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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
--------->
ICU4
<----------
DOF2
<---------
YAB1
--------
At4g35610
--------->
YAB1
---
------>
ANAC58
<---------
ICU4
<--
------>
ANAC58
<-----------
GT1
<--------
HAHB4
---
-->
TOE1(3)
<-----------
GT1
--------->
ICU4
<---
-->
YAB1
<---------
GLK1(1)
<---------
YAB1
<---------
LBD16
-->
TOE2(3)
<---------
GLK1(2)
--------->
YAB1
----------->
GT1
<---------
WOX13(1)
aagctacttttgactataaaccagtattggattttcccattgaaacgagtcaaaacactgatcattatgcctcaaattgtgaaaactttcggattgatag
22603100
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
YAB1
--------->
ARR11(3)
<-------
TEIL
--------->
ANAC58
<---------
ARR11(3)
--------->
TOE1(2)
--------->
ANAC58
<---------
CCA1(2)
<---------
ATHB12
--------->
ANAC46
<---------
AHL20(2)
------>
MYB46(1)
<-----
------>
ARR14(2)
--------->
AHL20(2)
------>
MYB83
---------->
DOF2
-------
ARR14(2)
--------->
AHL20(2)
<---------
MYB59
<---------
AtLEC2
------>
GLK1(2)
--------->
AHL20(2)
----------->
HVH21
<-------
TEIL
<------
ZmHOX2a(1)
------
GLK1(2)
<---------
AHL20(2)
---------->
DOF2
--------->
TOE2(2)
--------->
TOE1(2)
aatctgaaacgccattgataaacatataaaaaaatgaattatatatctactctggtaaaagaactgac
caaacatgcgtaaatgcatgaaagtaggagga
22603200
--------->
ANAC58
--------->
ANAC58
--------->
SPL7
----------->
HVH21
--------->
LBD16
<---------
SPL7
<---------
LBD16
------->
GAMYB
-----
--------->
ANAC58
--------->
ARR11(3)
--------->
YAB1
<---------
At4g35610
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ZAT2
<---------
ZAT14
--------->
AHL20(1)
--------->
AHL20(2)
<---------
ZAT2
--------->
ZAT14
<---------
AHL20(1)
--------->
YAB1
--------->
At4g35610
--------->
ANAC58
<---------
ALFIN1
<---------
YAB1
-
ZmHOX2a(1)
--------->
ANAC58
---------->
ID1
--------->
ANAC58
--------->
MYB46(3)
--------->
YAB1
ttgaaactcccagttgccacaagcactacacaagttttgtcc
ctgtttcagacaaacaatcgaaaatattcaacacccggacggaattttaataataaac
22603300
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
YAB1
<------
ZmHOX2a(2)
<---------
ICU4
------>
MYB83
--------->
YAB1
------>
MYB46(1)
--------->
GLK1(2)
--------->
AtLEC2
<-----------
ARR10
--------->
MYB46(3)
<---------
GLK1(2)
<-----------
GT1
--------->
YAB1
<----------
ID1
----------->
ARR10
--------->
ANAC55(2)
<-----------
GT1
---------->
DOF2
--------->
YAB1
------>
RAV1(2)
<---------
YAB1
--------->
At4g35610
<---------
GLK1(2)
<---------
ATHB12
<------
ctggtgagaatctcatcatcataagtaaccaagcagatcaaatttacaaaatcagaattttcacaaaaaagacaaatgaagggaatcaaaatcgagaata
22603400
------->
TEIL
<---------
GLK1(2)
<-
<---------
WOX13(1)
--
--------->
ATHB12
<-
--------->
HSFB2a(2)
<---------
YAB1
--
<---------
ARR11(3)
<-------
TEIL
<---------
At4g35610
<---
<-----------
GT1
--------->
ARR11(3)
--------->
GLK1(1)
--------->
ICU4
<------------
---
KAN4(2)
------>
ZmHOX2a(2)
--------->
MYB52(1)
--------->
YAB1
-------------
agcttcaaaatttac
tcagtgtttgatccataagataatttctcgactggtaacgggacatccat
tgaactctgatgattgaatctcagtctcttaatgg
22603500
--------->
LBD16
------>
NtERF2
<---------
DEAR3(1)
--------->
ICU4
<---------
LBD16
<------
NtERF2
--------
ZAT2
<---------
DEAR3(1)
---
------->
At4g35610
--------->
ATERF1(1)
--------->
MYB52(2)
--------
At4g35610
<---------
ATERF1(1)
<---------
MYB46(3)
------->
ZAT2
--------->
At4g35610
------>
NtERF2
--------->
ANAC58
-----------
-----
P
----------->
HVH21
------>
NtERF2
<---------
AHL20(2)
---------->
DOF2
---
---
AGL15
--------->
YAB1
--------->
DEAR3(1)
--------->
CCA1(2)
<---------
TOE1(2)
---
-->
AGL15
<---------
KAN4(2)
*
TSS
----------->
HVH21
---------->
DOF2
--------->
ANAC58
<---------
TOE2(3)
tagctccggcga
atgatcagggacagcgaaaataagacgacgacggcgaaagtattaaaagatagagagaaacgacatcgtatgaaaaag
gtttgttaaa
22603600
<-------
GAMYB
----------->
GT1
<--------
P
<---------
MYB52(2)
<---------
TOE1(3)
<---------
At4g35610
<---------
TOE2(3)
--------
--------->
At4g35610
<-----------
RAV1(2)
--------->
DAG2
<---------
At5g28300
<-----------
HVH21
---------->
DOF2
------>
ANAC58
--------->
ANAC46
--------->
ANAC46
----------->
GT1
>
GT1
<-----------
GT1
<---------
ARR11(3)
--------->
ANAC58
<---------
ANAC58
------>
ANAC58
--------->
ARR11(3)
----------->
GT1
------->
TEIL
<---------
ANAC46
------>
ANAC46
--------->
MYB52(1)
--------->
ANAC46
--------->
ANAC58
<---------
ANAC58
--
acgaaacgttttacagctaacgagaagatagatattagacacaatacgaagccgtttaaaactaaacgcatcgttcaggtagcgagggttaaaaaagcta
22603700
------->
GAMYB
--------->
ZAT6
--------->
MYB52(1)
--------->
ANAC46
---------->
DOF2
--------->
LBD16
--------->
LBD16
<-------
TEIL
--------->
ANAC58
<----------
DOF2
--------->
ZAT18
--->
GT1
--------->
ANAC58
--------->
ARR11(3)
--------->
ARR14(2)
-------->
DOF2
<---------
AHL20(2)
<---------
ARR11(3)
<---------
ARR14(2)
aaaaagcttcattctatttttttcagtgaaaaacgaaagcgaaaatgaaatctttatccccaaaattttgaaattcaaatccgcgctaacagtctctctc
22603800
<---------
DEAR3(1)
<---------
RAP2.3(1)
------>
NtERF2
<---------
DEAR3(1)
<---------
At1g77200
<------
NtERF2
--------->
ATERF1(1)
<---------
ATERF1(1)
<---------
<-----------
HVH21
<-----------
ARR10
<---------
DEAR3(1)
<---------
ARR14(2)
<---------
ARR11(3)
<------
MYB83
--------->
GLK1(2)
--------->
GLK1(2)
<---------
AtMYB61
--------->
ARR14(2)
<---------
ARR14(2)
--------->
MYB111(1)
--------->
YAB1
--------->
ARR14(2)
--------->
MYB59
<---------
WRKY12
--------->
ICU4
<-----
<--------
P
<------
NtERF2
--------->
WRKY18(1)
<---------
YAB1
<-----
--------->
ZAT6
<---------
SPL7
<---------
MYB52(1)
<------
NtERF2
--------->
ARR11(3)
<----------
DOF2
<------
MYB46(1)
<-----------
HVH21
<---------
DEAR3(1)
<---------
GLK1(2)
tctctctcgctctatctctag
agtaggtcgtcggcgatgttttccgtcaaggagaatccgagggggaagacggcgaatgtgaagattgagaatcttttcg
22603900
----------->
HVH21
<----------
DOF2
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<<<<<<<<<
GATA-3
================
HOX2a_HOX2a
<<<<<<<<<
GATA-4
<------
ZmHOX2a(2)
<<<<<<<<<
GATA-2
=================
HOX2a_HOX2a
<------
ZmHOX2a(2)
----
--------->
AGP1
<<<<<<<<<
GATA-1
<---
<---------
ARR14(2)
--------->
ARR11(3)
----
--------->
ARR11(3)
<---------
AGP1
<---
<---------
AGP1
<---------
ARR14(2)
<------
NtERF2
<---------
ARR11(3)
<---------
At4g35610
---------
--------->
ARR14(2)
--------->
At4g35610
--------->
ANAC46
<---------
CCA1(2)
<-------
TEIL
--------->
ARR14(2)
================
-
DOF2
--------->
ARR14(2)
<---------
ARR11(3)
-------->
P
<---
----
ANAC58
<---------
ARR14(2)
----------->
RAV1(1)
--------->
At4g35610
--------->
DEAR3(1)
----
ANAC58
<------
ZmHOX2a(1)
<---------
ZAT2
<---------
CCA1(2)
<---------
At4g35610
<---------
LBD16
ttcagatctttgagaggaagaggcgaatcgtcgagcaggttcagcaacaagtagatctctatgaccagcatttagcttccaaatgcctactcgccggagt
22604000
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AGI:
At5g55810.1
Description:
ATNMNAT (A. THALIANA NICOTINATE/NICOTINAMIDE MONONUCLEOTIDE ADENYLTRANSFERASE); nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase. similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49375.1); similar to Os02g0814900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048497.1); contains InterPro domain Cytidylyltransferase; (InterPro:IPR004820); contains InterPro domain Probable nicotinate-nucleotide adenylyltransferase; (InterPro:IPR005248); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)
Range:
from: 22601234
to: 22603527
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g55820.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO45135.1)
Range:
from: 22603513
to: 22611261
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.