Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->AHL20(2)                                                  --------->TOE1(3)                                                  --------->TOE2(3)                                                <---------ARR11(3)                                        --------->At4g35610   <---------AHL20(2)                                        <---------At4g35610   --------->AHL20(2)              -------     --------->ARR14(2)      ----------->GT1    --------->GLK1(2)              --------->At4g35610 --     <---------ARR14(2)     ----------->GT1     --------->ARR11(3)   <-----------GT1       <------ZmHOX2a(1)    <---------GLK1(1)   <---------HSFB2a(2)    --------->RVE1(1)<---------AHL20(2)--------->At4g35610   tgaaacaaatccgactcattcacattccataagttaaattccagcttaaaaatcttaaatctatatatatataactggataagcagaagagaaggagaaa  23659700                                                                              --------->ANAC55(2)  --------->CCA1(2)                                                       <----------DOF2 <---------ARR14(2)                                                      --------->TOE2(3) --------->ARR14(2)                                          --------->ZAT2   <---------TOE2(3) <---------ARR11(3)                                          --------->At4g35610 <---------GLK1(2)                                           <---------ZAT2  <---------LBD16--------- --------->ARR11(3)                              <-----------HVH21  --------->At4g35610     <-------- --->DOF2                           --------->MYB52(1)  ------->TEIL<---------At4g35610 ---------->DOF2 --------->ARR10            <-------GAMYB ----------->HVH21  <---------At4g35610   <-------TEIL   gaagatactcgattcgaactctgtttccaccgttgaagtaacgagtgacattgtcatgtacccagctctctgctacctttacggatgcattcaagctctt  23659800                                                                         <------NtERF2                             <---------------AGL15                    <------NtERF2                             --------------->AGL15                   <---------DEAR3(2)                            ----------------->AGL2                  <---------DEAR3(1)                            <-----------------AGL3          <----------DOF2                         <                            ----------------->AGL3       <---------ARR11(3)    <---------ARR11(3) <--                          <---------bZIP60(1)            --------->ARR11(3)    --------->ARR11(3) <-- >ARR11(3)         <---------MYB52(1)            --------->ZAT2     --------->ETT(1)              <-- -ARR11(3)       <---------YAB1                  <---------ZAT2    --------->RAP2.6(3) <----------DOF2   gagcatcgaattttggattccgatagtgacaccaatattagaaccagagagagctcggagaacttttgggtcggcatcgaagagcttcactttgacaatg  23659900                                                                                               ======                                                                                               ------                                                                                       --------->KAN4(2)           <---------GLK1(2)                                                        <-------GAMYB          <---------At4g35610                         <-----------HVH21             =================        <---------HSFB2a(2)                     --------->HSFB2a(1)                <---------MYB46(3)     <---------GLK1(1)                      ----------->HVH21              --------->ZAT14    ------- ---------MYB52(1)                         --------->SPL7   <---------ALFIN1   ----------->HVH21 -------ANAC58                    <------NtERF2 --------->HSFC1(2)      <---------ZAT2<---------MYB46(3) -------ANAC46                 <---------LBD16  <---------HSFC1(2)      <---------At4g35610  <------- -------ANAC58         --------->TOE2(3)  --------->ALFIN1 --------->LBD16 <---------ZAT14  ---------   ccgtttgatttcagaagctctacaacctttgaaggcggaagagggtgcgacgcttctgtcccccaatttatgccaactgctctgacggttgttcccgtca  23660000                    --------->ALFIN1                 <------NtERF2                <---------RAP2.3(1)                ------>NtERF2               <---------RAP2.3(3)               --------->ATERF1(2)               <---------ANAC46               <---------RAP2.6(2)               <---------DEAR3(1)              --------->RAP2.6(3)             --------->REM1(2)            ----------->TGA1            ----------->HVH21           <-----------HVH21                                                        <---------ANAC58          --------->O2                ----------->HVH21                          <-----------RAV1(1)          <---------ANAC58            --------->DEAR3(1)                       <---------ICU4          <---------ANAC58            ------->GAMYB                 --------->SPL7  --------->ETT(1)          <---------TGA1a            --------->DEAR3(2)          --------->TOE1(1)  <---------ANAC58          --------->TGA1a<------ZmHOX2a(1) --------->ANAC58      --------->TOE2(1)<-----------HVH21          <---------ANAC46          <---------At4g35610         --------------->AtSPL3  <---------ALFIN1<---------ANAC46  --------->At4g35610         --------------->AtSPL8 ===================bZIP_DOF<------ZmHOX2a(1)                   <---------------AtSPL3 ---->DOF2<---------O2 --------->ALFIN1 <------NtERF2        ------->TEIL  --------->ANAC58 ===================MYC_MYB----------->GT1 --------->ANAC58  <---------ARR14(2)*TSS--------->ALFIN1 -->WRKY18(1)--------->MYB52(1)   --------->MYB46(3)<---------ARR14(2)     --------->ANAC58 ----HVH21====================================MYC_MYB   ----------->GT1    --------->ANAC46      ---- >ANAC46------>NtERF2 <------ZmHOX2a(1)------>NtERF2--------->ARR14(2)    --------->LBD16 <------NtERF2   agctcaaccctgccgtgacggcgaggaggaggagaaacagccgacgagccatcaaatccagtgaatctcgtacttccacgataatgtcgggccgagaaat  23660100                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC46                                 <-----------GT1                      --------->ANAC46                            <---------ANAC58                          --------->ANAC58                            <---------ANAC58         <---------MYB52(1)                       <---------ANAC46      --------->At4g35610      <----------ID1         <-------                       <---------ANAC58    <---------GLK1(2)<---------At4g35610              <-------          <----------ID1    <---------ANAC46 <---------At4g35610      --------->ANAC58 <------------CBF -------->CBF          <---------ANAC58   <---------At4g35610    --------->YAB1<---------MYB46(3)   tcaatgtttaaaaaaacaaaacactgcgtgccgtttcacgactcagcatctcactgttatttagctatcaaaacgacacggtgtttagaaattgggcttg  23660200                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                               ------                                                                                               <-----                                                                                             --------                     <---------ICU4                                                         ---------                  <---------ICU4                                                       <---------YAB1                  --------->YAB1                                                      --------->TOE2(3)                 <---------YAB1                                                      --------->YAB1               <---------ICU4                                                        <---------ICU4               --------->YAB1               *TSS                                  --------->WOX13(1) --ANAC58     <---------ATHB12           --------->At4g35610            --------->At4g35610 --------- --ANAC58     --------->ICU4     ----------->GT1                     ---------->DOF2<---------ATHB12   ggcttcacattccctaatcatcatcatctctgaaatagaaattatctgaaacttagagagacagagagagagaaagctcaaattcaatcatcaatgttaa  23660300                                   <---------MYB46(3)                              --------->ATERF1(1)                              <------NtERF2                             ------>NtERF2                                      <---------ATERF1(1)                             ----------->RAV1(1)                               --------->ARR14(2)                            --------->RAP2.3(2)                                <---------ARR14(2)                            --------->RAP2.3(3)                               <------NtERF2       ---                            --------->DEAR3(1)                                -----------------------                           --------->ERF1                                   <---------DEAR3(1)    ---                           --------->ATERF1(1)                             --------->LBD16     ------                           --------->RAP2.3(1)              <-----------HVH21<---------ATERF1(1)<----                           --------->RRTF1(1)              --------->WOX13(1)------>NtERF2    <------                          <---------ATERF1(1)          <------MYB83        <---------LBD16  ------>NtERF2                         <---------DEAR3(1)            <------MYB46(1)     ------>NtERF2   --------->ANAC58 ---->GAMYB              --------->DEAR3(1)           <---------MYB46(3)   <---------At4g35610------- -------SPL7            <---------LBD16              <---------ANAC58    <---------LBD16   --------->ANAC58 ----->MYB46(3)         <---------At4g35610          <---------ANAC58   ------>ZmHOX2a(1)  --------->bZIP60(2) --->MYB52(1)           --------->DEAR3(2)       ------->PIF5          <---------ALFIN1    --------->O2 ----DOF5.7(2)          --------->At4g35610      <-------PIF5       <---------ALFIN1       --------->ANAC46 ->DOF5.7(2)            --------->ATERF1(1)     <---------TGA1a <---------At4g35610      <---------ALFIN1 >YAB1               ----------->HVH21    <---------At4g35610   --------->At4g35610     <---------WRKY12 >TOE2(3)           <-----------HVH21  <------NtERF2 <---------ANAC46------>ZmHOX2a(1)<-----------HVH21   cggacgagagagaagtagtctgtgtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggctactccgtccacgccac  23660400       --------->TOE2(2) ------>At5g28300 >TaNAC69(2)    --------->YAB1 ------>LBD16   <---------ICU4 >NtERF2   --------->LBD16                                                                     <----- --NtERF2 --------->ANAC46  <-----------GT1                        <---------ICU4           <-------- ---ALFIN1--------->ANAC55(2)                                     ------>ZmHOX2a(1)  <-----------RAV1(1) -->DEAR3(1)<---------MYB52(1)                           <-----------HVH21           --------->ALFIN1   cgtgaaaaacctccgtaatcttcacaaatttctctcttcgattacgcttctggttaccctatcacctcctaattcccttacatttctgtgttgcagagga  23660500                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <---------RAP2.3(1)                                                                                           <---------At4g35610                                                                                  ------>NtERF2                                  --------->At4g35610                    --------->REM1(1) <---------ATERF1(1)                       <---------ARR14(3)  --------->ANAC58            ------>ZmHOX2a(1)   ------>NtERF2                 <---------HSFC1(1)        --------->ANAC55(1)     ------>ZmHOX2a(2)       --------->At4g35610                 --------->HSFC1(1)        --------->ANAC46       <---------GLK1(1)        --------->LBD16                 <---------HSFB2a(2)   <---------ALFIN1           --------->GLK1(1)       --------->ANAC46              --------->ARR11(3)  <-------TEIL                   --------->ARR14(2)      <---------LBD16        --------->ANAC58  <---------HSFB2a(2)                    ------->TEIL --------->ANAC46 <-----        --------->ANAC58  --------->HSFB2a(2)                    <---------ARR14(2)    <---------ARR14(2)      --------->CCA1(2)<---------ARR11(3)  --------->ANAC58      <---------AGP1  <---------ALFIN1     <----------ID1    --------->ARR11(3)<---------ALFIN1        --------->ARR11(3)    --------->ARR14(2) ---------->DOF2 --------->HSFB2a(2) ------>NtERF2        --------->HSFB2a(2) --------->ANAC58------>NtERF2 -ZmHOX2a(1)--------->HSFC1(2)   --------->ALFIN1         <---------HSFB2a(2) --------->ANAC58<------ -At4g35610 <---------HSFC1(2)<---------TOE1(2)------>NtERF2     <---------ARR11(3)   <---------MYB52(1)   tgagaaagagacgaaacatctagaaggtctcgaaggtgcagccacacgcctccatctattcgagatggatctcctacaatacgacaccgtttccgccgcc  23660600  Previous    Next  AGI:  At5g58480.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 9 precursor [Arabidopsis Thaliana] (GB:Q9FGH4); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G17180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41173.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 23658368    to: 23660079    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58490.1    Description:  cinnamoyl-CoA reductase family. similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G02400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21401.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 23660244    to: 23661824    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.