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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
AGP1
<---------
ANAC58
<---------
TOE2(3)
<---------
AHL20(2)
------->
YAB1
<---------
ARR14(2)
------->
AHL20(2)
<------
ZmHOX2a(2)
---------->
DOF2
<---------
GLK1(1)
-------
ATHB12
--------->
ARR11(3)
<-----------------------
TaNAC69(2)
<----------
DOF2
---->
WOX13(1)
<---------
GLK1(1)
<---------
ANAC46
--------->
GLK1(1)
-----
atcaaattttaagtttgagatctgtttttattttacttggaaacgaagaaaagtctcatacttcaattctgaaatctgttctgtttctttaaaaaaaaaa
19234700
---
<--
--------------->
AGL15
<------
MYB46(1)
---
----------->
RAV1(2)
--------->
MYB59
<-------
<-----------
GT1
--------->
ATHB12
<------
ZmHOX2a(1)
--------->
CCA1(2)
------>
ZmHOX2a(2)
<---------
YAB1
--------->
ARR11(3)
<------
ZmHOX2a(1)
<---------
ZAT6
<-----
<---------
ARR11(3)
<---------
REM1(1)
<------
MYB83
--------->
YAB1
--------->
MYB59
-
---->
MYB52(1)
<----------
TaMYB80
<---------
TOE1(2)
<---------
LBD16
<---------
ICU4
<---------
ARR14(2)
acagagaagatttaagtatatac
ctgatgtaggatcgaatgtttggttccatgggagtctctggagattgtttgataatgaagagttaggattcagattc
19234800
<----------
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
YAB1
--------->
AGP1
--------->
YAB1
<---------
ARR14(2)
<---------
ARR14(2)
-------->
RAV1(2)
<---------
AGP1
<---------
ATHB12
<-------
-------
At4g35610
--------->
ARR14(3)
--------->
ANAC58
------>
At4g35610
<---------
ARR14(3)
--------->
ANAC58
--
GLK1(2)
----------->
GT1
--------->
ARR11(3)
<---------
AHL20(2)
--
TEIL
<------
ZmHOX2a(1)
<---------
CCA1(2)
<---------
ICU4
<----------
DOF2
---------->
HVH21
----------->
GT1
----------->
ARR10
<---------
ICU4
<-----------
GT1
atctgaagaggattgtgattttgtgaaaaccctaagcttaggctcaaacctagatcttctttgcccatcatcat
gttttttatttcctttcacaagaact
19234900
<---------
YAB1
<-----------
GT1
<---------
YAB1
--------->
AHL20(1)
<----------
DOF2
<---------
AHL20(2)
--------->
ANAC55(1)
<---------
AHL20(1)
--------->
ANAC58
--------->
YAB1
--------->
ANAC46
<------
ZmHOX2a(1)
--------->
YAB1
--------->
ANAC58
<---------
LBD16
------>
ZmHOX2a(1)
---------->
DOF2
---------->
ID1
---------
--
ARR11(3)
--------->
AHL20(2)
---------->
DOF2
<---------
MYB46(3)
--------->
CCA1(2)
caacagtttcaggaattatatttccttatgagaatagagaaagaaagaacacgaaatggtttgttctttctgagatagagatgagaaatggtgtttgttt
19235000
<---
<---
<----
--------->
YAB1
--------->
ATHB12
--------->
ICU4
<---------
HSFB2a(2)
===================
--------->
HSFB2a(2)
<---------------
AtSPL8
---
<----------
DOF2
<---------
YAB1
<---------
WOX13(1)
--------->
MYB59
--------->
ICU4
--------->
AHL20(2)
<---------
YAB1
>
MYB52(2)
<------
ZmHOX2a(1)
----------->
GT1
--------->
ALFIN1
<----------
DOF2
----
caactcgaagttaggactctttgtggaagagaaatagagagagatgtgagatggtaatgaagaagagaggggattaatatagtactttgaatgatgagag
19235100
<------
NtERF2
----------->
GT1
--------->
ALFIN1
===========================================
bZIP_DOF
<---------
bZIP60(2)
--------->
TGA1a
<---------
O2
<---------
ZAT2
--------->
At4g35610
--------->
O2
--------->
ATHB12
--------->
ZAT2
--------->
ATHB51
<---------
At4g35610
<---------
ICU4
<---------
TGA1a
<---------
YAB1
>>>>>>>
GRF7
--------->
ICU4
--------->
MYB111(1)
<---------
ICU4
<-----------
RAV1(2)
<--------
HAHB4
<-----------
HVH21
--------->
YAB1
------
GLK1(2)
<---------
ATHB12
------
ARR11(3)
--------->
WOX13(1)
-----
RVE1(1)
--------->
ANAC46
<---------
===============
bZIP_DOF
--------->
ICU4
<----------
DOF2
<----------
DOF2
------>
GLK1(2)
--------->
YAB1
<----------
DOF2
<---------
DAG2
<-----------------
AGL1
----->
ARR11(3)
<-----------
GT1
*
TSS
<-----------
GT1
<-----------
HVH21
attttgtcaggtggctaattacaatccatcattatt
gtttctttgtttttggacttgtattactttatctccaacttgtgtcccccctttggcctttgcc
19235200
--------->
ANAC58
--------->
ANAC58
<----------
DOF2
------>
ZmHOX2a(1)
<-----------
GT1
<----------
DOF2
<---------
ANAC58
--------------->
AtSPL8
<----------
DOF2
<---------
ANAC58
--------->
YAB1
<----------
DOF2
------------>
CBF
---------->
ID1
<-----------
GT1
--------->
YAB1
-
DOF2
<----------
DOF2
<-----------
GT1
--------->
KAN4(2)
--------->
AtLEC2
<
atgtctttctttttgtactttctcaatatttgtgtttttctttttctttcacaaacatttttagtttattccttacaagaacccatgcataataagatgg
19235300
------->
TEIL
------->
MYC3
<----------
DOF2
<---------
ZAT14
<---------
ARR11(3)
<---------
ZAT14
---------->
DOF2
--------->
ZAT14
--------->
CCA1(2)
<---------
ZAT18
--------->
ARR11(3)
--------->
ZAT18
<---------
ARR11(3)
---------
MYB52(1)
<---------
ARR11(3)
<-------
MYC3
<---------
ANAC46
>>>>>>>>>>>>>>>>>
LFY
--
cagtttgtccaaaacaaataagatggccaatatgttttcaagtgtacacatgtatatgtgttttgtgtctgaagatttaaagccaatgtctttaaaacca
19235400
--------->
SPL7
--------->
ZAT6
<---------
PCF5
--------->
ZAT18
--------->
LBD16
--------->
ANAC46
--------->
HSFB2a(2)
<-------
TEIL
--------->
ANAC58
<---------
LBD16
---------->
DOF2
--------->
YAB1
--------->
ANAC58
------->
YAB1
<---------
ALFIN1
<---------
ANAC55(2)
--------->
MYB52(1)
<---
atagaaatgtccggaccactctgagaaagtaatctacaattaagtgaatcatcaaggtgcgatgttttttgtatatggataacgcaatttgcactacttg
19235500
<--------
<-----------
TGA1
--------->
TGA1a
--------->
bZIP60(2)
--------->
ANAC58
--------->
ANAC55(2)
--------->
SPL7
--------->
ANAC55(1)
--------->
TOE2(1)
--------->
ANAC46
--------->
TOE1(1)
<---------
O2
--------->
YAB1
--------->
ANAC58
<---------
ICU4
==============
<---------
CCA1(2)
<--------
ATHB1
<-------
TEIL
----
------>
ZmHOX2a(2)
<---------
ATHB12
----------------------->
TaNAC69(2)
<---------
YAB1
<---------
ATHB51
---------->
ID1
--------->
O2
-
--------->
YAB1
----------->
GT1
--------------->
AtSPL3
<---------------
AtSPL8
------
ZAT6
<---------
ARR11(3)
---------->
DOF2
--------->
ICU4
<---------
MYB52(1)
<-----------
STF1
tgttaattttcatgatccatatcatgtagtatgtctcaaagttgataaatacaataattctcgtacttcgttttgtcttaatcaagtacacgtcattata
19235600
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AGI:
At5g47370.1
Description:
HAT2; transcription factor. Identical to Homeobox-leucine zipper protein HAT2 (HAT2) [Arabidopsis Thaliana] (GB:P46601;GB:Q546H4;GB:Q9LVS2); similar to HAT1 (homeobox-leucine zipper protein 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17460.1); similar to homeobox-leucine zipper protein, putative [Brassica oleracea] (GB:ABD64984.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-associated;
Range:
from: 19233539
to: 19235136
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.