Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <----------DOF2                                ------->TEIL          <---------ANAC58                  --------->AHL20(1)   <---------ANAC58          <---------ANAC58                  <---------AHL20(2)   <---------ANAC58        ------>NtERF2                       <---------AHL20(1) <---------YAB1 --------->ATHB12              --------->KAN4(2)         <---------AtLEC2 ---->ALFIN1    <---------AtLEC2   <----------DOF2   <---------AtLEC2                               - ->DOF2<---------RAP2.3(3)<---------ANAC46  --------->AHL20(2)------->TEIL                          <   ggatgtttgggggcttttgcatcaagttgtgtttattcttttgtaataaattgctgcatgcatgtatgcttgtgttcaaaattttggatttgttttagag  20751000                                --------->DAG2                               ---------->DOF2                            --------->YAB1                              --------->ALFIN1      --------->YAB1       <---------YAB1                         --------->AHL20(2)     <---------YAB1     <---------AHL20(2)                        <---------AHL20(2)   --------->ANAC55(2) -------->ANAC55(2)     --------->AHL20(2)                  --------->YAB1             <---------ANAC55(2) ---------ANAC55(2) <---------AHL20(2)                      --------->AHL20(2)     <-----------HVH21   tcatgtgattatagtattctaagtaatttatcataaagtttgtcatatatacttaagtttaataaaaaataaatgtgtgtgaaaatgtcacatattggtg  20751100                                                                        <---------AHL20(2)  ---------            <-----------HVH21                                       --------->AHL20(2)     ----------           ----------->GT1      <-----------HVH21     <-----------GT1   --------->AHL20(2)<---------ATHB12       --------->AHL20(2)   <-------TEIL<---------ANAC55(2)        <---------YAB1  --------->ZAT18   tttttgttataaaatgtcaaatattctaagtacatgtcaaatacttaagtcatgtataacatgttttctattatttatatttatgtccaccaataaagca  20751200                                                                                                    -                                                                                                    -                                                                                                    -                              <---------WOX13(1)                                                  <--                            --------->ATHB12                                                   ------                        <---------AHL20(2)                                                    <------                       --------->AHL20(2) <---------AHL20(2)                                 --------               <---------GLK1(2)          --------->AHL20(2)                                 <------- >DAG2         --------->ARR14(2)       <---------WOX13(1)      <---------AHL20(2)     --------->ANAC58 >DOF2         <---------ARR14(2)  <----------DOF2  <----------DOF2 --------->YAB1     --------->ANAC58   cttatatatcaaaaacagattgggattaaatgatagactttgatttatatgagacttttgcgacattttatcaaaatatgagaatagacaaacaatatca  20751300                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                              -------                                                                             ------>MYB83     -------                                                                             ------>MYB46(1)  -------                                                                           <---------MYB59   <------- -------->ANAC58                                                           --------->AtMYB61 *TSS---- -------->ANAC58                                                         ------>MYB83        ------>NtERF2 -------->ANAC46                                                        --------->ORA47(1)  --------- -------ICU4                                                           --------->MYB46(3) --------->ANAC46 --->YAB1 <---------AtMYB61              --------->TOE2(3)            --------->DEAR3(2)<-----------GT1 ---YAB1<------------CBF                 --------->TOE1(3)    --------->AHL20(2)       --------->ARR14(2) ->ARR11(3)       ---------->DOF2<-------TEIL      <----------DOF2  <-----------GT1 --------->AHL20(2) --ARR11(3)  <---------------------WRI1  --------->YAB1   ----------->GT1------>MYB46(1)--------->CCA1(2)   tcacgacatgaattggtcgataaggcccatgaaggtccagtaatcttaatgggctttatacagataaattataccgaccaaatcgattatatacgcgccg  20751400                          <------NtERF2                         ----------->RAV1(1)                         ------>NtERF2                        --------->RRTF1(2)                        --------->RAP2.3(2)                        --------->DREB2C(2)                        --------->RRTF1(3)                        --------->ANAC46                        --------->RAP2.6(2)                        --------->ATERF1(2)                        --------->DEAR3(1)                        --------->RAP2.3(3) ---NtERF2              <---------ATERF1(2) ->NtERF2 ------->GAMYB--------->ERF1 -----ATERF1(1)        --------->ORA47(2) --->RRTF1(3)          --------->RAP2.3(1) --->RAP2.3(3)         --------->ATERF1(1) --->RAP2.3(2)        <---------RAP2.3(1) --->DEAR3(1)         <---------ATERF1(1) -->DEAR4(2)         --------->ANAC46 -->ATERF1(1)     --------->ARR14(2) -->ERF1  --------->AtMYB61 -->RRTF1(1)      <---------ARR14(2)                                <---------HSFB2a(2)        ------ -->RAP2.3(1)     --------->KAN4(2)                                 --------->HSFB2a(2) --------->CCA1(2) --ATERF1(1)     <----------TaMYB80                                 --------->HSFC1(1) <---------ARR14(2) ----->ATERF1(1)---------->TaMYB80                   <----------ID1 <---------HSFC1(1) --------->ARR14(2) >ANAC46 --------->MYB46(3)     --------->At4g35610  --------->ANAC46               <----------------   tcgtcttctcaaccatcgcatattcgccgccataagcagagagtttcacatataaacgaaaaattcccttcgagaagtctcaagtcgacgatatggagaa  20751500                   <---------DOF5.7(2)                                                        ------>MYB46(1)                   --------->MYB52(1)                                                       ---------                 --------->DOF5.7(2)                                                        ---------               --------->ANAC58                                                             <--------               --------->ANAC58                         <---------ANAC58                   ==========         --------->LBD16                   <----------DOF2                                 ----------        <---------HSFB2a(2)                ------>ZmHOX2a(1)<---------CCA1(2)            <-----------GT1        --------->HSFB2a(2)  --------->ANAC58           <---------ANAC46         <---------ANAC58 --->MYB52(1) --------->ZAT18--------->ANAC58  <-----------GT1                   <---------ANAC58 -----WRI1   <------ZmHOX2a(1)        --------->WOX13(1)<---------ANAC58      <----------DOF2 ------>MYB83   cggagacattccagaggacgctaacgagcgtaagcaaaatcaatccttttttcagttttcttgtagcttcaatcgctcttctttcttggtttaacctaat  20751600                                                                                    -----------------                                                                                    -----------------                                                                                    <---------------AGL15                                                                                    <----------------                                                                                   ----------------->AGL2                                                                                   ----------------->AGL1                                                                                  --------->ZAT18                                                      <---------At4g35610         ------>NtERF2                                                      --------->ZAT2           --------->ATERF1(1)                                                  --------->GLK1(2)           ------>NtERF2                   ----------->GT1                <---------ARR14(2)         --------->ATERF1(2)                 <---------ANAC46             --------->YAB1          <---------ANAC58                 <---------ANAC58            <---------ATHB12         <---------ANAC58           <---                 <---------ANAC58          --------->WOX13(1)      <---------GLK1(2)--------------->AGL15              <--------P                 ------>ZmHOX2a(1)         <---------ARR14(2)        <------ZmHOX2a(1)             <-------GAMYB           <---------ARR14(2) --------->HSFB2a(2)  <---------ATERF1(2) <--- >TOE2(3)    <---------ANAC58        --------->ARR14(2) <---------HSFB2a(2)--------->At4g35610  ----- ------>AGL15<---------ANAC58       <---------ZAT2--------->ARR14(2)--------->GLK1(2)     --------->YAB1 -MYB59  <----------DOF2     <---------WOX13(1)  <---------GLK1(2) --------->ARR14(2)    <---------ATHB12 ==================================================================================================== ------->AG <---------MYB46(3)    <-----------RAV1(2) --------->At4g35610  <---------At4g35610  <----   tgggttttgttctttggttgcttgttaatagattgcccaggtcctcaatcagaatctgctggaaaatcagattcttgtgctggctgccctaatcaggaag  20751700                             --------->ZAT2                            <---------TOE1(2)                            <---------TOE2(2)                      ----------->HVH21 >AG                 <---------MYB59 >AGL1              ----------->RAV1(2)            <----------DOF2 -AGL1  <---------At4g35610<-----------RAV1(2)  <-----------GT1                                  <--- ------ANAC58       --------->At4g35610         <---------AHL20(2)                              <---- ------ANAC58     <------ZmHOX2a(1)       <----------DOF2    <------MYB83                      <----- ---->HSFC1(2)---------->DOF2<---------ZAT2 <---------AHL20(2)                          --------->YAB1 =MADS_MADS  ------>ZmHOX2a(1)         <-----------GT1       <------MYB46(1)    <----------DOF2<----- -----HSFC1(2)--------->MYB52(1)<-------TEIL--------->AHL20(2)       <---------AtLEC2  <-------TEIL   cttgtgctactgctcctaaaggacctgacccaggttcgatttcactttaattactttgtggctaggtttttgaatgtctctgctttcgattcatacttag  20751800                                                                                    <---------ARR14(2)      --------->AHL20(2)                                                            ------->TEIL  <---------YAB1                                                                    --------->ARR14(2) ---ZmHOX2a(1)            <-----------RAV1(1)                                      <---------CCA1(2) -----YAB1                <---------REM1(1)                             <---------At4g35610 ----TOE2(2)              <---------MYB46(3)                            --------->At4g35610 ----TOE2(3)        <-----------RAV1(1)     <XXXXXXXXXXXXXXXXXXXMIR866-3P      <----------DOF2<------   gattacaatttaaaacttggttttgttgttgttgcaatttctagttttgaagatgggttttgtatcaatgggttagatgagctttgtatcttctatttac  20751900  Previous    Next  AGI:  At5g50960.1    Description:  nucleotide-binding family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to H0811E11.6 [Oryza sativa (indica cultivar-group)] (GB:CAC09490.2); similar to OSJNBa0081L15.19 [Oryza sativa (japonica cultivar-group)] (GB:CAE03157.2); contains InterPro domain Mrp, conserved site; (InterPro:IPR000808) Range:  from: 20751393    to: 20753281    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.