->MYB46(3) <---------ARR14(2)             ---------->DOF2  <---------ANAC58                         <----------DOF2          --------->LBD16     <---------ANAC58                       <------NtERF2         <---------HSFB2a(2)  <---------ANAC46                ---------->DOF2         <----------DOF2         --------->HSFB2a(2) <---------LBD16               ----------->GT1     <-----------GT1 <---------ARR14(2)     <---------AHL20(2)            <---------AHL20(2)     <-----------HVH21    <<< --------->GLK1(2)     --------->AHL20(2)           ----------->TBP<---------ZAT18 --------->ANAC46 --------->ARR14(2)    <---------AHL20(2)      --------->TOE2(3)   --------->ZAT18--------->MYB46(3) ---P --------->PCF2  --------->YAB1 ----------->GT1<---------------AGL15 <----------DOF2       <----   gagaatcggacccagaacagccaattttaattccgggtcgggttataaacctctatatatatggtaaagcccgcttctttgtcacccgcttcacgatttc  23918600                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->YAB1                                                                   --------->ICU4                                                                 >>>>>>>>>GT-2                                                               --------->At5g28300                                                              ----------->GT1                    ----                                                           --------->MYB52(1)            <---------TOE1(3)                                                          <---------SPL7            --------->WOX13(1)                                ---------->DOF2        ------>ZmHOX2a(1)           --------->AHL20(2)       ---------->ID1  <---------ATHB12               --------->TOE1(2)           <---------ATHB12 <<<<<<<<<TBF1     ------------>CBF       <----------DOF2----------->HVH21      --------->WOX13(1) <<<<<<TBF1    ---------->ARF1 <---------ATHB12      ----------->RAV1(2) <-----------GT1 <---------TOE2(3) --------------------ANAC81------------>CBF ------------>CBF--------->SPL7    ------------>CBF   ----   ttcttcttcgtcgtcttctctcccaatcgtccaattaagctctgctttcaatttctcctgcgaacggtaattatataactctcaatcaattagggtttca  23918700                ==================bZIP_DOF                <---------bZIP60(1)                          <----------DOF2                --------->bZIP60(1)                   <------MYB46(1)        <---------ALFIN1   <---------ANAC46    ------------>CBF                            ------->GAMYB       --------->LBD16 <----------DOF2<-----------TBP <------MYB83                        --------->MYB46(3) ----->ANAC58   --------->ANAC46  ----------->GT1    --------->MYB59----------->GT1   <---------YAB1 ----->ANAC58   --------->TGA1a <------------CBF     <---------TOE2(3)           <---------ZAT6  ----   aggaaaacccccaaactcacatcacctttgagtgaattgtatttatactctcaattaggttttctttgaatcgtatcaagatggtgttatcaacgagcga  23918800                                --------->DOF5.7(2)         --------->ETT(2)                              --------->bZIP60(1)           <---------ETT(2)                              <---------bZIP60(1)          ---------->ARF1                             ----------->STF1          ------>ZmHOX2a(2)                            <---------TGA2(2)         <------ZmHOX2a(2)              <---------ZAT14                           ----------->TGA1          --------->ARR11(3)--------->ARR11(3) ----->CCA1(2)             ----------->HVH21         <---------ARR11(3)<---------ARR11(3)   tacgagtagctcttacaactatgttatcgatgacgttatcaacaagtctcgatgcgatcttgtctacaatggagaacttgatgagagtgttcttagccaa  23918900                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                           <------ZmHOX2a(1)         --------->ATHB12                                  <---------TOE1(3)    <------ZmHOX2a(1)         --------->MYB52(2)       <---------TOE2(3) <---------At4g35610<---------WOX13(1)       <---------MYB52(1)      <<<<<<<<<MYB98<---------YAB1   --------->HSFB2a(2)<----------DOF2       <--------P      <----------DOF2   <---------TOE2(3)    <---------HSFB2a(2)<---------DAG2   attcaatcggttagtttgttaactcctttgtaagttagggttttaggatgattcagaggattttctgaaactgattgaaaaaactttatgtctatagatg  23919000                                                                                   <---------ZAT18                                                                                   --------->ZAT18                                               <---------ARR11(3)       ----------->RAV1(2)                                               --------->ARR11(3)       <---------TGA1a                                             <---------HSFC1(2)         --------->TGA1a                      <------ZmHOX2a(1)      --------->HSFC1(2)       <---------ALFIN1                     --------->At4g35610 --------->YAB1             --------->AtMYB61                 --------->ANAC58    --------->MYB46(3)             <---------ALFIN1                 --------->ANAC46    --------->KAN4(1)             --------->MYB46(3) <---------At4g35610                 --------->ANAC58    <---------HSFB2a(1)           --------->ANAC46--------->ZAT14             --------->CCA1(2)      <---------KAN4(2)            --------->ANAC46  <---------ZAT14          <---------YAB1       --------->At4g35610    <---------At4g35610   ----------->HVH21   tggaaaacgaagatgatacaagcaggagccatgagcggaacaatcgaaacatcttctgcttcgattcccaccacacctgtgatagtgcagacgactcttc  23919100                                                                        --------->TOE2(3)                                                                  <---------AHL20(1)                                                                  <---------AHL20(2)                                                                  --------->AHL20(1)                                <---------ARR11(3)               --------->AHL20(2)                             <---------------------WRI1          --------->YAB1                     --------->TOE2(2)                          <---------YAB1                   ----                <----------DOF2 --------->ARR11(3)           --------->AHL20(2)               <------    --------->LBD16  --------->TOE1(2)      ---------->DOF2  <---------AHL20(2)             ---------  <---------LBD16   ----------->RAV1(2) ---------->DOF2<---------WOX13(1)------>ZmHOX2a(1)  ---------   agactccggatgcaattcctttacctgagaagaagatgtctccaaagaaagagagtgatggattttattatattcctcagcaagatggagcgagagatga  23919200                                                       <------ZmHOX2a(1)                                                <---------YAB1             <---------YAB1                                                --------->ICU4           --------->YAB1                                              --------->YAB1            --------->ICU4 --->TEIL                                    --------->ICU4             <---------YAB1 ---REM1(1)                                  <---------YAB1           --------->YAB1             <--- >CCA1(2)<---------REM1(1)                 --------->YAB1     --------->ARR11(3)   ------->TEIL <---- >At4g35610                             <------ZmHOX2a(1) <---------At4g35610 --------->CCA1(2) <----   agctattgtcgatgtagatgagaatgaagagcctttgaacgaggatgatgatgatgaggaagatgatatcgatgatgatgatatgaacattcaacatttg  23919300  Previous    Next  AGI:  At5g59230.1    Description:  transcription factor-related. similar to transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) [Arabidopsis thaliana] (TAIR:AT1G07480.2); similar to transcription factor IIA large subunit, putative / TFIIA large subunit, putative [Arabidopsis thaliana] (TAIR:AT1G07470.1); similar to transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) [Arabidopsis thaliana] (TAIR:AT1G07480.1); similar to Os05g0292200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055101.1); similar to hypothetical protein OsJ_017149 [Oryza sativa (japonica cultivar-group)] (GB:EAZ33666.1); contains InterPro domain Transcription factor II Range:  from: 23918781    to: 23919605    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.