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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
GT1
--------->
DAG2
---------->
DOF2
<---------------
AGL15
<---------
TOE2(3)
--------------->
AGL15
--------->
ZAT18
-->
ZmHOX2a(2)
--------->
YAB1
<---------
ICU4
---->
At4g35610
<-------
TEIL
--------->
ICU4
-----
-----
At4g35610
--------->
YAB1
------>
ZmHOX2a(1)
--------->
ANAC46
<-----
----
ARR11(3)
<-----------
GT1
<-----------
GT1
<---------
ZAT18
------
ctgcaatataaagttataacaataagatgcaaaattttacaatctagtccttatggcactaagtttacgaaaacaattcatgtctaataagcccattacc
21315700
-------->
ATHB1
-------->
HAHB4
--------->
ATHB12
--------->
ATHB51
<---------
AHL20(2)
<---------
ICU4
--------->
ICU4
--------->
ANAC58
<---------
ATHB51
--------->
ANAC58
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
<----------
DOF2
--------->
AtLEC2
<---------
MYB46(3)
--------->
AHL20(2)
<---------
DAG2
<---------
ANAC58
<---------
MYB46(3)
--------->
AHL20(1)
--------->
GLK1(2)
<---------
ANAC58
--------->
ALFIN1
---->
TOE2(3)
------>
ZmHOX2a(1)
<---------
ANAC55(2)
<---------
GLK1(1)
----
ANAC55(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
ANAC46
<---------
AtMYB61
-
----->
RAV1(2)
<---------
At4g35610
--------->
ANAC55(2)
--------->
GLK1(1)
-------
tgaattaattattgggccttaagctcctaatattctgaccttttgtatttcaaaatcatgtattccttgcataacaagaaatctgatggtggtgattcga
21315800
------>
ZmHOX2a(1)
--------------->
AGL15
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(1)
===================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
At4g35610
====================
HOX2a_HOX2a
--------->
ARR11(3)
<---------
AHL20(2)
--------->
GLK1(2)
<-----------
GT1
--------->
AHL20(2)
<---------
ARR11(3)
----------->
GT1
--------->
ICU4
--------->
ARR14(2)
--------->
ZAT14
----------->
GT1
<---------
DAG2
<---------
ARR14(2)
<---------
ZAT14
----------->
GT1
<----------
DOF2
--------->
DOF2
<---------
AGP1
<---------------
AGL15
--------->
GLK1(2)
--------->
AHL20(2)
---->
GT1
<------
ZmHOX2a(1)
----------->
GT1
<---------
GLK1(2)
--------->
AHL20(2)
taaaaagagttcgataggatctgaaatcttcctacaagaagtaaactgtttaacagaatttgttaaatgtaataaataaaaacttttccatatttatcgg
21315900
--------->
ZAT2
<---------
At4g35610
<----------
DOF2
<---------
DAG2
--------->
HSFB2a(1)
------>
MYB46(1)
------->
PIF5
<---------
HSFB2a(1)
-------->
P
<-------
PIF5
<---------
AHL20(2)
------>
MYB83
--------->
ZAT2
----
<---------
AHL20(2)
------>
ZmHOX2a(1)
>>>>>>>>>
GATA-1
<---------
ZAT2
---------
--------->
AHL20(2)
<----------
DOF2
------------>
CBF
--------->
TOE2(3)
----------->
GT1
-----
aaaaataaatggaacctttccagctttcctataccaactccaaattccaatagataaacattcttaaaccctagcaggggctcgataaaaactaaaaaat
21316000
----
--------->
LBD16
------------
<-----------
---------->
DOF2
<-----------
--------->
ANAC46
<----------
DOF2
------------
--------->
ANAC58
<---------
ANAC58
------>
MYB83
------>
MYB46(1)
--------------------->
WRI1
------>
MYB46(1)
------>
MYB83
<----------
DOF2
--------->
AtMYB61
----->
AHL20(2)
<---------
At4g35610
------->
TEIL
---------->
ID1
<----------
DOF2
<-----------
GT1
>
AHL20(2)
--------->
ANAC58
-------->
P
<-----------
RAV1(1)
--------->
ICU4
---------
---->
AHL20(2)
--------->
At4g35610
--------->
TOE2(3)
<---------
ANAC58
---------->
DOF2
<----------
aaaaaaaccaaacacgaaagctgcaaacatcgattaacatcaaccttctctttgttgctttcgctctcgctctatagcaaag
atgaaacctccccaaaga
21316100
------->
GT1
<---------
MYB46(3)
----->
AG
<--------
P
<---
------
AG
--------->
ZAT2
<-------
GAMYB
-----
------
AGL1
<---------
ANAC46
<---------
MYB52(1)
----->
AGL1
<---------
MYB52(1)
--------->
AHL20(2)
--------->
ALFIN1
<---------
ARR14(2)
->
DOF2
<---------
ZAT2
<-----------
GT1
<-----------
GT1
<-------
GAMYB
--------->
ARR14(2)
-----
AGL15
<---------
RAP2.6(3)
<---------
AHL20(2)
<---------
ZAT14
<-------
GAMYB
<-------
TEIL
g
gttagaaccctagcagccgttttgttttactacttgtttaatttctctgttcgacctatagtatagggttgagggttgttaactccaaattcgttttgt
21316200
--------->
TOE2(3)
<---------
ANAC46
<---------
ANAC55(2)
<---------
ANAC58
--------->
TOE2(3)
-------->
P
<---------
ANAC58
------->
TEIL
--------->
ANAC55(2)
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR11(3)
<---------
ANAC58
<-----------
GT1
<---------
CCA1(2)
--------->
ANAC58
--------->
YAB1
--------->
AHL20(1)
<---------
ANAC58
-------->
HAHB4
<---------
ARR11(3)
<---------
ANAC55(1)
--------->
YAB1
<-------
<---------
AHL20(1)
<-----------------------
TaNAC69(2)
<---------
AHL20(2)
--------
GT1
<---------
ANAC46
--------->
AHL20(2)
---
----->
ID1
----------->
RAV1(2)
----------------------->
TaNAC69(2)
<------
ZmHOX2a(1)
<---------
At4g35610
cacaatatatctacctgaattgcttgttacgtaaactgttttgagtcttcacttcttcaatccaagtttaataggagatttaataatactctcttctgat
21316300
<--------
<---------
ZAT6
<--------
<---------
AtMYB61
<--------
--------->
ALFIN1
<--------
<---------
MYB46(3)
<---------
<---------
DEAR3(1)
----------
<---------
AtMYB61
----------
--------->
ALFIN1
--------->
ZAT18
------->
PIF5
--------->
ALFIN1
<-------
PIF5
----------->
HVH21
<---------
ANAC46
--------->
At5g28300
<---------
ANAC58
<------
NtERF2
<--------
<---------
YAB1
--------->
ALFIN1
<---------
ANAC46
<---------
AHL20(2)
--------->
YAB1
<---------
bZIP60(2)
--------->
ALFIN1
<-------
--
YAB1
<---------
YAB1
<---------
ANAC58
<---------
DEAR3(1)
-------->
GT1
<-----------
GT1
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
ABI4(1)
<-------
tagttaatttcggttttatctgtatgattatgctcag
gacgtggtggtggtgttagaggtggaagaggtttagccagaggcggtgaaggaagtgccgtaa
21316400
<---------
ANAC58
<---------
ANAC46
---------->
DOF2
<------
NtERF2
--------->
RAP2.3(1)
<---------
ERF1
--------->
ALFIN1
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
ATERF1(1)
--------->
ALFIN1
<---------
ANAC58
--------->
At4g35610
--------->
ALFIN1
-
ANAC55(2)
------>
NtERF2
--------->
LBD16
-
ANAC46
<---------
ORA47(2)
-------
AGL15
<---------
RAP2.3(2)
-
ANAC58
<---------
DEAR3(1)
----------->
GT1
<---------
ZAT6
--------
AGL1
<---------
RAP2.6(2)
---------->
DOF2
--------->
MYB52(1)
-----
------->
AGL1
--------->
ATERF1(2)
----------->
GT1
<---------
DEAR3(1)
---------->
DOF2
------->
AG
<---------
ANAC46
<---------
ZAT6
<---------
ORA47(1)
--------->
ANAC58
-
ANAC58
<---------
RAP2.3(3)
--------->
HSFB2a(2)
--------->
SPL7
--------->
ANAC58
<-
--
RAP2.6(3)
--------->
ATERF1(1)
<---------
HSFB2a(2)
<---------
SPL7
<---------
TOE2(3)
-------
--
SPL7
<---------
ABI4(1)
<---------
ANAC46
----------->
HVH21
<------
ZmHOX2a(1)
--
gaggcagtggaagaggcggcgaaagtggccgtggaagagggcctggaagagttaaaagtgaatcggacggtggaattaagggaggaagcaaagtgttagt
21316500
======================
RAV
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
ALFIN1
--------->
ZAT14
<---------
ZAT14
--------->
AtMYB61
<-------
GAMYB
<---------
GLK1(2)
-
<---------
ALFIN1
<-----------
RAV1(1)
--------->
ARR14(2)
-
--------->
ANAC46
--------->
MYB52(2)
<---------
ARR14(2)
<
--------->
ANAC58
<---------
MYB46(3)
<---------
At4g35610
-
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
At4g35610
<
------>
HVH21
<-----------
RAV1(2)
--------->
DAG2
------>
ZmHOX2a(1)
<
--------
bZIP60(1)
--------->
ALFIN1
--------->
DAG2
<---------
ANAC46
--------->
YAB1
-->
MYB52(2)
--------->
ANAC58
---------->
DOF2
--------->
ARR11(3)
<---------
ATHB12
<-
------->
bZIP60(1)
<---------
ZAT6
---------->
DOF2
<---------
ARR11(3)
--------->
ICU4
<-
gacaccacacaggcacgcaggagtgtttgttgccaaaagtaaagcagatgctcttgtaaccaagaacttagttcctggtgaaatcatttacaatgagaag
21316600
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AGI:
At5g52490.1
Description:
fibrillarin, putative. Identical to Putative rRNA 2'-O-methyltransferase fibrillarin 3 (FIB3) [Arabidopsis Thaliana] (GB:Q9FHB3); similar to FIB1 (FIBRILLARIN 1) [Arabidopsis thaliana] (TAIR:AT5G52470.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692)
Range:
from: 21316083
to: 21317465
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.