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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                               --------->ANAC58
                                                               --------->ANAC58
                                                               --------->ANAC46
                                                   <----------DOF2    --------->ANAC46
                                    ------>ZmHOX2a(2)     --------->At4g35610
                            <---------YAB1        <---------ANAC58    --------->ANAC58
                          <---------ZAT6          <---------ANAC58    --------->ANAC58
                    <---------TOE2(3)<----------DOF2      <---------ZAT2
-->ANAC58           >>>>>>>>>MYB98<---------ARR11(3)      <---------At4g35610
-->ANAC58          <-----------GT1--------->ARR11(3)      --------->ZAT2 ---------->DOF2          <-
 
aaggagtatcgctagacctatttaacatagtcttattgatctttgtttctattgcttttgcagctcaagaaacacacaaagagggcatcatacatttatt  23235000
                                                                     --------->YAB1
                                                                     <---------ICU4
                                                                    --------->ICU4
                    --------->YAB1                                  <---------YAB1
                --------->AHL20(2)  <---------AHL20(2)            --------->YAB1                   -
               --------->AHL20(2)   --------->AHL20(2)           <---------YAB1                  <--
      --------->At4g35610       --------->AHL20(2)               --------->AHL20(2)             ----
   --------->At4g35610   --------->ANAC58                    --------->AHL20(2)                 <---
   <---------At4g35610   --------->ANAC58            <---------GLK1(2)  <-----------GT1       ------
   <---------ZAT2  <---------AHL20(2)           --------->YAB1   <---------AHL20(2)          <------
---------DOF2  <---------AHL20(2)   --------->AHL20(1)     <----------DOF2           --------->GLK1(2)
 
cctttgagctgcttacaaataaataatcaagcacataaattttttgaaaaatcatatattctctttatataattataacatattcaagtttctgttttga  23235100
     <---------RVE1(1)
   ==================================HOX2a_HOX2a
   <------ZmHOX2a(1)
--------->YAB1                                                                                 <----
-------->ICU4                                                       ------>ZmHOX2a(1)      <--------
-------ICU4                       --------->ANAC55(2)             ----------->RAV1(2)     <---------ANAC46
----->ICU4                    ------>ZmHOX2a(2)                <----------DOF2            <---------ANAC58
------YAB1                  <---------ARR11(3)             <----------DOF2                <---------ANAC58
--->YAB1                    --------->ARR11(3)          --------->GLK1(2)              <---------WOX13(1)
---YAB1<---------AHL20(2) <---------YAB1               <---------GLK1(2)       --------->GLK1(2)  <-
 
taattaggatttttttgtttgtttgttttatgatctcacataatatgtctggctgtaagattctttctttcctggccttgaaattctctaattgctttta  23235200
                                    --------->YAB1
                       <---------ARR11(3)
                       --------->ARR11(3)
                     <---------AHL20(2)
                    --------->AHL20(2)
         --------->MYB46(3)<---------CCA1(2)
-----TOE2(3) ----------->GT1   <----------DOF2             --------->ETT(2)     --------->TOE2(3)  -
--DOF2  >>>>>>>>>>>>>>>>>LFY <---------YAB1    <---------YAB1        <---------ICU4   <---------DAG2
--------AHL20(2)    <---------AHL20(2)         <---------AHL20(2)    --------->YAB1   <----------DOF2
 
tgttattgaagaaccaatgtaaattaaatcttatctttatcatgtgttatattattctatggtcgtcagtaatcttcactaatccataactttatttctc  23235300
        --------->YAB1      --------->AHL20(2)
       <---------YAB1       <---------AHL20(2)                                                  ----
   <---------DAG2<---------DAG2                                                           --------->GLK1(2)
   <----------DOF2     ---------->ID1      ----------->GT1                       --------->AtMYB61
<-----------GT1  <----------DOF2     <-----------HVH21                 --------->YAB1     <---------ARR11(3)
--------->ID1 <-----------GT1 ---------->DOF2                         <---------YAB1      --------->ARR11(3)
 
ttgtcactttatgatataaactttttgtcatttaaaagtctgtcagaggtaaaaacaaaaacaaaaacaaaaaatcatagtaaaccaaaacaaaatctag  23235400
                                                                     -------->P                -----
                                                                  --------->At4g35610          -----
                                                                  <---------At4g35610          <----
                                                               --------->At4g35610    <---------ANAC58
                                          ----------->GT1      <---------At4g35610    <---------ANAC58
                                        --------->RAP2.6(3)    <---------ZAT2         <---------AtLEC2
                                       --------->MYB52(1)--------->DAG2     <-----------GT1   ------
     --------->MYB52(1)                *TSS             --------->DAG2 --------->TOE2(3)----------->HVH21
----->YAB1             <---------ARR14(2)<----------ID1---------->DOF2 <---------DAG2 <---------ANAC46
 
aataaacaaaacggagtcgtaagagagaaccggttcgaacaaaaacggcaaaaaaaaaaaaaggggagcagcaacctttttccaattttgcgtgaagcag  23235500
                                                                        --------->GLK1(1)
           <----------ID1                                              <---------ARR14(2)
           ----------->GT1                                            <------ZmHOX2a(1)
          ----------->GT1                                           <---------TOE1(2)              <
        ---------->DOF2                                            <---------LBD16              <---
  ----------->GT1                                              --------->GLK1(2)               <----
--------->ZAT14                                                <-----------ARR10               <----
<---------ZAT14                                               <---------GLK1(2)  ------>ZmHOX2a(1) <
---->ZAT2 ------------------------>ANAC81                 --------->LBD16     <------ZmHOX2a(2)<----
---->At4g35610                                           --------->ANAC46    <---------ARR14(2)<----
-----At4g35610    --------->DAG2                        <---------LBD16--------->ARR14(2)    <------
----->RAV1(1)    ---------->DOF2                     --------->CCA1(2)===============HOX2a_HOX2a----
 
cagtgaagaaaaaaaggaaaaaaagtgagtgagagaagaagattagaaacgacgatatatacggagaatctcaggatttcgatcctgtttttgttttttc  23235600
                                                                                                ----
                                                                                                <---
                                                                                               <----
                                                                                               -----
                                                                                              ------
                                                                                             -------
                                                                                            <-------
                                                                                            --------
                                                                                            <------NtERF2
                                                                                --------->LBD16<----
----------DOF2                                                                  ------>NtERF2-------
------------AGL15             --------->ICU4                                   --------->ANAC46<----
-------------AGL2   <---------DEAR3(1)                                        <---------LBD16<------
-------------AGL3  --------->ATERF1(1)                                   --------->KAN4(2)  --------
---------DAG2      <------NtERF2        <---------ANAC58                ------>ZmHOX2a(2)   ------>NtERF2
-------------AG   ------>NtERF2<---------ICU4                          <------ZmHOX2a(2)    <-------
-------------AGL1--------->ETT(2)       <---------ANAC58              --------->ARR11(3)   ---------
-----GT1    <---------AtLEC2  <---------YAB1  ---------->DOF2         <---------ARR11(3)   <--------
----------->AGL15<---------DEAR3(1)    <---------At4g35610   --------------------->WRI1  <---------LBD16
 
tacttttggtactctccatggcgacggagcgtcatcattttgagcttgctaaaggcatcaatggccttgataagatcgttctccgcgagtctcgcggccg  23235700
                            --------->ZAT18
                            <---------ZAT18
                         <---------ANAC46
     ----------->GT1     <---------ANAC58
--------->ZAT14          <---------ANAC58
--------->At4g35610     --------->ALFIN1
<---------At4g35610     <------NtERF2
<---------ZAT14         --------->ATERF1(1)
----->ARR14(2)         ------>NtERF2
------ARR14(2)        --------->DEAR3(1)
-----At4g35610        <---------DEAR3(1)
---->At4g35610        <---------ANAC46
--->RAP2.6(2)        ------>NtERF2
-->ATERF1(1)         --------->ATERF1(1)
--ATERF1(1)          --------->RAP2.3(1)
->ATERF1(1)          <------NtERF2
-----RAP2.6(3)      <---------ATERF1(1)
-->SPL7            <---------DEAR3(1)
--NtERF2          <---------LBD16                                         <------ZmHOX2a(2)
---DEAR3(1)      <---------O2                 ------>ZmHOX2a(2)    <---------WOX13(1)
->DREB2C(1)      --------->ANAC46            --------->At4g35610 --------->ATHB12              <----
--DREB2C(1)      --------->O2               <---------AGP1      <---------AHL20(2)        --------->ATHB12
>DEAR3(1)       <---------LBD16    --------->ZAT6         <------ZmHOX2a(2)               --------->YAB1
-ATERF1(1)     <-----------GT1<----------DOF2<---------At4g35610<---------YAB1           <---------YAB1
 
ctctgcagaggtaaattttcacgcggcgtcgtgctctatctctagttgatctgagatttagatcaatttgattggagatcgatttttgtagtatgattac  23235800
                                                                                            <-------
                                                                                            <-------
                                                                                            <-------
                                                                                         ------>ZmHOX2a(2)
                                                                                        <------ZmHOX2a(2)
                                                                                        <---------At4g35610
                                                                                        --------->At4g35610
                                                                                        <---------GLK1(1)
                                                                                        --------->GLK1(1)
                                                                                       <-----------ARR10
                                                                                       <---------ARR11(3)
                ------>ZmHOX2a(2)                                                      <---------AGP1
               <------ZmHOX2a(2)                                                       <---------ARR14(2)
              <---------ARR14(2)                                                       --------->ARR14(2)
              --------->AGP1                                                          <---------ARR14(1)
              --------->ARR14(2)                                                      <---------CCA1(2)
              <---------ARR11(3)                                                     --------->LBD16
     --------->ARR14(2)                                                           --------->MYB52(1)
     <---------ARR14(2)              <---------YAB1                              --------->ARR14(2)
    <---------CCA1(2)        --------->ZAT6                                      <---------ARR14(2)
-----YAB1     --------->ARR11(3)   <---------ZAT6                    <---------ZAT6<---------LBD16<-
 
gatttgcaaatctcttagatccttgggttttagctctagtgttattgagttctgtatttgtttatgcaatttgtgttaatggaagaaccggatctgcgtg  23235900
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AGI:  At5g57330.1   
Description:  aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43213.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718)
Range:  from: 23235440    to: 23238315    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.