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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
TEIL
<--------
ATHB1
<---------
ATHB12
<---------
ICU4
---------->
DOF2
<---------
ARR14(2)
--------->
YAB1
--------->
AHL20(2)
--------->
ARR11(3)
--------->
ATHB12
---------->
DOF2
--------->
ARR14(2)
<---------
ATHB12
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
TOE2(3)
<---------
ATHB12
--------->
RVE1(1)
<---------
YAB1
--------->
GLK1(2)
-------->
At4g35610
--------->
CCA1(1)
--------->
YAB1
<---------
GLK1(2)
<---
---------
At4g35610
--------->
LBD16
<---------------------
WRI1
<---------
ANAC58
--------->
ICU4
-
MYB52(1)
----------->
GT1
--------->
AHL20(2)
<---------
ATHB12
<---------
ANAC58
<---------
YAB1
taagctcaataaatcaccagtaaaacccccaaaaaaaaatatctgcaatgaactcaatgataatatacaaattgccttctaagaatctcaatgattagat
23082200
<---
-------
--------->
TOE2(3)
<--------
------>
ZmHOX2a(2)
----------
<---------
WOX13(1)
--------->
TOE2(3)
--------->
ATHB12
<--------
HAHB4
<---------
AHL20(2)
--------->
ATHB12
<---------
YAB1
<---------
ICU4
<---------
ICU4
--------->
ICU4
<---------
AHL20(2)
<---------
YAB1
--------->
WOX13(1)
--------->
ATHB51
--------->
YAB1
<---------
ATHB12
<--------
ATHB1
------>
ZmHOX2a(1)
<---------
ICU4
------>
MYB46(1)
--------->
AHL20(2)
--------->
AHL20(2)
------>
MYB83
<---------
ATHB12
<---------
AHL20(2)
---
--------->
WOX13(1)
<---------
ATHB51
----------->
GT1
<---------
ATHB12
----
TEIL
---------->
DOF2
--------->
ICU4
--------->
TOE1(3)
<---------
ATHB12
<----
tcatacattcaccataaaccaatcaatcgcagaagagaaaacaataatttgattgatccttaaataacttcagtaaaactaataaatcatcattaaaccc
23082300
--------->
ARR11(3)
----------->
GT1
>>>>>>>>>
TBF1
--
--------
RAV1(2)
---
-->
ANAC46
<---------
ARR11(3)
<--
---
GT1
--------->
CCA1(1)
-----
>
DOF2
>>>>>>>>>>
GT-3b
--------->
YAB1
<---------
ARR14(2)
------>
LBD16
--------->
At4g35610
----------->
GT1
--------->
ARR14(2)
-----
LBD16
--------->
RVE1(1)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<-----
cagaagaagaaaaatatcatctcaaaatcagaataaacacaaaatcaatttaagaacgagaaaaaaatcaaatcgaggatgagagaattcgatggaatta
23082400
--------->
At4g35610
<---------
At4g35610
--------->
REM1(2)
--------->
GLK1(2)
<---------
GLK1(2)
--------->
At4g35610
------->
ANAC46
--------->
ZAT14
------>
HSFB2a(2)
<---------
At4g35610
<---------
KAN4(2)
-------
HSFB2a(2)
<-----------
TGA1
<----------
DOF2
--
---->
MYB52(1)
<---------
ZAT14
<---------
ANAC58
<---------
ARR14(2)
<---------
AHL20(2)
------
GT1
----------->
HVH21
<---------
ANAC58
--------->
ARR14(2)
<----------
DOF2
c
cagaaactgtgttgacagcagtcgtcat
cttcgtcttgctttagacgagaatgagcaaattcgatggaatttagggattttgtaggggttttattgtga
23082500
<---------
ANAC58
<---------
AtLEC2
<---------
ICU4
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(1)
<---------
MYB52(1)
--------->
ATHB51
--------->
ANAC46
<---------
ARR14(2)
--------->
AHL20(1)
--------->
ANAC58
--------->
ARR14(2)
<---------
AHL20(2)
--------->
ANAC58
------>
ZmHOX2a(1)
----------->
GT1
--------->
YAB1
--------->
ANAC46
<---------
MYB59
<-----------------
AGL1
--------->
ICU4
<---------
YAB1
*
TSS
<-----------------
AGL2
----------->
GT1
<---------
ANAC58
----------->
RAV1(1)
------->
GLK1(2)
--------->
GLK1(2)
<---------
ICU4
--------->
ATHB12
<---------
ALFIN1
gagtctgaatttgggaaaaatccgttgagaggtaaaaattataattgcatgattcccacaaggcaacactggaatt
ggtcctaatttgaaacatcgccag
23082600
----
<---------
DOF5.7(2)
--------->
DOF5.7(2)
<---------
ALFIN1
--------->
TOE1(3)
<---------
TCP20
--------->
TOE2(3)
<---------
TCP15(1)
--------->
ANAC58
--------->
PCF2
--------->
bZIP60(2)
<---------
PCF2
--------->
ANAC58
<---------
ANAC58
--------->
O2
<---------
ANAC58
<---------
ALFIN1
<------------
CBF
<----------
DOF2
------>
NtERF2
<---------
YAB1
<----------
DOF2
--------->
ANAC58
--------->
TOE2(3)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
At4g35610
<---------
DAG2
<---------
YAB1
<---------
AHL20(2)
--------->
ANAC58
<--
--------->
At4g35610
<----------
DOF2
--------->
AHL20(2)
--------->
RAP2.6(2)
actgttttagcttaatattgggtcccacttttatatgttttatgctaattaagtcattaaatccttctcttttctttgtttagaccgccacgttaactat
23082700
<---------
YAB1
--------->
YAB1
--------->
YAB1
--------->
ICU4
---
<---------
YAB1
<---
--------->
TOE2(3)
---------
<---------
PCF2
--------->
ANAC55(2)
<---------
LBD16
<---------
YAB1
<---------
ANAC55(2)
--------->
TOE1(3)
----->
AHL20(2)
<---------
YAB1
<---------
TOE2(2)
---------->
ID1
--------->
TOE2(3)
-------
AHL20(2)
--------->
AHL20(1)
<---------
TOE1(2)
<----------
DOF2
<----------
DOF2
----
tttataatgggcccttacaaatattatggcccatgggtcttacgttataatggtcatctttgttttttttttggttcagtctaactttaacatgcggaga
23082800
--
<--
----
<------
<--------
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
AHL20(1)
<---------
GLK1(2)
<---------
AHL20(1)
--------->
ARR11(3)
<---------
AHL20(2)
------>
ZAT6
--------->
At4g35610
--------->
AHL20(2)
------
ZAT14
<---------
At4g35610
--------->
AHL20(2)
>
LBD16
----------->
ARR10
<------
ZmHOX2a(2)
<---------
AHL20(2)
----->
ZAT18
<-----------
GT1
<----------
DOF2
--------->
YAB1
<----------
DOF2
--------->
AHL20(2)
acactattggatagatttttactcaagagtcgacttttatgaaatcgatccattcatattttgagttgccatttctttcttatatgaataaaatatattt
23082900
--------->
ANAC58
<---------
O2
--------->
O2
<---------
ICU4
--------->
ANAC46
----------->
GT1
--------->
YAB1
<---------
ALFIN1
<---------
ICU4
--------->
ICU4
<-------
TEIL
------->
YAB1
--------->
YAB1
--------->
CCA1(2)
-------
AHL20(2)
--------->
AHL20(2)
--------->
ARR14(2)
----->
AHL20(2)
----------->
GT1
<---------
YAB1
<-----------
GT1
<---------
ARR14(2)
---
AHL20(2)
--------->
MYB52(1)
----------->
GT1
--------->
ANAC46
--------->
CCA1(2)
------
-
AHL20(2)
--------->
YAB1
<---------
ATHB12
<---------
AHL20(2)
--------->
TOE2(3)
--------->
ANAC58
ttaataactatggaaaaataacgaaaataaaaatcattatagaatagtattttttttatacaaaactacataaatgatatggatacacgtctagcaaaat
23083000
<-----------
GT1
<---------
ANAC46
--------->
ZAT6
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC46
<---------
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
TOE2(3)
<---------
MYB52(1)
---------->
DOF2
<---------
ANAC58
<-------
GAMYB
<----------
DOF2
<---------
ANAC58
<---------
ZAT18
-------
----------->
GT1
--------->
TOE2(3)
<---------
CCA1(2)
--------->
MYB52(1)
---------
---->
DOF2
<-----------
GT1
<---------
TOE1(3)
----------->
HVH21
---------
agcccgttatttatttacactcttcctttaaagttgcaagtcatatcgtgtctctgacttatcggtgcaattttagacaatacagtttcaaactttgacc
23083100
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AGI:
At5g57000.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65331.1)
Range:
from: 23080978
to: 23082576
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.