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Chromosome 1
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Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
ANAC46
--------->
ANAC58
--
<----------
ID1
--------->
ANAC58
<-
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
<---------
ZAT18
<---------
HSFB2a(2)
<---------
ICU4
<---------
ZAT14
<---------
AHL20(2)
--------->
At4g35610
--------->
At4g35610
------
-------->
AHL20(2)
<----------
DOF2
--------->
WOX13(1)
--------->
SPL7
--------->
ZAT14
aattttatagaagatgggccaaaaccactttgttgacataacattgcatcaatctcatctccatccttacgctccag
ctaaacaaaacacagtgaacaaa
19772400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
GLK1(1)
------->
TEIL
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
MYB52(1)
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
TOE2(3)
<---------
AHL20(2)
<-------
TEIL
--------->
ALFIN1
------->
ARR11(3)
<---------
ARR14(2)
<---------
YAB1
--------->
At4g35610
------>
ZmHOX2a(1)
--------
ARR11(3)
--------->
AGP1
----------->
GT1
<-----------
RAV1(2)
--------->
ARR14(2)
---->
DOF2
----------->
HVH21
--------->
YAB1
<-----------
HVH21
<---------
ARR14(2)
---------
agataattttatgaatgacggatctacaagttcgaatgataaatacatac
ctcatcaggtgtatgatactctcgaatcctcgagccatcaaatagaaagc
19772500
--------->
ZAT2
--------->
At4g35610
<---------
ICU4
<--------
HAHB4
--------->
ANAC58
------>
NtERF2
<---------
ATHB12
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC46
---------->
DOF2
<---------
At4g35610
--------->
ANAC46
---
->
DOF2
<---------
ALFIN1
<---------
ANAC46
<---------
At4g35610
--------->
ANAC46
<---------
ARR11(3)
gaaatgtgttccactcgatgcctctcatcttggtgtaaagttccatcattttaagcagcttagcattccttctcacccaaaacactctaaaatcttcttc
19772600
-----
-----
----------
--------->
ANAC58
<---------
MYB59
--------->
ANAC58
<---------
ICU4
--------->
ANAC46
------->
TEIL
----------->
GT1
<---------
ANAC55(2)
--------->
ANAC58
--------->
CCA1(2)
<---------
TOE1(3)
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
ARR14(2)
<---------
TOE2(3)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
<---------------
AtSPL8
<---------
TOE2(3)
----------->
RAV1(2)
------>
ZmHOX2a(1)
----------->
GT1
----------->
GT1
<---------------
AGL15
<---------
ATHB12
------->
ID1
--------->
ANAC58
<---------
ARR14(2)
--------------->
AGL15
--------->
WOX13(1)
gtc
ctatataaatccacacaagttatgttattagtcagatatgttatatgtatgtactgaattaagaaaatgtaaggtttaaacaatcaatac
ctgaccc
19772700
<----------
DOF2
--------->
ANAC46
----------->
RAV1(1)
<---------
ETT(1)
----------->
HVH21
--------->
SPL7
<------
MYB83
<---------
DAG2
<------
MYB46(1)
<----------
DOF2
<---------
ANAC58
<-------
GAMYB
---->
TOE1(3)
<---------
ANAC58
<---------
ANAC58
---
---->
TOE2(3)
--------->
MYB59
<-----------
GT1
<---------
ANAC58
<---------
MYB46(3)
->
HVH21
<---------
MYB46(3)
<----------
DOF2
--------->
ATHB12
<---------
ZAT2
<----
ttaactttcagagtaacatgagttgggtccgacacaactttacgcttttgcccttccatcttcacttcattgcttccaactctgctcgttgttgacat
ta
19772800
--
<-
<-
---
<<<
<<<
<<<
<--
<<<
<--
<--
<--
<--
<<<
<<<
<---
<---
<---
----
<---------
WRKY18(1)
<---
--------->
AHL20(2)
--------->
YAB1
<---
<---------
AHL20(2)
<---------
ICU4
<---
<---------
ATHB12
<---------
ARR11(3)
<---
--------->
AHL20(2)
--------->
ARR11(3)
-----
<-----------
GT1
--------->
ZAT14
<-------
<---------
CCA1(1)
<---------
ZAT14
<--------
<---------
RVE1(1)
<---------
ZAT18
<------
ZmHOX2a(2)
<---------
ZAT14
------------>
CBF
--------->
ZAT14
<---------
ATHB12
------>
TOE2(3)
--------->
ARR11(3)
<---------
ZAT14
<-----------
HVH21
-----
ARR11(3)
<---------
ARR11(3)
--------->
ANAC46
--------->
ZAT6
<------
ZmHOX2a(2)
<--------
tctcaaccggtctgaacagatatttcagttctcaataaatgaatacacagaaataaacaagaacagtacagtacagatcatgaccgatcactcggcttgg
19772900
--------->
MYB52(1)
------->
At4g35610
--------
At4g35610
-----
NtERF2
--->
NtERF2
<<<<<<
AtERF-5
--------->
MYB55(2)
<<<<<<
AtERF-1
<---------
MYB46(3)
<<<<<<
AtERF-7
<---------
AtMYB61
-------
ATERF1(1)
<------
ZmHOX2a(2)
<<<<<<
AtERF-2
<---------
ARR14(3)
-------
RAP2.3(1)
--------->
ARR11(3)
<---------
ANAC46
-------
DEAR3(2)
<---------
AGP1
<---------
ANAC55(2)
-------
ERF1
--------->
AGP1
<------
MYB83
-------
RRTF1(1)
--------->
ARR14(3)
----------->
GT1
<<<<<<
AtERF-3
<-----------
ARR10
<------
MYB46(1)
<<<<<<
AtERF-4
--------->
ARR14(2)
--------->
MYB59
------
RRTF1(2)
<---------
ARR14(2)
--------->
MYB46(2)
------
RRTF1(3)
<---------
ARR11(3)
--------->
MYB111(1)
------
ATERF1(2)
--------->
ZAT14
<---------
DEAR3(1)
<---------
MYB55(1)
----->
ATERF1(2)
<---------
ZAT14
--------->
ALFIN1
<---------
MYB52(1)
------
RAP2.3(3)
<----------
DOF2
<---------
ANAC46
<-------
GAMYB
------
DEAR3(1)
<---------
DEAR3(1)
<---------
DEAR3(1)
--------->
MYB55(2)
---------->
DOF2
------
RAP2.6(2)
<---------
RAP2.6(2)
<---------
LBD16
<---------
MYB46(3)
<<<<<<<<<
ARR2
------
RAP2.3(2)
--------->
RAP2.6(3)
------>
ZmHOX2a(2)
--------->
MYB111(1)
<---------
ATHB12
---->
RAP2.6(3)
<---------
ORA47(1)
--------->
CCA1(2)
--------->
MYB111(2)
--------->
WOX13(1)
---
DOF2
--------->
ZAT18
--------->
RVE1(1)
<--------
P
--------->
MYB46(3)
-
ANAC58
--------->
ALFIN1
----------->
ARR10
--------->
ANAC58
------------>
CBF
-
ANAC58
<---------
ANAC46
---------->
DOF2
--------->
ANAC58
--------->
YAB1
--------->
YAB1
cggctcaaacggcgaagtggacggctctacagtaaagatctgcggtggttcaagcccatggttgttaggtataatggttcaacaatcaaaggcaaaacag
19773000
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC58
<---------
AtLEC2
--------->
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ANAC46
<---------
ARR14(2)
--------->
GLK1(1)
<---------
LBD16
<------
ZmHOX2a(1)
----------->
RAV1(1)
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
--------->
ANAC58
--------->
KAN4(2)
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
HSFC1(2)
--------->
CCA1(2)
--------->
ANAC46
--------->
HSFB2a(1)
--------->
AGP1
<---------
ANAC46
<---------
CCA1(2)
--------->
HSFC1(2)
<---------
ARR11(3)
--------->
At4g35610
<---------
HSFB2a(1)
--------->
ARR11(3)
<---------
At4g35610
----------------->
AG
--------->
ANAC58
<---
<---------
AGP1
<---------
ANAC58
<---------
GLK1(1)
----------->
GT1
--------->
ANAC58
<---
agattagatctaggatttggatgacttgcagcacaagcaacatatcctataaccaaaacagaaaattcctgcgcaagttacagaataagtctagggtttt
19773100
-
--
<-
<-
<-
--
--
---
<--
<---------
ARR14(2)
<---------
SPL7
===
--------->
ATHB12
--------->
ZAT6
<--
------->
GAMYB
------------------>
SPL14
<--
--------->
DEAR3(1)
----------->
HVH21
<--
--------->
ANAC46
<---------
At4g35610
---
--------->
MYB46(3)
--------->
At4g35610
====================
<---------
At5g28300
<---------
LBD16
------->
GAMYB
===
--------->
TOE1(3)
<---------
ZAT2
--------->
SPL7
<<<<<<<<<<<<<<<<<
LFY
----
--------->
ANAC46
--------->
ARR14(2)
--------->
LBD16
--------->
YAB1
--------->
At4g35610
<--
--------->
TOE2(3)
<---------
ZAT14
----------->
RAV1(1)
<---------
At4g35610
---
------
ANAC58
--------->
HSFB2a(2)
--------->
At4g35610
--------->
ZAT18
<------
NtERF2
------
------
ANAC58
<---------
HSFB2a(2)
<---------
At4g35610
<----------
ID1
<---------
MYB46(3)
<--------
cttacccttaaccgcctcgaagattggctacgactgctccggtgacagtacgaaggggacaacaataaacaatggtggctcaactgtctctctcccactc
19773200
<---------
RAP2.6(2)
<---------
At4g35610
<------
NtERF2
--------->
ATERF1(1)
<---------
MYB46(3)
<---------
RAP2.6(2)
-------->
ALFIN1
----->
MYC2
------
MYC3
------
PIF5
------
MYC2
----->
PIF5
----->
MYC3
------>
O2
-------
bZIP60(2)
====================
bZIP_DOF
-------
O2
-------
ANAC46
-------
ANAC55(2)
------>
ANAC55(2)
=======
MYC_MYB
====================
bZIP_DOF
-------->
OsbHLH66
-------
TGA1a
------>
TGA1a
<----------
DOF2
----->
HVH21
<-----------
GT1
----------------->
AGL1
-
ALFIN1
<----------
DOF2
<----------
DOF2
---------->
ID1
--------->
ALFIN1
-
acgtggtggctgcttttgggttttgatatgctcagtgtttcttttgcaaacccctcgtcgtttttaacccaaggatgaagttgggccttaatgggctgat
19773300
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AGI:
At5g48710.1
Description:
ubiquitin-related. similar to ubiquitin-related [Arabidopsis thaliana] (TAIR:AT5G48700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71030.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626)
Range:
from: 19772291
to: 19772798
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.