Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ----------------->AGL3         --------->ANAC46         --------->ANAC58 --------HSFB2a(2) ------->HSFB2a(2) -------LBD16                                ---------->DOF2 ---->GLK1(2)             ----------->GT1 --------->ANAC58                                  --------- -----ARR11(3)           --------------->AtSPL3                                         --------->ATHB12 ---->ARR11(3)           --------------->AtSPL8                                        <---------YAB1 ---->ARR14(2)          --------->GLK1(2) --------->ANAC58                           --------->YAB1 -----ARR14(2)         <---------GLK1(2)---------->DOF2      --------->ANAC58       --------->ICU4 --->RVE1(1)  --------->ICU4          --------->YAB1         --------->ANAC58  --------->ANAC58 ----GLK1(1)<---------------AGL15  --------->YAB1           <---------TOE2(3)  --------->ANAC58 --ANAC81--------->ANAC58<---------------AtSPL8            --------->MYB52(1)  --------->ANAC46     <   tctggaagttcaagccaaaattagagaatcgtacaaataatcaaaagcaaagcacaattactaacgaaatcgcaaatgtgtaagcaattttgatttgtaa  20621800                   ----------->GT1                                                       --------->DEAR3(1)           ------>MYB46(1)                            --------->ANAC58               <---------ABI4(2)      <-----------GT1                                 --------->ANAC58   --------->DAG2  ----------->HVH21   <---------At4g35610                           --------->ANAC58      ---------->DOF2   --------->DREB2C(2)   --------->At4g35610                   ----------->TGA1            <---------RAP2.6(3) --------->At1g77200 -->GT1    ------>MYB83    --------->MYB59       --------->ANAC58   --------->RAP2.6(2) --------->DEAR3(2) -------TEIL  --------->LBD16            ----------->HVH21 <---------ALFIN1 --------->GLK1(2)   aattcatctcaccatccagagaggcaaattaggcaattggccagtgacgacgagccaaacaacaccgtagccgaaaaggttctgagttgcaccgacgagt  20621900                                                      --------->ATERF1(1)                                                      ----------->HVH21                                                      <------NtERF2                                                     <-----------HVH21            <------MYB46(1)                          <-----------TGA1            <------MYB83                            <---------ANAC58         <------ZmHOX2a(1)                          <---------TGA2(1)       --------->LBD16                              --------->bZIP60(1)      <---------LBD16                               --------->TGA2(1)      <-----------RAV1(2)                  ------->TEIL   --------->DEAR3(1)    ------>MYB46(1)                        <---------ARR14(2)                --------->HSFB2a(2)    ------>MYB83                   --------->LBD16  <---------ANAC58         <---------HSFB2a(2)  --------->DEAR3(1)             <---------LBD16    <---------ANAC46        --------->DEAR3(1)  --------->AtMYB61             --------->MYB52(1)  <---------bZIP60(1)   ------>NtERF2  ------>ZmHOX2a(2)  <---------ALFIN1          --------->DAG2 --------->ARR14(2)        <---------At4g35610<------ZmHOX2a(2) --------->MYB46(3)        ---------->DOF2 --------->GLK1(2)<---------TOE2(2)------>NtERF2      <----   agaaccacccaggaaggtgagacttcagataaagcaccggagacgaatccgatggcgtcaccgaggtttttagctacgccgagaagagcgatctgtttct  20622000                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                  <---------ANAC46                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                ------>NtERF2                                                                <---------ATERF1(1)                                                               --------->DEAR3(1)                                                               <---------DEAR3(1)                                                               ----------->HVH21                                                              --------->RAP2.3(1)      --------->DEAR3(1)                                        ------>NtERF2         <------NtERF2           <------NtERF2                                        --------->At4g35610   --------->ATERF1(1)     --------->ATERF1(1)                                        --------->LBD16      <---------RAP2.3(1)      <-----------RAV1(2)                                       --------->RAP2.6(2)   ------>NtERF2           <---------At4g35610                                       --------->RAP2.3(2)   <---------ATERF1(1)    <---------ANAC46                                       --------->RAP2.3(3)   --------->LBD16    ------->MYC3                                      --------->ATERF1(1)   <---------DEAR3(1)  <-------MYC3                                      --------->RRTF1(1)    --------->ATERF1(2)<---------TGA1a                           <------NtERF2<---------ATERF1(1)--------->ATERF1(1) ======================                          --------->LBD16 --------->DEAR3(1)--------->DEAR3(1) --------->TGA1a                         --------->ETT(1)--------->RAP2.3(1)<---------ATERF1(2)--------->O2                        <---------LBD16--------->ATERF1(2) <---------LBD16     <---------O2                     <---------WOX13(1)--------->DEAR3(1) ===============================MYC_MYB                    <---------ANAC58  --------->ERF1   <---------ATERF1(1)     --------->PIF3(3)                    <---------ANAC58  --------->RAP2.3(1) ------->GAMYB        ----------->RAV1(2)                   --------->ATHB12   --------->DEAR3(2) --------->ANAC46 <---------TCP15(1)      ---                  --------->ICU4     <---------At4g35610 --------->DEAR3(1)  <---------ALFIN1     ---       --------->MYB52(1)<---------ANAC46<------NtERF2 --------->MYB52(1) --------->PCF2  --------->ANAC58 -----YAB1        <---------YAB1  ---------->DOF2     <---------WRKY38(1) <---------TCP20 --------->ANAC58   gattgtagccaagggaagtcttgattgccggagacatagagccgccgaatagatagccaacgccggcgacggattggacccacatggcgcagacgaaaac  20622100            <---------WRKY18(1)           --------->WRKY45       --------->ANAC58           --------->WRKY38(1)    --------->bZIP60(1)           --------->WRKY12       <---------bZIP60(1)          --------->DOF5.7(2)     --------->TGA2(1)         <-------GAMYB            <---------TGA2(1)        --------->MYB55(2)        --------->ANAC46        <---------MYB46(3)        --------->ANAC58        --------->MYB52(2)     ----------->TGA1<---------YAB1  --------->MYB52(1)--------->GLK1(1)----------->RAV1(1)                                     <------- ================MYC_MYB       ----------->HVH21                                  *TSS      <-------GAMYB ------>ANAC58      --------->At4g35610 ---------->DOF2                         --------------------- ------>ANAC58    <------ZmHOX2a(1)------>NtERF2--------->YAB1                  <----------DOF2   <--   tagccatcggtcgttgactaggagctctagtttgtgacgccacaaagtcatcatagtcaaacgctctcaaaactttctatttctttttttttttcgttga  20622200                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)         --------->ANAC55(2)                                      --------->AHL20(1)   <---------YAB1      <-----------GT1                            --------->AHL20(2) --MYB52(1)          --------->ICU4                   --------->At5g28300       <-----------TBP >WRI1   <---------ANAC55(2)         ---------->DOF2 ----------->GT1        --------->ANAC55(2) -----TEIL      ----------->GT1 ---------->DOF2   <---------ALFIN1<---------AHL20(2)  <-----------GT1   ttcatatgattacttattttgtaattttcagtttcaaagaaaagtttggacaacaccgtaaatacaaataaaatgtttacttatttatatacaattcatg  20622300                                                                                  <---------TOE1(2)                                                                                  <---------TOE2(3)                         ----------->GT1                                          <---------TOE2(2)                     ----------->RAV1(1)                <---------ATHB12          <---------TOE1(3)                    <----------ID1                    --------->WOX13(1)     --------->ANAC58                  ------------------------>ANAC81   <---------ATHB12         --------->ANAC58                  --------->ANAC46              --------->ANAC46        --------->ZAT14 <---------TOE1(3)--------->ANAC58              --------->ANAC58        <---------ZAT14 <---------TOE2(3)--------->ANAC58              --------->ANAC58      --------->ANAC46   tgtaaggttgagaaacaaataagcaacaagataaaaaaaaaaaaaaaaacacgaatcaatgaagaggtatacacttcacaagcttaggtttaaaaattgg  20622400                                                                   --------->AtMYB61                -                                                                  --------->ANAC46                  <                                                                --------->REM1(1)              ------                                                           <---------TOE1(3)                  -------                          --------->LBD16                  <---------------AtSPL8           ---------                    ------->TEIL          --------->MYB52(2)   <-------TEIL        <---------At4g35610              <----------DOF2      --------->GLK1(2)    <----------DOF2            --------->At4g35610              <---------DAG2       ------->TEIL      <---------ANAC46              --------->ZAT2   -   ---------->DOF2 <---------CCA1(2)    <---------MYB52(1) <---------TOE2(3)       <---------ZAT2 <--   tttgcaaaagcattcacttttgtatctccccaaaatgaatctgttagtttgagttgcgcttaaggtacaccaaaactccaagtccagcagcaagagcagc  20622500    <------NtERF2    <---------At4g35610    --------->At4g35610 --------->ZAT2 <---------ZAT2          ------>NtERF2 --------->At4g35610   --------->ATERF1(1) ----->NtERF2         --------->ZAT2 ---------ATERF1(1)   <---------At4g35610                 ------>ZmHOX2a(1)           <----------DOF2 --->At4g35610        --------->At4g35610             --------->ARR14(2)          <XXXXXXXXXXXXXXXXXX -->DEAR3(1)          --------->ATERF1(1)             <---------ARR11(3)        <---------ZAT18 ----- >At4g35610<---------MYB52(1)        <---------WRKY18(1)  --------->At4g35610------>ZmHOX2a(1)  <---- -------->LBD16     <---------RAP2.6(2)               <---------ARR14(2)   ----------->RAV1(2)  ----- -------LBD16      <---------At4g35610               <---------CCA1(2) --------->AtMYB61     <-------   cccggctgcaaccgttttgtaagcggctgcccatgagtttgactggtcgtagtccatatcctctgaacttagacctctcctgtgccctctttcttctgtg  20622600                                         -------->P                                         ------>MYB83                                         ------>MYB46(1)                                         >>>>>>>>>MYB98                                        <---------ALFIN1                                  <---------ARR14(2)                                              <--                        ----------->RAV1(1)                                                      ----                       <-----------------AGL1     <-----------GT1                                <--- XMIR156H              <-----------------AG------->GAMYB                                       ------ ---->ZAT14           <---------ZAT14  <---------ALFIN1                                      <------- -----ZAT14           --------->ZAT14--------->ANAC46                --------->ARR14(2)      -------- ---->REM1(2)   <-----------GT1   --------->ARR14(2)                 <---------ARR14(2)      <------- --ANAC46   --------->YAB1        <---------GLK1(1)       <----------DOF2       ----------------->AGL1   tagtccaaatgcaattttaaaccctgcaccatttggaatccccaacccaaatatactcttctttagcccaaaatccacattaaccaaaacgagaccgcgg  20622700  Previous    Next  AGI:  At5g50630.1    Description:  nodulin family protein. similar to nodulin family protein [Arabidopsis thaliana] (TAIR:AT5G50520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73867.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68316.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Nodulin-like (InterPro:IPR010658) Range:  from: 20620147    to: 20622182    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g50640.1    Description:  CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein. similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50530.1); similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79772.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68312.1); similar to unknown [Populus trichocarpa] (GB:ABK94323.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000 Range:  from: 20622444    to: 20625490    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.