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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ANAC58
<---------
bZIP60(1)
------>
MYB46(1)
--------->
bZIP60(1)
<------
NtERF2
<---------
GLK1(2)
--------->
ANAC58
----
ZmHOX2a(1)
--------->
YAB1
--------->
TOE2(3)
<---------
GLK1(2)
--------->
ANAC58
>
RAV1(1)
------>
MYB83
----------->
GT1
<-----------
GT1
--------->
ANAC46
----------->
GT1
<--
ggaggcaaaccaatctctctcatattcttgtaaaacttaaatgccaaatttaactgattctcttccacgagaatggcaagaacagtgacataagccttct
18712600
----
--------->
TOE2(3)
<---
--------->
YAB1
<----
<---------
ATHB12
------
<<<<<<<<<
ARR2
<-----
======================
HOX2a_HOX2a
---------->
DOF2
--------->
ANAC58
<------
ZmHOX2a(2)
----------->
GT1
--------->
MYB52(1)
--------->
AtMYB61
--------->
ANAC58
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
TOE2(3)
<---------
ETT(1)
---------->
DOF2
-------
STY1(2)
<---------
ARR11(3)
--------->
TOE1(3)
------->
TEIL
--------->
ANAC46
<-----
ggctaggatcacaatcaaaatccttcattttgtgaaaaacccttaaagaatcaaacggcctatgaacccgaccataccctcgacatatcgaaagcaatat
18712700
--------->
At4g35610
--------->
ZAT2
<---------
ZAT2
<---------
At4g35610
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<-----------
ARR10
--------->
ARR14(2)
--------->
AGP1
<---------
ARR14(3)
--------->
ARR14(3)
<---------
GLK1(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
TOE2(3)
--------->
MYB46(3)
<---------
ARR14(2)
--------->
TOE1(3)
----->
ARR11(3)
<---------
ARR11(3)
-------->
P
------
ARR11(3)
<---------
CCA1(2)
------>
MYB46(1)
-----
CCA1(2)
----------->
ARR10
------>
MYB83
--->
AHL20(1)
--------->
WOX13(1)
--------->
At4g35610
----
ARR11(3)
--------->
MYB46(3)
--------->
ICU4
--------->
AtMYB61
----
----
AHL20(1)
--------->
YAB1
--------->
YAB1
<----------
DOF2
<---------
MYB59
<--------
atcttcactaacaacacaattctcaatcttcattctaacaatcagatcttcagctgctttgaacttattagcagagaccaacctcaagaccatataacca
18712800
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
--------->
ANAC55(2)
<---------
SPL7
<---------
ARR14(2)
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
<---------
ANAC46
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
ANAC58
<-------
GAMYB
<---------
ANAC58
------>
NtERF2
<-------
TEIL
<---------
ANAC46
--------------->
AtSPL8
<---------
MYB46(3)
--------->
ANAC58
--------------->
AtSPL3
--------->
DEAR3(1)
--------->
ZAT2
<---------------
AtSPL3
--------->
LBD16
--------->
At4g35610
<---------
GLK1(1)
<---------
ANAC58
<---------
ZAT2
<---------
ARR11(3)
<-----------------
AGL1
<---------
LBD16
<---------
At4g35610
--------->
ARR11(3)
------->
TEIL
--------->
ARR14(2)
<----------
DOF2
------>
DOF2
------->
TEIL
<---------
ANAC58
--------->
LBD16
<---------
ARR11(3)
---
---
GT1
<---------------
AtSPL8
<---------
LBD16
--------->
YAB1
<---------
ALFIN1
--------->
ANAC58
aaagaactctgatcatgtacgtacccatttgcgtattccgccgttgcggaatcaaaaactgccatagacttctccacatctttttcagctcgcatcagtt
18712900
----------->
RAV1(1)
--------------->
AGL15
<---------
WRKY18(1)
=======================
<---------
ANAC58
<---------------
AGL15
<---------
ANAC46
------>
MYB83
--------->
REM1(2)
--------->
WRKY38(1)
------>
MYB46(1)
----------->
HVH21
--------->
WRKY45
<-----------
GT1
<
<-----------
HVH21
----------->
HVH21
--------->
YAB1
<
--------->
TOE1(2)
--------->
WRKY12
<---------
YAB1
<-
--------->
TOE2(2)
<----------
DOF2
<----------
DOF2
<---------
ATHB12
---------->
DOF2
------>
YAB1
<---------
ANAC58
<---------
ICU4
------------>
CBF
------------>
CBF
<----
tgataacctgtgaaggcgtgatgttctttgaccacttgaacatcatcactttgctacccat
tactaaacaatgataccttccaacaatagcaaagaatac
18713000
--------->
ANAC58
<---------
At4g35610
--------->
GLK1(2)
<---------
YAB1
<---------
ZAT2
<-----------
TBP
--------->
ZAT2
===============
MADS_MADS
--------->
ANAC58
---------->
DOF2
---------------
AGL15
--------->
At4g35610
<---------
ANAC58
------>
MYB83
----------
DOF2
<-----------
ARR10
<---------
ANAC46
>>>>>>>>>>
MYB80
--------
DAG2
<---------
GLK1(2)
<---------
ANAC58
<---------
YAB1
------>
MYB46(1)
-------
GT1
----------->
ARR10
<---------
ANAC46
<---------------------
WRI1
----
acctttttatagagaagaatctcagctacgcattacgtcgaacaggttgtgtgcataaacgatttcgataggctcaaaccaaatgaaagaaacacagacc
18713100
--
<--
---
<------
NtERF2
--------->
LBD16
----------->
RAV1(1)
--------->
ETT(1)
--------->
DAG2
<---------
LBD16
--------->
TOE2(2)
--------->
ANAC58
--------->
MYB52(1)
<---------
ARR11(3)
---------->
DOF2
------------>
CBF
<------------
CBF
--------->
ARR11(3)
<---------
HSFB2a(2)
------->
TEIL
--------->
YAB1
-----
--------->
ATHB12
--------->
TOE1(2)
--------->
ANAC58
--------->
WOX13(1)
<--
------->
GT1
------>
ZmHOX2a(2)
--------->
HSFB2a(2)
--------->
YAB1
----------->
GT1
<---------
ANAC46
agaaaaatcatttgatcttcaaaacatacgagttccaaaagtgaaggaagcaacaatgaaactcgttacgaactagaaggttaatcaaattgccggagaa
18713200
<
--------------->
AGL15
-
----------------->
AGL2
--
----------------->
AGL3
--------
<-----------------
AGL1
--------
==============================================================================================
<-----------------
AG
--------
------->
GLK1(2)
----------->
HVH21
-------
ARR14(2)
---------->
DOF2
---------------
------>
ARR14(2)
--------->
At4g35610
<---------
HSFB2a(2)
<--------------
------>
ARR10
<---------
At4g35610
--------->
HSFB2a(2)
<---------------
-------
GLK1(2)
<----------
DOF2
----------->
ARR10
--------->
ALFIN1
-----
gaatcgctcaccagttttggctagggtttatgaaatgggagactttagctgcaaagagaagagtctctggacgatttagagggtgtctctctaacaggca
18713300
<-------
TEIL
---------------
AtSPL8
-------------->
AtSPL8
-------->
DOF2
->
ANAC46
<---------
TOE2(3)
->
ANAC58
<-----------
GT1
<---------
TOE1(3)
=
MADS_MADS
<-----------
GT1
---------->
DOF2
->
ANAC58
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
>
AGL15
--------->
AHL20(2)
------>
MYB83
---------->
DOF2
<---------
AHL20(2)
-
AGL15
<---------
YAB1
<---------
MYB59
--------->
ANAC55(2)
<---------
AHL20(1)
--------->
AHL20(2)
--
AGL1
<---------
AHL20(2)
------>
MYB46(1)
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
YAB1
------>
RAV1(1)
<<<<<<<<<
GT-1
<---------
ANAC55(1)
<---------
AHL20(2)
<---------
ICU4
acaaagtacatattattacagtattaaccaaatttaaacgaattaagtgtcaacaaaagcttatataaaaaatttaaagtttaaaaattataaaatatgt
18713400
------>
MYB46(1)
------>
MYB83
<---------
ICU4
<---------
MYB46(2)
-------->
ATHB1
<---------
MYB111(1)
--------->
YAB1
<---------
MYB59
<---------
AHL20(2)
--------->
ANAC46
<
<---------
YAB1
--------->
ANAC58
<
--------->
AHL20(2)
--------->
ANAC58
-
--------->
AHL20(1)
------->
TEIL
-
--------------->
AtSPL8
<---------
AHL20(2)
<
<---------------
AtSPL8
<---------
ARR11(3)
-
<---------
AHL20(1)
--------->
ICU4
<---------
AHL20(2)
<-
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<-
<---------
ARR11(3)
--------->
ANAC46
<---------
AHL20(1)
--
--------->
AHL20(1)
<---------
YAB1
--------->
AHL20(1)
<---------
TOE2(3)
--
--------->
YAB1
--------->
ICU4
<------
ZmHOX2a(2)
--------->
ARR11(3)
---------->
DOF2
------
caacaatattttagtacttaaaattattatgcgaaatatttagatcaatggactactcatctaatatatttgcacctaattttaaagtataaattcaacc
18713500
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AGI:
At5g46100.1
Description:
pentatricopeptide (PPR) repeat-containing protein. similar to EMB1025 (EMBRYO DEFECTIVE 1025) [Arabidopsis thaliana] (TAIR:AT4G20090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64138.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:
from: 18711543
to: 18712961
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.